CV884526

Overview
NameCV884526
Unique NameCV884526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIH_MOUSE (Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus GN=Ppih PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.994e-40
Identity = 82/153 (53.59%), Postives = 99/153 (64.71%), Query Frame = -2
Query:  357 NLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 815
            N   +   V+FDV I G+  GR+ + LF   VPKTAENFR  CTGE    K G P+ YKGSTFHR+I  FM+Q             SIY   F DENFKL+H+ PGLLSMAN+GP TNG QFFIT     WLDG+HVVFGK++ G+ V+ K+E
Sbjct:    5 NSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIE 155          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIG_RAT (Peptidyl-prolyl cis-trans isomerase G OS=Rattus norvegicus GN=Ppig PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.994e-40
Identity = 88/168 (52.38%), Postives = 108/168 (64.29%), Query Frame = -2
Query:  297 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSG-KPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGT-PKSKVVVADSGE 794
            + +FD+ I  +PAGR+V  LF    PKT ENFR LCTGEKG GKS  KPLHYK   FHR++  FM+Q           GESIYG  F DE+F +KH    LLSMAN G DTNGSQFFITT  T  LDG HVVFG+V+SG +VV ++E +     + P ++V +   GE
Sbjct:    9 RCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGE 176          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIG_MOUSE (Peptidyl-prolyl cis-trans isomerase G OS=Mus musculus GN=Ppig PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.994e-40
Identity = 88/168 (52.38%), Postives = 108/168 (64.29%), Query Frame = -2
Query:  297 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSG-KPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGT-PKSKVVVADSGE 794
            + +FD+ I  +PAGR+V  LF    PKT ENFR LCTGEKG GKS  KPLHYK   FHR++  FM+Q           GESIYG  F DE+F +KH    LLSMAN G DTNGSQFFITT  T  LDG HVVFG+V+SG +VV ++E +     + P ++V +   GE
Sbjct:    9 RCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGE 176          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIG_HUMAN (Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.994e-40
Identity = 88/168 (52.38%), Postives = 108/168 (64.29%), Query Frame = -2
Query:  297 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSG-KPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGT-PKSKVVVADSGE 794
            + +FD+ I  +PAGR+V  LF    PKT ENFR LCTGEKG GKS  KPLHYK   FHR++  FM+Q           GESIYG  F DE+F +KH    LLSMAN G DTNGSQFFITT  T  LDG HVVFG+V+SG +VV ++E +     + P ++V +   GE
Sbjct:    9 RCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGE 176          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIH_EMENI (Peptidyl-prolyl cis-trans isomerase H OS=Emericella nidulans GN=cyp3 PE=3 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 5.108e-40
Identity = 83/166 (50.00%), Postives = 105/166 (63.25%), Query Frame = -2
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGE-KFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 791
            V+FDV + G+P GR+ + LF    P+TAENFR  CTGE    + G+P  YKGS FHR+I  FM+Q             +IYG  KF DENF L+H  PGLLSMAN+GP+TNG QFFITT  T +L+G+HVVFG+V+ GMD+V  +E        P   VV+   GE
Sbjct:   18 VFFDVALGGEPLGRLKLELFADVTPRTAENFRQFCTGESK-NQQGRPQGYKGSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFSDENFTLRHDRPGLLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVIDGMDIVRMIENTRTTRDKPNQDVVIIQCGE 182          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.671e-40
Identity = 89/169 (52.66%), Postives = 106/169 (62.72%), Query Frame = -2
Query:  300 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGK--PLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAE--GRQNGTPKSKVVVADSG 794
            K +FD+ I GKP GRIV  L+   VPKTAENF  LC G  G+ K+    PL YKGS FHR+I  FM Q           GESIY EKF DENF +KH  P LLSMANAGP+TNGSQ FIT V T  LDG+HVVFG+V+ G  +V  +E +   ++N  P   V + D G
Sbjct:    5 KTFFDISIGGKPQGRIVFELYNDIVPKTAENFLKLCEGNAGMAKTKPDVPLSYKGSIFHRVIKDFMCQFGDFTNFNGTGGESIYDEKFEDENFTVKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIQGKRIVRLIENQQCDQENNKPLRDVKIDDCG 173          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: CYPH_UROFA (Peptidyl-prolyl cis-trans isomerase OS=Uromyces fabae GN=PIG28 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.712e-40
Identity = 87/164 (53.05%), Postives = 102/164 (62.20%), Query Frame = -2
Query:  300 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYK-VEAEGRQNGTPKSKVVVADSG 788
            YFDV   GKP GRIV  L+   VP+T  NFR LC    G G       +K S FHR+IP FM+Q           GESIYG+KF DENF+ KH   G+LSMANAGP+TNGSQFFIT   T WLDG+HVVFGKV+ G D V K +E  G Q+G   S + + D G
