CV884526

Overview
NameCV884526
Unique NameCV884526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2181 contig Csv1_Contig2181:156..978. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.084e-53
Identity = 109/170 (64.12%), Postives = 123/170 (72.35%), Query Frame = -2
Query:  297 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVVADSGE 803
            ITNKVYFD+E  GKP GRIVMGL+GK VPKTAENFRAL TG+   G+      Y+GS+FHRII +FM+Q           G+SIYG KFPDENFKLKHTGPG+LSMANAG DTNGSQFFI TV T+WLD RHVVFG VL GMDVVY +E      G  P   + +A SGE
Sbjct:   43 ITNKVYFDIEHGGKPLGRIVMGLYGKTVPKTAENFRALATGKNSDGED-LGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVLEGMDVVYAMENVKTSRGDKPVEPITIAASGE 211          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.028e-53
Identity = 106/171 (61.99%), Postives = 124/171 (72.51%), Query Frame = -2
Query:  297 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVVADSGE 806
            ++TNKVYFD++   K  GRIV+GL+G+ VPKT ENFRAL TGEKG G       YK S FHR+I  FM+Q           G+SIYGE+F DENFKL+HTGPG+LSMANAG DTNGSQFFITTVTTSWLDGRHVVFGKV+ GMDVV  +E      G  P + V++AD GE
Sbjct:   27 KVTNKVYFDIKQGDKDLGRIVLGLYGEVVPKTVENFRALATGEKGYG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFFITTVTTSWLDGRHVVFGKVIEGMDVVTAIETTKTLPGDRPATPVIIADCGE 190          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIB_NEUCR (Peptidyl-prolyl cis-trans isomerase B OS=Neurospora crassa GN=cpr-2 PE=3 SV=3)

HSP 1 Score: 208.379 bits (529), Expect = 4.028e-53
Identity = 108/171 (63.16%), Postives = 124/171 (72.51%), Query Frame = -2
Query:  297 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 806
            +IT+KVYFD+E   KP GRIVMGL+GK VPKTAENFRAL TGEKG G       Y+GSTFHR+I  FM+Q           G+SIYG+KFPDENFKLKH+  GLLSMANAG DTNGSQFFITTV TSWLDG+HVVFG+VL G DVV K+E  +      P   + +A SGE
Sbjct:   32 KITHKVYFDIEQGDKPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKQFMIQGGDFTKGDGTGGKSIYGDKFPDENFKLKHSKKGLLSMANAGKDTNGSQFFITTVITSWLDGKHVVFGEVLEGYDVVEKIENTKTGPRDAPAEPIKIAKSGE 195          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.531e-52
Identity = 99/166 (59.64%), Postives = 118/166 (71.08%), Query Frame = -2
Query:  297 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 794
            +V+FD+ ++G P GRI M LF    P TAENFRALCTGEKG+GK GKPLH+KGS FHR+IP FM Q           GESIYG KF DENF  KHTG G+LSMAN+GP+TNGSQFFI T  TSWLDG+HVVFG+V+ G+DVV  +E  G  +G     V + D G+
Sbjct:    5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQ 170          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.999e-52
Identity = 102/166 (61.45%), Postives = 120/166 (72.29%), Query Frame = -2
Query:  297 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 794
            KV+FDV    KP GRIVM L    VP+TAENFRALCTGEKG G       YKG +FHR+IP FMLQ           G+SIYG KF DENF LKHTGPG LSMANAGP+TNGSQFFITT+  SWLDG+HVVFG+V  GMDVV  +E+ G  NGTP++K+++ + G+
Sbjct:    5 KVFFDVSANSKPLGRIVMELRADVVPQTAENFRALCTGEKGFG-------YKGCSFHRVIPEFMLQGGDFTNHNGTGGKSIYGNKFRDENFTLKHTGPGDLSMANAGPNTNGSQFFITTIKCSWLDGKHVVFGRVTEGMDVVQNIESLGSPNGTPRAKIIIDNCGQ 163          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIF_HUMAN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Homo sapiens GN=PPIF PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.611e-52
Identity = 101/165 (61.21%), Postives = 118/165 (71.52%), Query Frame = -2
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 791
            VY DV+  GKP GR+V+ L    VPKTAENFRALCTGEKG G       YKGSTFHR+IPSFM Q           G+SIYG +FPDENF LKH GPG+LSMANAGP+TNGSQFFI T+ T WLDG+HVVFG V  GMDVV K+E+ G ++G    K+V+ D G+
Sbjct:   48 VYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQ 205          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.611e-52
Identity = 105/164 (64.02%), Postives = 119/164 (72.56%), Query Frame = -2
Query:  300 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSG 791
            VYFD+ I GKPAGRI   LF   VPKTA+NFRALCTGE+G G       YKGS FHR+IP FMLQ           G+SIYGEKF DENFKLKH+ PGLLSMANAGP+TNGSQFFITTV  SWLDG HVVFGKV   M++V K+E+ G  +G  K+KVV+ D G
