CV884526

Overview
NameCV884526
Unique NameCV884526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIL3_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus musculus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.599e-17
Identity = 55/134 (41.04%), Postives = 74/134 (55.22%), Query Frame = -2
Query:  357 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 755
            G I + +F +  PKT ENF ALC             +Y G  FHR I  FM+Q             SI+ +KF DE  + LKH   G++SMAN GP+TNGSQFFIT      LD ++ VFGKV+ G++ + ++E
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPTGTGRGG-SSIWAKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELE 132          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: CYPR_YEAST (Peptidyl-prolyl cis-trans isomerase CPR4 OS=Saccharomyces cerevisiae GN=CPR4 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.652e-17
Identity = 54/145 (37.24%), Postives = 74/145 (51.03%), Query Frame = -2
Query:  375 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGI--GKSGKPLH---YKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT--TSWLDGRHVVFGKVLSGMD 788
            YFD          +   L+G  VPKT  NF  L  G K +  GK    +H   Y+ +  +++ P+  +Q             ++YG KF DENF LKH  P  L+MA  GPD+N S+F ITT       LDG+ VVFG++ SG+D
Sbjct:   55 YFDPVSKSMKEADLTFELYGTVVPKTVNNFAMLAHGVKAVIEGKDPNDIHTYSYRKTKINKVYPNKYIQGGVVAPDVGPF--TVYGPKFDDENFYLKHDRPERLAMAYFGPDSNTSEFIITTKADGNEELDGKSVVFGQITSGLD 197          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: CYP10_CAEEL (Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorhabditis elegans GN=cyn-10 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.075e-17
Identity = 54/135 (40.00%), Postives = 71/135 (52.59%), Query Frame = -2
Query:  357 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 758
            +G I + L+    PK  ENF ALC  +          +Y G  FHR I  FM+Q            ESI+G  F DE    LKH   G +SMAN GPD+N SQFFIT    + LD ++ +FGKV+ G D + ++E
Sbjct:    9 SGDIKIELYVDDAPKACENFLALCASD----------YYNGCIFHRNIKDFMVQTGDPTHSGKGG-ESIWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGKVIDGFDTLEEIE 132          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIB_STRCH (Peptidyl-prolyl cis-trans isomerase B OS=Streptomyces chrysomallus GN=cypB PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.935e-17
Identity = 53/128 (41.41%), Postives = 68/128 (53.12%), Query Frame = -2
Query:  390 GRIVMGLFGKAVPKTAENFRALCTGEKG-----IGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKV 755
            G I + L     PKT  NF  L TG++       G+      Y G+ FHR+I  FM+Q                G KF DE + +L  T P LL+MANAGP TNGSQFF+T   T+WL G+H +FG+V
Sbjct:   14 GDIEIRLLPNHAPKTVRNFVELATGQREWVNPETGEKSTDRLYDGTVFHRVISGFMIQGGDPLGNGTGGP----GYKFADEFHPELGFTQPYLLAMANAGPGTNGSQFFLTVSPTAWLTGKHTIFGEV 137          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIA_MYCTU (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium tuberculosis GN=ppiA PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.935e-17
Identity = 62/159 (38.99%), Postives = 79/159 (49.69%), Query Frame = -2
Query:  312 GRIVMGLFGKAVPKTAENFRALCTGEKGIGK---SGKPL--HYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG-----MDVVYKVEAEGRQNGTPKSKVVV 755
            G I + LFG   PKT  NF  L  G K       SG P    Y G+ FHR+I  FM+Q                G KF DE + +L+   P LL+MANAGP TNGSQFFIT   T  L+ RH +FG+V+       ++ + K   +G  N  P   VV+
Sbjct:   24 GDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP----GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDG--NDRPTDPVVI 176          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIA_MYCBO (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium bovis GN=ppiA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.935e-17
Identity = 62/159 (38.99%), Postives = 79/159 (49.69%), Query Frame = -2
Query:  312 GRIVMGLFGKAVPKTAENFRALCTGEKGIGK---SGKPL--HYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG-----MDVVYKVEAEGRQNGTPKSKVVV 755
            G I + LFG   PKT  NF  L  G K       SG P    Y G+ FHR+I  FM+Q                G KF DE + +L+   P LL+MANAGP TNGSQFFIT   T  L+ RH +FG+V+       ++ + K   +G  N  P   VV+
Sbjct:   24 GDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP----GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDG--NDRPTDPVVI 176          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: CYP4_CAEEL (Peptidyl-prolyl cis-trans isomerase 4 OS=Caenorhabditis elegans GN=cyn-4 PE=2 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 7.935e-17
Identity = 55/151 (36.42%), Postives = 76/151 (50.33%), Query Frame = -2