Sbjct:    5 YFDVSSNGKPLGRIVFELYDDVVPRTTNNFRQLCLNPPGKG-------FKHSIFHRVIPDFMIQGGDFTNGNGTGGESIYGKKFEDENFQKKHVERGMLSMANAGPNTNGSQFFITVTKTPWLDGKHVVFGKVIEGYDQVVKAMEKTGSQSGKTSSVLKIEDCG 161          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: CYPB_YEAST (Peptidyl-prolyl cis-trans isomerase B OS=Saccharomyces cerevisiae GN=CPR2 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.712e-40
Identity = 93/177 (52.54%), Postives = 113/177 (63.84%), Query Frame = -2
Query:  297 DQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTV-TTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQ-NGTPKSKVVVADSGE 821
            DQ+ + IT KV+FD+E   +  GRIV+GL+GK  PKTA+NF  L T      K G    + GSTFHR+IP+FM+Q           G+SIYG+ FPDENF LKH   G LSMAN G DTNGSQFFITT    SWLDG+HVVFG+V+ GMDVV  ++   R  N  P   V +A  GE
Sbjct:   28 DQDDEVITQKVFFDIEHGEEKVGRIVIGLYGKVCPKTAKNFYKLSTTTNS--KKG----FIGSTFHRVIPNFMVQGGDFTDGTGVGGKSIYGDTFPDENFTLKHDRKGRLSMANRGKDTNGSQFFITTTEEASWLDGKHVVFGQVVDGMDVVNYIQHVSRDANDKPLEAVKIAKCGE 198          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: CYPD_YEAST (Peptidyl-prolyl cis-trans isomerase D OS=Saccharomyces cerevisiae GN=CPR5 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.324e-39
Identity = 87/171 (50.88%), Postives = 109/171 (63.74%), Query Frame = -2
Query:  297 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 806
            EIT+KVYFD+    K  GRIVMGL+G   P+T ENF  L      I +  K + Y  S FHR+IP+FM+Q           G+SI+G  F DENF +KH  PG LSMAN G +TNGSQFFITTV   WLDG+HVVFG+VL GMDVV+ +E  +      P  +V++ +SGE
Sbjct:   31 EITHKVYFDINHGDKQIGRIVMGLYGLTTPQTVENFYQLT-----ISRDPK-MGYLNSIFHRVIPNFMIQGGDFTHRSGIGGKSIFGNTFKDENFDVKHDKPGRLSMANRGKNTNGSQFFITTVPCPWLDGKHVVFGEVLDGMDVVHYIENVKTDSRNMPVKEVIIVESGE 195          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: CYP11_CAEEL (Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorhabditis elegans GN=cyn-11 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.324e-39
Identity = 86/166 (51.81%), Postives = 100/166 (60.24%), Query Frame = -2
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 791
            V+ +V   G P G IV+ LF    P+TAENFR  CTGE    K G P  YK  TFHR+I  FM+Q             SIYG KF DENF+LKH GPG+LSMANAG DTNG QFFIT   T +LD +HVVFG+VL GM  V K+E      N  PK  +VV   G+
Sbjct:   19 VFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGE--YKKDGVPNGYKNCTFHRVIKDFMIQGGDFCNGDGTGLMSIYGSKFRDENFELKHIGPGMLSMANAGSDTNGCQFFITCAKTDFLDNKHVVFGRVLDGMLTVRKIENVPTGANNKPKLPIVVVQCGQ 182          
The following BLAST results are available for this feature:
BLAST of CV884526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
PPIH_MOUSE2.994e-4053.59Peptidyl-prolyl cis-trans isomerase H OS=Mus muscu... [more]
PPIG_RAT2.994e-4052.38Peptidyl-prolyl cis-trans isomerase G OS=Rattus no... [more]
PPIG_MOUSE2.994e-4052.38Peptidyl-prolyl cis-trans isomerase G OS=Mus muscu... [more]
PPIG_HUMAN2.994e-4052.38Peptidyl-prolyl cis-trans isomerase G OS=Homo sapi... [more]
PPIH_EMENI5.108e-4050.00Peptidyl-prolyl cis-trans isomerase H OS=Emericell... [more]
PPID_YEAST6.671e-4052.66Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]
CYPH_UROFA8.712e-4053.05Peptidyl-prolyl cis-trans isomerase OS=Uromyces fa... [more]
CYPB_YEAST8.712e-4052.54Peptidyl-prolyl cis-trans isomerase B OS=Saccharom... [more]
CYPD_YEAST4.324e-3950.88Peptidyl-prolyl cis-trans isomerase D OS=Saccharom... [more]
CYP11_CAEEL4.324e-3951.81Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884526 ID=CV884526; Name=CV884526; organism=Citrus sinensis; type=EST; length=825bp
TTTTTTTTTTTTTTTTTGATATGGATTCCCGCATTCGCGTACTTATTTCG
GGTGCTTCCATAAGCCTTCTTCTACACAAGTTAGAAAAGAAACACTAAAT
GTGATGAGATAGCTATCAGAGAAAAGGATCCCCTTAAAATGAAGCACCAG
CTTGGCAAACAACCTAGGACATTTTAAAATGTCTATTACATGATAAATAG
GCAAATTATGAGTATCTTCATGAAGGTTGAAAAGACGAGAGGACTAAAAA
GGGGTATAGCGTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCA
CCGCTGTCTGCAACGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCC
TTCAGCTTCAACCTTGTAAACTACATCCATCCCCGATAGCACCTTTCCAA
ATACAACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAG
AATTGTGAACCATTGGTGTCTGGACCAGCATTTGCCATTGACAAAAGCCC
TGGGCCAGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCAT
AAATTGACTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGA
AGCATAAAGCTGGGAATAATCCTATGGAACGTACTTCCCTTGTAGTGGAG
TGGCTTCCCGCTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGA
AATTTTCTGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATA
CGTCCGGCAGGTTTTCCAGCAATCTCAACGTCAAAGTAAACTTTGTTTGT
GATTTCTTTCAAATTCTGATCCGAT
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