Sbjct:    3 VYFDISIDGKPAGRIEFQLFEDVVPKTAKNFRALCTGEQGFG-------YKGSKFHRVIPQFMLQGGDFTRGDGTGGKSIYGEKFADENFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHVVFGKVTKNMELVSKIESLGSASGAVKAKVVIEDCG 159          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPID_EMENI (Peptidyl-prolyl cis-trans isomerase D OS=Emericella nidulans GN=cpr6 PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.454e-52
Identity = 101/166 (60.84%), Postives = 120/166 (72.29%), Query Frame = -2
Query:  297 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 794
            +V+FD++I  +  GRI   LF   VPKTAENFRALCTGEKG+GK GKPLH+KGS FHR+I  FM+Q           GESIYGEKFPDENF+LKH  P LLSMAN+GP TNGSQFFITTV T  LDG+HVVFG+V++G  VV K+E    Q   P + V +A+ GE
Sbjct:    8 RVFFDIQIGQQQTGRIAFELFNDVVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKIENMPTQADKPTTDVTIAECGE 173          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: CYPX_USEUD (Peptidyl-prolyl cis-trans isomerase OS=Unspecified eudicot DB-1992 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 7.597e-52
Identity = 108/165 (65.45%), Postives = 121/165 (73.33%), Query Frame = -2
Query:  297 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVVADSGE 788
            +FD+ I G+PAGRI+M LF   VPKTAENFRALCTGEKGIG SGK + Y+GS FHR+IP FMLQ           GESIYG KF DENF  KHT PGLLSMANAGP TNGSQFFITTV T  LDG+HVVFGKV+ GMDVV K+EA     G  P S+V +A  G+
Sbjct:    5 FFDMTIGGQPAGRIIMELFPD-VPKTAENFRALCTGEKGIGPSGKKMTYEGSVFHRVIPKFMLQGGDFTLGNGRGGESIYGAKFADENFIHKHTTPGLLSMANAGPGTNGSQFFITTVATPHLDGKHVVFGKVVEGMDVVRKIEATQTDRGDKPLSEVKIAKCGQ 168          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 203.756 bits (517), Expect = 9.922e-52
Identity = 103/167 (61.68%), Postives = 120/167 (71.86%), Query Frame = -2
Query:  297 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 797
            ++VYFDVE  G+P GR+V  L+   VPKTAENFRALCTGEKG G       Y GS FHR+IP FMLQ           G+SIYG KFPDENFK  H  PGLLSMANAGP+TNGSQFFITTV   WLDG+HVVFG+V+ G D+V KVE+ G  +G  K+++VVA SGE
Sbjct:    2 SQVYFDVEADGQPIGRVVFKLYNDIVPKTAENFRALCTGEKGFG-------YAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGYDIVKKVESLGSPSGATKARIVVAKSGE 161          
The following BLAST results are available for this feature:
BLAST of CV884526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
PPIB_CRYNE3.084e-5364.12Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
PPIB_ORPSP4.028e-5361.99Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyc... [more]
PPIB_NEUCR4.028e-5363.16Peptidyl-prolyl cis-trans isomerase B OS=Neurospor... [more]
CP18D_ARATH1.531e-5259.64Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
PPIA1_RHIOR1.999e-5261.45Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus... [more]
PPIF_HUMAN2.611e-5261.21Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIA2_RHIOR2.611e-5264.02Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]
PPID_EMENI4.454e-5260.84Peptidyl-prolyl cis-trans isomerase D OS=Emericell... [more]
CYPX_USEUD7.597e-5265.45Peptidyl-prolyl cis-trans isomerase OS=Unspecified... [more]
CYPH_YEAST9.922e-5261.68Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884526 ID=CV884526; Name=CV884526; organism=Citrus sinensis; type=EST; length=825bp
TTTTTTTTTTTTTTTTTGATATGGATTCCCGCATTCGCGTACTTATTTCG
GGTGCTTCCATAAGCCTTCTTCTACACAAGTTAGAAAAGAAACACTAAAT
GTGATGAGATAGCTATCAGAGAAAAGGATCCCCTTAAAATGAAGCACCAG
CTTGGCAAACAACCTAGGACATTTTAAAATGTCTATTACATGATAAATAG
GCAAATTATGAGTATCTTCATGAAGGTTGAAAAGACGAGAGGACTAAAAA
GGGGTATAGCGTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCA
CCGCTGTCTGCAACGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCC
TTCAGCTTCAACCTTGTAAACTACATCCATCCCCGATAGCACCTTTCCAA
ATACAACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAG
AATTGTGAACCATTGGTGTCTGGACCAGCATTTGCCATTGACAAAAGCCC
TGGGCCAGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCAT
AAATTGACTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGA
AGCATAAAGCTGGGAATAATCCTATGGAACGTACTTCCCTTGTAGTGGAG
TGGCTTCCCGCTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGA
AATTTTCTGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATA
CGTCCGGCAGGTTTTCCAGCAATCTCAACGTCAAAGTAAACTTTGTTTGT
GATTTCTTTCAAATTCTGATCCGAT
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