CV884532
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884532 vs. ExPASy Swiss-Prot
Match: PSB3_DROME (Proteasome subunit beta type-3 OS=Drosophila melanogaster GN=Prosbeta3 PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.861e-49 Identity = 90/171 (52.63%), Postives = 125/171 (73.10%), Query Frame = -1 Query: 387 IATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 896 I+TDF+++ I R+F+GL+GL TD T+ RL+FR LY+ RE R+M P+ F++++S+ LYE RFGPYF +PV+AGL + +PFIC MD IG DFVVAGT E LYG CE ++KPD+EPD+LFE ++Q+++++ DRD +SGWG VYI+ +I ER LK RMD Sbjct: 35 ISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIGCPNAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYIIEKDKITERTLKTRMD 205
BLAST of CV884532 vs. ExPASy Swiss-Prot
Match: PSB3_BOVIN (Proteasome subunit beta type-3 OS=Bos taurus GN=PSMB3 PE=1 SV=3) HSP 1 Score: 194.512 bits (493), Expect = 6.861e-49 Identity = 95/171 (55.56%), Postives = 129/171 (75.44%), Query Frame = -1 Query: 387 IATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 896 + TDFQ+I + DRL+IGL+GLATD QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPFIC++D IG + DFVV+GT E +YG CE++++P+M+P+ LFET+SQA+L++VDRD +SG G V+I+ +I R LK RMD Sbjct: 35 VTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDFVVSGTCTEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDKITTRTLKARMD 205
BLAST of CV884532 vs. ExPASy Swiss-Prot
Match: PSB3_YEAST (Proteasome component PUP3 OS=Saccharomyces cerevisiae GN=PUP3 PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.749e-44 Identity = 85/171 (49.71%), Postives = 126/171 (73.68%), Query Frame = -1 Query: 387 IATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 896 ++ F++I + +F+G++GLATD TL + ++ LY+L+EER ++PETF LVS+ LYE+RFGPYF PV+AG++ + KPFI D IG + AKDF+V+GTA + L+G CE++++P++EP++LFET+SQALL++ DRD LSGWG VYI+ E+ +R LK R D Sbjct: 36 VSNKFEKIFH-YGHVFLGITGLATDVTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAVVYIIKKDEVVKRYLKMRQD 205
BLAST of CV884532 vs. ExPASy Swiss-Prot
Match: PSB3_CAEEL (Proteasome subunit beta type-3 OS=Caenorhabditis elegans GN=pbs-3 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.480e-43 Identity = 75/170 (44.12%), Postives = 120/170 (70.59%), Query Frame = -1 Query: 387 IATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 896 IATD +++ K+ D++++GL+G +D++T+ ++++FR LY+LRE R++KP+ + ++S L Y+ RFG YF +P++AGL D +KP+IC MD+IG +DFV GT E L G CE ++ +M+PDELFE +Q++LS ++RD SGWG VY +T ++ +K RMD Sbjct: 35 IATDQKKVHKVTDKVYVGLAGFQSDARTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAASGWGAVVYTITKDKVNVSTIKARMD 204
BLAST of CV884532 vs. ExPASy Swiss-Prot
Match: PSB3_TRYBB (Proteasome subunit beta type-3 OS=Trypanosoma brucei brucei GN=PSB3 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.297e-39 Identity = 80/171 (46.78%), Postives = 121/171 (70.76%), Query Frame = -1 Query: 387 IATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 896 I+ + ++ I+D + +GL+GL TD QT Q++ FR ++Y+LREERD+ + FA+LVS++LYE RFGP+F +PVI + + + ++C D IGA +D+V AGT ESL+G CEA+++P +EP+ELFE +QA+LS+ DRD LSG+G IVT ++ R++KGR D Sbjct: 35 ISMEVPKLHVINDGIVMGLTGLRTDQQTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVYLCATDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLEPEELFEVAAQAMLSACDRDSLSGYGAVAAIVTKDKLVTRLIKGRKD 205
BLAST of CV884532 vs. ExPASy Swiss-Prot
Match: PSB3_GIALA (Proteasome subunit beta type-3 OS=Giardia lamblia GN=PRSBETA3 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.835e-32 Identity = 61/150 (40.67%), Postives = 95/150 (63.33%), Query Frame = -1 Query: 432 QRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIV 881 +RI ++ +GL+GL TD T Y+++ + LY L+E+R+++P A ++S+ LY+ RFGPYF P+IAG + KP++ MD+IG + +F +AGTA + L G CE KPDM DE+ + Q + S+ +RD SGWG HV ++ Sbjct: 42 ERIFRLSQSCLLGLAGLQTDVLTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAYSGWGAHVVVL 191
BLAST of CV884532 vs. ExPASy Swiss-Prot
Match: PSMB_ARCFU (Proteasome subunit beta OS=Archaeoglobus fulgidus GN=psmB PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.482e-15 Identity = 52/154 (33.77%), Postives = 78/154 (50.65%), Query Frame = -1 Query: 420 QRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTE 881 ++I +I DR+ + +G D+Q L + + LY++R ER A+L S LL R+ PY Q +I G+ E K I ++D IG KD V G+ + YG E F P++ DE E +A+ S++ RD SG G V +T E Sbjct: 43 KKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKS-IYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKITEDE 195
BLAST of CV884532 vs. ExPASy Swiss-Prot
Match: PSMB_METJA (Proteasome subunit beta OS=Methanocaldococcus jannaschii GN=psmB PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.217e-14 Identity = 44/156 (28.21%), Postives = 81/156 (51.92%), Query Frame = -1 Query: 414 QRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIK 881 +++ KI D + + ++G D+Q + + L+ KLY++R R++ P A+L+S +L+ R P+ Q +I G + + ++D +G K F G+ YG EA + DM +E + AL S+++RD SG G + ++T +K Sbjct: 38 KKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVITKDGVK 193
BLAST of CV884532 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.329e-11 Identity = 47/158 (29.75%), Postives = 80/158 (50.63%), Query Frame = -1 Query: 420 ATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTE 893 ATD +I KI + + ++G D+Q+L + L LY++R + E A+L + +L+ RF P+ Q ++ G+ DE+ I ++D G + FV G+ YG E + ++ DE + +A+ S+++RD SG G V VT E Sbjct: 39 ATD--KIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGV-DENGAKIYSLDPSGGM-IPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTYSGNGILVATVTEEE 192
BLAST of CV884532 vs. ExPASy Swiss-Prot
Match: PB6LB_SALSA (Proteasome subunit beta type-6-B like protein OS=Salmo salar GN=psmb6l-b PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11 Identity = 38/161 (23.60%), Postives = 82/161 (50.93%), Query Frame = -1 Query: 396 RISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKG 878 ++ ++HDR+F ++G D+Q + + F+ + ++ E + AS++ L Y + + AG + P + T+ ++G L++ F + G+ +YG +A +KPDM +E + + AL ++ RD +SG H+ ++T ++ ++ G Sbjct: 50 KLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTV-ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHLVVITEEGVEHVVIPG 208 The following BLAST results are available for this feature:
BLAST of CV884532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884532 ID=CV884532; Name=CV884532; organism=Citrus sinensis; type=EST; length=896bpback to top |