CV884545

Overview
NameCV884545
Unique NameCV884545
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length478
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: FRMA_ECOK1 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=frmA PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 3.709e-51
Identity = 95/159 (59.75%), Postives = 121/159 (76.10%), Query Frame = -2
Query:    1 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 477
            H+MG STFS+YTVV +VS+AKI+P+A  + VCLLGCGV TG+GAV NTAKV+PG  VAVFGLG +            A R+I ID +PKKF+ A+ FG T+ +NP D+DKPI+ VL+D+   G+D++FECIGNV+VMRAALE  H+GWG SVI+GVA S
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGS 292          
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 200.29 bits (508), Expect = 3.709e-51
Identity = 100/161 (62.11%), Postives = 121/161 (75.16%), Query Frame = -2
Query:    1 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKD-HDK-PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 477
            HFMGTSTF++YTVV D+S+ KI+ +APL+KVCLLGCG+ TG GA  NTAKVE GS  AV+GLG V            A ++ GIDI+P KF+ AK FG T+FVNPKD  DK  IQ  L+DLTDGG DY+FECIGNV+ MR+ALE  HKGWGTSV++GVA +
Sbjct:  142 HFMGTSTFAEYTVVADISLTKINEKAPLEKVCLLGCGISTGYGAALNTAKVEAGSTCAVWGLGAVGLAVGLGCKKAGAGKIYGIDINPDKFELAKKFGFTDFVNPKDVADKGSIQNYLIDLTDGGFDYTFECIGNVNTMRSALEATHKGWGTSVVIGVAGA 302          
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 3.709e-51
Identity = 104/160 (65.00%), Postives = 116/160 (72.50%), Query Frame = -2
Query:    7 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNP-KD--HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 477
            HFMGTSTFSQYTV+ ++S   +   APLDKVCLLGCG+ TG GA   TAKVE GS VA+FGLG V            A R+IGID +  KF   K+FG TEF+NP KD    K IQQ LVD+TDGGVDYSFECIGNV+VMRAALECCHKGWG S IVGVA
Sbjct:  141 HFMGTSTFSQYTVLPEISCCVVREDAPLDKVCLLGCGITTGFGAAKITAKVEEGSTVAIFGLGAVGLSVAQGAVDCGAKRIIGIDNNETKFGPGKDFGCTEFINPSKDLPEGKTIQQHLVDITDGGVDYSFECIGNVNVMRAALECCHKGWGVSTIVGVA 300          
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: ADH1_ARATH (Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 3.709e-51
Identity = 95/156 (60.90%), Postives = 114/156 (73.08%), Query Frame = -2
Query:   10 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 477
            HF+GTSTFS+YTVVH   VAKI+P APLDKVC++ CG+ TGLGA  N AK + G  VA+FGLG V            ASR+IG+D + K+FD+AK FGVTE VNPKDHDKPIQQV+ ++TDGGVD S EC G+V  M  A EC H GWG +V+VGV
Sbjct:  142 HFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLSTGLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVTECVNPKDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGV 297          
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: FRMA_PASPI (S-(hydroxymethyl)glutathione dehydrogenase OS=Pasteurella piscicida GN=frmA PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 6.326e-51
Identity = 95/159 (59.75%), Postives = 121/159 (76.10%), Query Frame = -2
Query:    1 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 477
            H+MG STFS+YTVV +VS+AKI+PQA  ++VCLLGCGV TG+GAV NTAKV+ G  VAVFGLG +            A R+  ID +P KF+ AK FG T+ +NP D+DKP+QQVLV++T  GVD++FECIGNV+VMR+ALE  H+GWG SVI+GVA +
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPQANAEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGGIGLAVVQGARQAKAGRIFAIDTNPSKFELAKQFGATDCINPNDYDKPVQQVLVEMTKWGVDHTFECIGNVNVMRSALESAHRGWGQSVIIGVAGA 292          
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: ADH1_PENAM (Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 6.326e-51
Identity = 93/156 (59.62%), Postives = 116/156 (74.36%), Query Frame = -2
Query:   10 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 477
            HF+GTSTFS+YTV+H   VAKI+P+APLDKVC+L CG+ TGLGA  N AK   GS VA+FGLG V            ASR+IG+D++P +F+ AK FG TEFVNPKDH+KP+Q+VL D+T+GGVD S EC GN++ M  A EC H GWG +V+VGV
Sbjct:  142 HFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEAKKFGCTEFVNPKDHNKPVQEVLADMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGV 297          