Query:  312 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGT--PKSKVVV 755
            G + + LF   VPK  ENF   C+            +Y  + FHR+I +FMLQ            ESI+ + F DE      H   G+LSMAN G +TNGSQFFIT     +LD +H +FG+++ G D +  +E    + GT  P   VV+
Sbjct:  289 GPLNLELFAPKVPKACENFITHCSNG----------YYNNTKFHRLIKNFMLQGGDPTGTGHGG-ESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRLVGGQDTLTTIEKLETEEGTDVPMVSVVI 428          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIA_MYCLE (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium leprae GN=ppiA PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.768e-16
Identity = 63/159 (39.62%), Postives = 77/159 (48.43%), Query Frame = -2
Query:  303 GRIVMGLFGKAVPKTAENFRALCTGEKGIGK---SGKPL--HYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL--SGMDVVYKVEAEGRQNGTPKSKVVVADS 755
            G I + LFG  VPKT  NF  L  G K       SG P    Y G+ FHR+I  FM+Q                G KF DE + +L+   P LL+MANAGP TNGSQFFIT   T  L+ RH +FG+V       VV  +           ++ VV DS
Sbjct:   24 GDIKVALFGNHVPKTVANFVGLAQGTKEYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP----GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGETPHLNRRHTIFGEVTDPDSQKVVDAISTTATDGNDRPTEPVVIDS 178          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIL3_DICDI (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dictyostelium discoideum GN=ppil3 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.015e-16
Identity = 54/134 (40.30%), Postives = 75/134 (55.97%), Query Frame = -2
Query:  357 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 755
            G I + +F  +VP  +ENF ALC             +Y  + FHR I  FM+Q            ESI+ ++F DE    LKH   G+LSMAN+GPDTNGSQFFIT      L+  + VFGK+++G++V+  +E
Sbjct:   10 GDIKVEIFCDSVPLASENFLALCASN----------YYNNTIFHRNIKGFMIQGGDPTNTGRGG-ESIWKKQFKDEFPSHLKHNTRGILSMANSGPDTNGSQFFITYGKHRSLNKVYTVFGKIIAGIEVLDLME 132          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIL2_ARATH (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.015e-16
Identity = 51/122 (41.80%), Postives = 71/122 (58.20%), Query Frame = -2
Query:  357 PKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 719
            P+  ENF  LC  E+G        +Y G  FHR I +FM+Q            ESI+G+ F DE N KL H+G G++SMAN+GP TNGSQFF+   + + L+ +H VFG V+ G+  +  +E
Sbjct:  365 PRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQGGDPTGTGKGG-ESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAME 475          
The following BLAST results are available for this feature:
BLAST of CV884526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
PPIL3_MOUSE1.599e-1741.04Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus ... [more]
CYPR_YEAST4.652e-1737.24Peptidyl-prolyl cis-trans isomerase CPR4 OS=Saccha... [more]
CYP10_CAEEL6.075e-1740.00Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorha... [more]
PPIB_STRCH7.935e-1741.41Peptidyl-prolyl cis-trans isomerase B OS=Streptomy... [more]
PPIA_MYCTU7.935e-1738.99Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
PPIA_MYCBO7.935e-1738.99Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
CYP4_CAEEL7.935e-1736.42Peptidyl-prolyl cis-trans isomerase 4 OS=Caenorhab... [more]
PPIA_MYCLE1.768e-1639.62Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
PPIL3_DICDI3.015e-1640.30Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dict... [more]
PPIL2_ARATH3.015e-1641.80Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arab... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884526 ID=CV884526; Name=CV884526; organism=Citrus sinensis; type=EST; length=825bp
TTTTTTTTTTTTTTTTTGATATGGATTCCCGCATTCGCGTACTTATTTCG
GGTGCTTCCATAAGCCTTCTTCTACACAAGTTAGAAAAGAAACACTAAAT
GTGATGAGATAGCTATCAGAGAAAAGGATCCCCTTAAAATGAAGCACCAG
CTTGGCAAACAACCTAGGACATTTTAAAATGTCTATTACATGATAAATAG
GCAAATTATGAGTATCTTCATGAAGGTTGAAAAGACGAGAGGACTAAAAA
GGGGTATAGCGTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCA
CCGCTGTCTGCAACGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCC
TTCAGCTTCAACCTTGTAAACTACATCCATCCCCGATAGCACCTTTCCAA
ATACAACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAG
AATTGTGAACCATTGGTGTCTGGACCAGCATTTGCCATTGACAAAAGCCC
TGGGCCAGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCAT
AAATTGACTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGA
AGCATAAAGCTGGGAATAATCCTATGGAACGTACTTCCCTTGTAGTGGAG
TGGCTTCCCGCTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGA
AATTTTCTGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATA
CGTCCGGCAGGTTTTCCAGCAATCTCAACGTCAAAGTAAACTTTGTTTGT
GATTTCTTTCAAATTCTGATCCGAT
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