CV884526

Overview
NameCV884526
Unique NameCV884526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: CYP9_CAEBR (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis briggsae GN=cyn-9 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.302e-35
Identity = 81/176 (46.02%), Postives = 109/176 (61.93%), Query Frame = -2
Query:  297 LKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKP-LHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG---MDVVYKVEAEGRQNGTPKSKVVVADSGE 812
            +  +  +V+ D+ +  KP GRI + LF    PKT ENFRALCTGE G+  + K  LHYKG+  HR++  FM+Q           G SIYG  F DE F LKH+ P LLSMAN GP++N SQFFITT      +G+HVVFG+V+ G   +DV+  +E +G+    P +KV + +SGE
Sbjct:    1 MSSLEKRVFLDMALDEKPIGRIEIKLFTSEAPKTCENFRALCTGEVGMAPNNKARLHYKGNEIHRVVKKFMIQGGDITDGDGRGGFSIYGRYFDDEKFVLKHSKPYLLSMANKGPNSNSSQFFITTAPAPHCNGKHVVFGEVIKGREVVDVLDNLEVDGKSK--PIAKVRIFNSGE 174          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIA_NEOCA (Peptidyl-prolyl cis-trans isomerase OS=Neospora caninum PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.788e-35
Identity = 85/166 (51.20%), Postives = 100/166 (60.24%), Query Frame = -2
Query:  300 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLS-GMDVVYKVEAEGRQNGTPKSKVVVADSG 794
            K + D+EI G+ AGRIV+ L G  VPKT +NF         IG   K   YKGSTFHR+I  FM+Q           G SIYG +F DENF LKH   G++SMANAGP+TNGSQFFITTV T WLDGRHVVFGK+ +     V  +EA G   G P     + D G
Sbjct:   24 KAFMDIEIDGESAGRIVLELRGDVVPKTVKNF---------IGLFDK---YKGSTFHRVIADFMIQGGDFENHNGTGGHSIYGPRFEDENFTLKHDR-GVISMANAGPNTNGSQFFITTVKTEWLDGRHVVFGKITNDSWPTVQAIEALGSSGGRPSKIAKITDIG 176          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.455e-34
Identity = 80/168 (47.62%), Postives = 104/168 (61.90%), Query Frame = -2
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYG-EKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE--AEGRQNGTPKSKVVVADSGE 791
            V+FD+ I   P GR+ M LF   VP+TAENFR LCTGE    ++G P  YK   FHR+I  FM+Q              IYG ++F DENF  KHTG GLLSMAN+GP++NG QFFIT     +LDG+HVVFG+++ G+  + K+E  A G  N  PK  V + + G+
Sbjct:   13 VFFDISIGDVPVGRMKMELFSDIVPRTAENFRQLCTGE--YKRNGVPQGYKNCLFHRVIKDFMVQGGDFIKGDGTGAMCIYGGDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLVDGLLTLRKIENVATG-PNNRPKLPVKITECGQ 177          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: CYP9_CAEEL (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis elegans GN=cyn-9 PE=2 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 9.330e-34
Identity = 79/168 (47.02%), Postives = 103/168 (61.31%), Query Frame = -2
Query:  297 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKP-LHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVV-YKVEAEGRQNGTPKSKVVVADSGE 794
            +V+ D+ +     GRI + LF +  PKT ENFRALCTGE G+  + K  LHYK + FHRI+  FM+Q           G SIYG  F DE FKLKH+ P LLSMAN GP++N SQFFITT      +G+HVVFG+V+ G +VV Y           P +KV++++ GE
Sbjct:    6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRIVKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNLAVDDKSKPLAKVLISNCGE 173          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 4.630e-33
Identity = 79/156 (50.64%), Postives = 92/156 (58.97%), Query Frame = -2
Query:  297 PAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 761
            PAGR+   LF   VP+T+ENFR LCTGE     +  P  YK S FHRII  FM Q             SIYG+KF DENF LKH   GLLSMAN+GP TNG QFFIT     +LDG+HVVFGKV+ G+  + K+E      N  PK  V +   GE
Sbjct:    2 PAGRLKCELFSDIVPRTSENFRQLCTGE--FRPNHVPEGYKNSIFHRIIKDFMCQGGDFINADGTGSRSIYGDKFDDENFTLKHDKAGLLSMANSGPGTNGCQFFITAQPCPFLDGKHVVFGKVVDGLLTLRKMENVPTGANNRPKMAVRITQCGE 155          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIL6_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos taurus GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.945e-31
Identity = 67/167 (40.12%), Postives = 97/167 (58.08%), Query Frame = -2
Query:  297 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 797
            N V+ D+ I   P GR++  L+    PKT +NF+ LCTG+ G  +SG  LHY GS FHR++ +  +Q           GESIYG  F DENF + H   G+L M N G  +NGSQF+IT     +LD ++V FG+++ G DV++ +E+   +N  P    V+  SG+
Sbjct:  138 NFVFLDISIDLYPIGRLIFELYSDTCPKTCKNFQILCTGKAGFSQSGIKLHYTGSIFHRVVRNGWVQGGDIVAGKGDNGESIYGPTFEDENFSVPHNKRGVLGMVNKGRHSNGSQFYITLQAAPYLDKKYVAFGQLIEGTDVLHHLESVPTENERPIQNCVITASGQ 304          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIL6_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo sapiens GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.655e-31