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: FRMA_ECOSM (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 8.262e-51
Identity = 95/159 (59.75%), Postives = 120/159 (75.47%), Query Frame = -2
Query:    1 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 477
            H+MG STFS+YTVV +VS+AKI+P+A  + VCLLGCGV TG+GAV NTAKV+P   VAVFGLG +            A R+I ID +PKKFD A+ FG T+ +NP D+DKPI+ VL+D+   G+D++FECIGNV+VMRAALE  H+GWG SVI+GVA S
Sbjct:  134 HYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPDDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGS 292          
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.079e-50
Identity = 93/156 (59.62%), Postives = 115/156 (73.72%), Query Frame = -2
Query:   10 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 477
            HF+GTSTFS+YTVVH   VAKI+P APLDKVC+L CG+ TGLGA  N AK +PGS VA+FGLG V            ASR+IG+D+   +F+ AK FGV EFVNPKDHDKP+QQV+ ++TDGGVD + EC G++  M +A EC H GWG +V+VGV
Sbjct:  143 HFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARMSGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHDKPVQQVIAEMTDGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGV 298          
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: ADH1_ZEALU (Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurians GN=ADH1 PE=3 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 1.409e-50
Identity = 93/156 (59.62%), Postives = 116/156 (74.36%), Query Frame = -2
Query:   10 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 477
            HF+GTSTFS+YTV+H   VAKI+PQAPLDKVC+L CG+ TGLGA  N AK   GS VAVFGLG V            ASR+IG+D++P +F+ A+ FG TEFVNPKDH+KP+Q+VL ++T+GGVD S EC GN++ M  A EC H GWG +V+VGV
Sbjct:   69 HFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEARKFGCTEFVNPKDHNKPVQEVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGV 224          
BLAST of CV884545 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 4.101e-50
Identity = 93/156 (59.62%), Postives = 114/156 (73.08%), Query Frame = -2
Query:   10 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 477
            HF+GTSTFS+YTV+H   VAKI+P APLDKVC+L CG+ TGLGA  N AK   GS VA+FGLG V            ASR+IGID++  +F+ A+ FG TEFVNPKDHDKP+QQVL ++T+GGVD S EC GN++ M  A EC H GWG +V+VGV
Sbjct:  142 HFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGV 297          
The following BLAST results are available for this feature:
BLAST of CV884545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
FRMA_ECOK13.709e-5159.75S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
ADHX_DROME3.709e-5162.11Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADHX_DICDI3.709e-5165.00Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADH1_ARATH3.709e-5160.90Alcohol dehydrogenase class-P OS=Arabidopsis thali... [more]
FRMA_PASPI6.326e-5159.75S-(hydroxymethyl)glutathione dehydrogenase OS=Past... [more]
ADH1_PENAM6.326e-5159.62Alcohol dehydrogenase 1 OS=Pennisetum americanum G... [more]
FRMA_ECOSM8.262e-5159.75S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
ADH1_TRIRP1.079e-5059.62Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
ADH1_ZEALU1.409e-5059.62Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurian... [more]
ADH1_ORYSJ4.101e-5059.62Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008B05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884545 ID=CV884545; Name=CV884545; organism=Citrus sinensis; type=EST; length=478bp
TGATGCAGCAACACCCACAATAACTGATGTTCCCCAGCCCTTGTGACAGC
ATTCCAAAGCTGCCCTCATCACAGAGACATTGCCAATGCATTCAAAACTA
TAGTCAACACCACCATCCGTGAGATCGACAAGGACCTGCTGAATGGGTTT
GTCATGGTCCTTGGGATTTACAAATTCAGTAACTCCAAAATTCTTTGCTC
TATCAAACTTTTTTGGGTCAATATCTATACCAATAACACGTGAAGCTCCA
GCTGCCTTTGCACCCTCTGCCACAGCAAGGCCAACAGTCCCAAGGCCAAA
AACAGCAACTATAGAACCCGGCTCTACTTTTGCAGTGTTCCAAACTGCTC
CAAGACCAGTAGGAACACCACAGCCAAGAAGGCATACTTTGTCCAAAGGA
GCTTGTGGGTCAATCTTTGCAACACTAACATCATGCACAACTGTGTACTG
GCTAAATGTTGAGGTTCCCATGAAGTGA
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