CV884526

Overview
NameCV884526
Unique NameCV884526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIH_NEUCR (Peptidyl-prolyl cis-trans isomerase H OS=Neurospora crassa GN=cyp-3 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.215e-43
Identity = 96/169 (56.80%), Postives = 109/169 (64.50%), Query Frame = -2
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEK-FPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE---AEGRQNGTPKSKVVVADSGE 791
            V+FD+ + G+P GRI   LF   VP+TAENFR  CTGE      G+P  YKGS FHRIIP+FM Q              IYG K F DENF LKH  PGLLSMANAGP+TNGSQFFITTV T +LDG+HVVFGKV+ GMDVV K+E      R    P   VV+A  GE
Sbjct:   14 VFFDITLGGEPLGRITFELFKDVVPRTAENFRQFCTGESK-NNLGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIYGTKSFADENFLLKHDTPGLLSMANAGPNTNGSQFFITTVPTPFLDGKHVVFGKVVDGMDVVKKMENTKTGYRGKDVPNLDVVIAQCGE 181          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIE_SCHMA (Peptidyl-prolyl cis-trans isomerase E OS=Schistosoma mansoni PE=1 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 3.779e-43
Identity = 88/166 (53.01%), Postives = 111/166 (66.87%), Query Frame = -2
Query:  297 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 794
            +V+FD+ I    AGRIVM L    VP+TAENFRALCTGE+G G       Y    FHR+IP FM Q           G+SIYG KF DENF+L+H G G+LSMAN+GP+TNGSQFFI T    WLDG+HVVFG+V+ G +VV K+E+ G ++G  K  V+++  GE
Sbjct:  113 RVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPVIISRCGE 271          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PAL4B_HUMAN (Peptidylprolyl cis-trans isomerase A-like 4B OS=Homo sapiens GN=PPIAL4B PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.100e-42
Identity = 88/169 (52.07%), Postives = 107/169 (63.31%), Query Frame = -2
Query:  297 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 803
            + + V+FD+ + GKP GRI + LF   + KTAENFRAL TGEKG         YKGS FHRIIP FM Q            +SIYGEKF DEN   KHTG G+LSMANAGP+TNGSQFFI    T WLDG+HV FGKV   +++V  +E  G +N     K+ +AD G+
Sbjct:    2 VNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGF-------RYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIH_GIBZE (Peptidyl-prolyl cis-trans isomerase H OS=Gibberella zeae GN=CYP3 PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 96/169 (56.80%), Postives = 108/169 (63.91%), Query Frame = -2
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEK-FPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEG---RQNGTPKSKVVVADSGE 791
            V+FD+ I G+P GRI   LF   VPKTAENFR  CTGE      G+P  YKGS FHRIIP+FM Q              I+G K F DENF LKH  PGLLSMANAGP+TNGSQFFITTV T +LD +HVVFGKV  GMDVV K+EA     R    P   VV++  GE
Sbjct:   14 VFFDITIGGEPLGRITFELFKDVVPKTAENFRQFCTGESKT-PVGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIWGFKSFEDENFTLKHDQPGLLSMANAGPNTNGSQFFITTVPTPFLDNKHVVFGKVFEGMDVVKKMEATKTGYRGKDMPNLDVVISQCGE 181          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIH_CRYNE (Peptidyl-prolyl cis-trans isomerase H OS=Cryptococcus neoformans GN=CYP3 PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 90/166 (54.22%), Postives = 109/166 (65.66%), Query Frame = -2
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 791
            V+FD+ I   PAGRI M LF    PKTAENFR LCTGE  I  +  P  YK +TFHR+IP FM+Q             SIYG +F DENFK+KHTGPGLLSMAN+GP+TNG QFFITT    +LDG+H VFG+V+ G+  V K+E      N  PK +V +A+ GE
Sbjct:   15 VFFDISIGDTPAGRIKMELFDDITPKTAENFRQLCTGEHRI--NSVPQGYKKATFHRVIPQFMVQGGDFVRGDGTGSFSIYGAQFEDENFKVKHTGPGLLSMANSGPNTNGCQFFITTAPAEFLDGKHCVFGRVIDGLLTVRKIENVPTGANNRPKLQVRIAECGE 178          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: CYPH_ENCCU (Peptidyl-prolyl cis-trans isomerase OS=Encephalitozoon cuniculi GN=CPR1 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 94/172 (54.65%), Postives = 110/172 (63.95%), Query Frame = -2
Query:  300 KEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKS--KVVVADSG 809
            KE +  VYFDV    +  GRIVM L    VPKTA+NFR LC   KG G       YKGSTFHRIIP FM+Q           G SIYGEKFPDENF+LKHT  G+LSMAN G  TNGSQFFIT   T WLD +HVVFG+V+ GMDVV+K+   G ++G  K   ++ + D G
Sbjct:    3 KEASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEG-------YKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQVKKGYRIEIRDCG 167          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIH_HUMAN (Peptidyl-prolyl cis-trans isomerase H OS=Homo sapiens GN=PPIH PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.449e-42
Identity = 89/174 (51.15%), Postives = 108/174 (62.07%), Query Frame = -2