Identity = 68/165 (41.21%), Postives = 95/165 (57.58%), Query Frame = -2
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 791
            V+ D+ I   P GR++  L+    PKT +NF+ LCTG+ G  + G  LHYK S FHRI+ +  +Q           GESIYG  F DENF + H   G+L MAN G  +NGSQF+IT   T +LD + V FG+++ G +V+ ++E    QN  P     + DSG+
Sbjct:  144 VFLDICIDSSPIGRLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYGKGDNGESIYGPTFEDENFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAFGQLIEGTEVLKQLELVPTQNERPIHMCRITDSGD 308          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIB_TREPA (Probable peptidyl-prolyl cis-trans isomerase OS=Treponema pallidum GN=ppiB PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.351e-26
Identity = 67/135 (49.63%), Postives = 83/135 (61.48%), Query Frame = -2
Query:  354 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA 755
            G IV+ LF +  P T  NF  L  G   + K G+P  Y+G TFHR+I  FM+Q                G +FPDE +  L+H  PG+LSMANAGP TNGSQFFIT V T WLDG+H VFGKV+ GM+VV+ + A
Sbjct:   49 GTIVLSLFFEKAPLTVCNFVGLAEGTLAVCK-GRPF-YQGLTFHRVIKDFMIQGGDPQGNGTGGP----GYQFPDECDPALRHDSPGVLSMANAGPGTNGSQFFITHVATPWLDGKHTVFGKVVEGMEVVHAIIA 177          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.221e-25
Identity = 68/160 (42.50%), Postives = 90/160 (56.25%), Query Frame = -2
Query:  297 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYK---VEAEGRQNGTPKSKVV---VADSGE 755
            G   + L+    PKT +NF  L   ++G        +Y    FHRIIP+FM+Q             SIYGEKF DE    LKHTG G+LSMAN+GP+TNGSQFF+T   T WLDG+H +FG+V SGM V+ +   V+  G      + K++   V + GE
Sbjct:   12 GSFTVELYNSHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIRADLKHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMRVIQRMGLVKTNGEDRPVDEVKIIRARVVEEGE 160          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIL1_EMENI (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emericella nidulans GN=cyp1 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.061e-25
Identity = 62/133 (46.62%), Postives = 80/133 (60.15%), Query Frame = -2
Query:  360 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKV 755
            G   + L+    PKT +NF  L   ++G        +Y    FHRIIP+FM+Q             SIYGEKF DE    LKHTG G+LSMAN+GP+TNGSQFFIT   T WLDG+H +FG+V SGM ++ ++
Sbjct:   12 GSFTVELYNSHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIRSDLKHTGAGILSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRIIQRM 133          
The following BLAST results are available for this feature:
BLAST of CV884526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
CYP9_CAEBR1.302e-3546.02Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIA_NEOCA3.788e-3551.20Peptidyl-prolyl cis-trans isomerase OS=Neospora ca... [more]
PPIH_RHIOR2.455e-3447.62Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
CYP9_CAEEL9.330e-3447.02Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIH_USTMA4.630e-3350.64Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]
PPIL6_BOVIN1.945e-3140.12Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos ... [more]
PPIL6_HUMAN9.655e-3141.21Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo... [more]
PPIB_TREPA9.351e-2649.63Probable peptidyl-prolyl cis-trans isomerase OS=Tr... [more]
PPIL1_ASPOR1.221e-2542.50Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_EMENI6.061e-2546.62Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emer... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884526 ID=CV884526; Name=CV884526; organism=Citrus sinensis; type=EST; length=825bp
TTTTTTTTTTTTTTTTTGATATGGATTCCCGCATTCGCGTACTTATTTCG
GGTGCTTCCATAAGCCTTCTTCTACACAAGTTAGAAAAGAAACACTAAAT
GTGATGAGATAGCTATCAGAGAAAAGGATCCCCTTAAAATGAAGCACCAG
CTTGGCAAACAACCTAGGACATTTTAAAATGTCTATTACATGATAAATAG
GCAAATTATGAGTATCTTCATGAAGGTTGAAAAGACGAGAGGACTAAAAA
GGGGTATAGCGTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCA
CCGCTGTCTGCAACGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCC
TTCAGCTTCAACCTTGTAAACTACATCCATCCCCGATAGCACCTTTCCAA
ATACAACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAG
AATTGTGAACCATTGGTGTCTGGACCAGCATTTGCCATTGACAAAAGCCC
TGGGCCAGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCAT
AAATTGACTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGA
AGCATAAAGCTGGGAATAATCCTATGGAACGTACTTCCCTTGTAGTGGAG
TGGCTTCCCGCTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGA
AATTTTCTGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATA
CGTCCGGCAGGTTTTCCAGCAATCTCAACGTCAAAGTAAACTTTGTTTGT
GATTTCTTTCAAATTCTGATCCGAT
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