CV884532
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884532 vs. ExPASy Swiss-Prot
Match: PSB1_HUMAN (Proteasome subunit beta type-1 OS=Homo sapiens GN=PSMB1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11 Identity = 49/184 (26.63%), Postives = 81/184 (44.02%), Query Frame = -1 Query: 387 DFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKP-----------------DMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 887 D + K+ D+ IG SG D TL + + R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D +G+ + +D AG G+ AM +P + D V +S+ +RD +G + IVT I+E + R D Sbjct: 67 DSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241
BLAST of CV884532 vs. ExPASy Swiss-Prot
Match: PB6LA_SALSA (Proteasome subunit beta type-6-A like protein OS=Salmo salar GN=psmb6l-a PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11 Identity = 38/161 (23.60%), Postives = 81/161 (50.31%), Query Frame = -1 Query: 396 RISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKG 878 ++ ++HDR+F ++G D+Q + + F+ + ++ E + AS++ L Y + + AG + P + T+ ++G L++ F + G+ +YG +A +KPDM +E + AL ++ RD +SG H+ ++T ++ ++ G Sbjct: 50 KLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTV-ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALAMGRDNVSGGVAHLVVITEEGVEHVVIPG 208
BLAST of CV884532 vs. ExPASy Swiss-Prot
Match: PSB1_MOUSE (Proteasome subunit beta type-1 OS=Mus musculus GN=Psmb1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11 Identity = 49/184 (26.63%), Postives = 82/184 (44.57%), Query Frame = -1 Query: 387 DFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 887 D + K+ D+ IG SG D TL + + R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D +G+ + +D AG G+ AM +P ++ D V +S+ +RD +G + IVT I+E + R D Sbjct: 66 DSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240 The following BLAST results are available for this feature:
BLAST of CV884532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884532 ID=CV884532; Name=CV884532; organism=Citrus sinensis; type=EST; length=896bpback to top |