Query:  297 NLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 815
            N   +   V+FDV I G+  GR+ + LF   VPKTAENFR  CTGE    K G P+ YKGSTFHR+I  FM+Q             SIY   F DENFKL+H+ PGLLSMAN+GP TNG QFFIT     WLDG+HVVFGK++ G+ V+ K+E      N  PK  VV++  GE
Sbjct:    5 NSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGE 176          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIH_BOVIN (Peptidyl-prolyl cis-trans isomerase H OS=Bos taurus GN=PPIH PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.449e-42
Identity = 89/174 (51.15%), Postives = 108/174 (62.07%), Query Frame = -2
Query:  297 NLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 815
            N   +   V+FDV I G+  GR+ + LF   VPKTAENFR  CTGE    K G P+ YKGSTFHR+I  FM+Q             SIY   F DENFKL+H+ PGLLSMAN+GP TNG QFFIT     WLDG+HVVFGK++ G+ V+ K+E      N  PK  VV++  GE
Sbjct:    5 NSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGE 176          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIA_PARPR (Peptidyl-prolyl cis-trans isomerase OS=Paramecium primaurelia PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.199e-42
Identity = 88/164 (53.66%), Postives = 104/164 (63.41%), Query Frame = -2
Query:  300 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSG 791
            V+FDV+  G    +IV  L+   VPKTA NFR L TG +G G       YKGS FHR+I  FM Q           G+SIYGEKF DENFKLKHT P LLSMANAGP+TNGSQFFIT V   WLDG+HVVFG+V+ G D +   +    Q G PK+ + + DSG
Sbjct:    4 VFFDVQFGGDAPKKIVFKLYDDVVPKTAANFRELATGSRGFG-------YKGSVFHRVITDFMAQGGDFTNFNGTGGKSIYGEKFADENFKLKHTKPALLSMANAGPNTNGSQFFITFVPCPWLDGKHVVFGEVVDGFDTLELFKKNSSQQGKPKTTIKIVDSG 160          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: RBP2_BOVIN (E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos taurus GN=RANBP2 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 5.457e-42
Identity = 89/171 (52.05%), Postives = 107/171 (62.57%), Query Frame = -2
Query:  297 KEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 809
            KE    V+FD+    +P GRI M LF   VPKTAENFRALCTGEKG G       +K S FHR+IP F+ Q           G SIYG+KF DENF +KHTGPGLLSMAN G DTN SQFFIT      LD +HVVFG V  GMD V K+E+ G   G+   ++++ + G+
Sbjct:  921 KETNPVVFFDICADDEPLGRITMELFSNIVPKTAENFRALCTGEKGFG-------FKSSIFHRVIPDFVCQGGDITKHDGTGGRSIYGDKFEDENFDVKHTGPGLLSMANRGQDTNNSQFFITLKKAERLDFKHVVFGFVKDGMDTVKKIESFGSPKGSVSRRIIITECGQ 1084          
The following BLAST results are available for this feature:
BLAST of CV884526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
PPIH_NEUCR2.215e-4356.80Peptidyl-prolyl cis-trans isomerase H OS=Neurospor... [more]
PPIE_SCHMA3.779e-4353.01Peptidyl-prolyl cis-trans isomerase E OS=Schistoso... [more]
PAL4B_HUMAN1.100e-4252.07Peptidylprolyl cis-trans isomerase A-like 4B OS=Ho... [more]
PPIH_GIBZE1.876e-4256.80Peptidyl-prolyl cis-trans isomerase H OS=Gibberell... [more]
PPIH_CRYNE1.876e-4254.22Peptidyl-prolyl cis-trans isomerase H OS=Cryptococ... [more]
CYPH_ENCCU1.876e-4254.65Peptidyl-prolyl cis-trans isomerase OS=Encephalito... [more]
PPIH_HUMAN2.449e-4251.15Peptidyl-prolyl cis-trans isomerase H OS=Homo sapi... [more]
PPIH_BOVIN2.449e-4251.15Peptidyl-prolyl cis-trans isomerase H OS=Bos tauru... [more]
PPIA_PARPR3.199e-4253.66Peptidyl-prolyl cis-trans isomerase OS=Paramecium ... [more]
RBP2_BOVIN5.457e-4252.05E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos ta... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884526 ID=CV884526; Name=CV884526; organism=Citrus sinensis; type=EST; length=825bp
TTTTTTTTTTTTTTTTTGATATGGATTCCCGCATTCGCGTACTTATTTCG
GGTGCTTCCATAAGCCTTCTTCTACACAAGTTAGAAAAGAAACACTAAAT
GTGATGAGATAGCTATCAGAGAAAAGGATCCCCTTAAAATGAAGCACCAG
CTTGGCAAACAACCTAGGACATTTTAAAATGTCTATTACATGATAAATAG
GCAAATTATGAGTATCTTCATGAAGGTTGAAAAGACGAGAGGACTAAAAA
GGGGTATAGCGTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCA
CCGCTGTCTGCAACGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCC
TTCAGCTTCAACCTTGTAAACTACATCCATCCCCGATAGCACCTTTCCAA
ATACAACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAG
AATTGTGAACCATTGGTGTCTGGACCAGCATTTGCCATTGACAAAAGCCC
TGGGCCAGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCAT
AAATTGACTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGA
AGCATAAAGCTGGGAATAATCCTATGGAACGTACTTCCCTTGTAGTGGAG
TGGCTTCCCGCTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGA
AATTTTCTGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATA
CGTCCGGCAGGTTTTCCAGCAATCTCAACGTCAAAGTAAACTTTGTTTGT
GATTTCTTTCAAATTCTGATCCGAT
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