CV884526

Overview
NameCV884526
Unique NameCV884526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIL2_USTMA (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Ustilago maydis GN=CYP8 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.814e-14
Identity = 60/149 (40.27%), Postives = 74/149 (49.66%), Query Frame = -2
Query:  306 GKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFK---LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMD--VVYKVEAEGRQNGT--PKSKVVVAD 731
            GKA PKT  NF  LC       K GK   Y  + FHR IP FM+Q             SI+   F DE  +    KH   G+LSMAN G DTN SQFFIT      LDG+H VFG+++ G     + K+E    + GT  P  K+ + D
Sbjct:  311 GKA-PKTCFNFLQLC-------KHGK---YDDTLFHRNIPGFMIQGGDPTGTGRGG-SSIWNSNFRDEFNEPGAFKHDTRGVLSMANKGKDTNASQFFITYRGVPHLDGKHTVFGRLVDGDKDATLTKMEQVPSEQGTDRPLKKIQIQD 447          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIL2_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neurospora crassa GN=cyp-8 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.211e-14
Identity = 58/169 (34.32%), Postives = 80/169 (47.34%), Query Frame = -2
Query:  306 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGT--PKSKVVVAD 803
            I NK Y  +E      G + + L  +  PK   NF  L   EKG        +Y+   FHR I +FM+Q             SI+G+ F DE      H+  G++SMAN G +TN SQFFIT    S LD +H +F KV+ G D           +G+  P +K+V+ D
Sbjct:  326 IKNKGYVRMETN---LGPLTLELLPEFAPKAVWNFLRL--SEKG--------YYRDVAFHRSIRNFMIQGGDPSGTGRGG-SSIWGKNFEDEFEGPNTHSARGIVSMANKGKNTNSSQFFITYRPASHLDRKHTIFAKVIEGQDTTLTAMENVATDGSDRPLNKIVIKD 480          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: BPPI_STRP6 (Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase OS=Streptococcus pyogenes serotype M6 GN=M6_Spy1377 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.389e-13
Identity = 63/180 (35.00%), Postives = 81/180 (45.00%), Query Frame = -2
Query:  312 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT---------------------------TSWLDGRHVVFGKVLSG-----MDVVYKVEAEGRQNGTPKSKVVV 755
            G + + LF    PKT  NF        G+ K G   +Y G  FHRIIP FM+Q            +SIYGE F DE     +   G LSMANAGP+TNGSQFFI   +                           T  LD RH VFG+++       +D++  VE  G Q+  PK  V++
Sbjct:  297 GDMTLVLFPDHAPKTVANFL-------GLAKEG---YYDGIIFHRIIPEFMIQGGDPTGTGMGG-QSIYGESFEDEFSDELYNLRGALSMANAGPNTNGSQFFIVQNSKIPYAKKELERGGWPTPIAAAYAENGGTPHLDRRHTVFGQLVDETSFQVLDLIAGVET-GAQD-KPKEDVII 463          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: CWC27_RHIOR (Peptidyl-prolyl isomerase cwc27 OS=Rhizopus oryzae GN=cwc27 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.120e-13
Identity = 50/146 (34.25%), Postives = 72/146 (49.32%), Query Frame = -2
Query:  330 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG--MDVVYKVEAEGRQNGTP 758
            +G I + L+GK  P+   NF  LC             +Y  + FHRI+P F++Q            ES+Y + FPDE + +L+    GL+ +AN G + NGSQFFIT      L  RH +FG+V      +V+   E E  +N  P
Sbjct:   21 SGDIEIELWGKEAPRATRNFIQLCLEG----------YYDNTIFHRIVPGFLVQGGDPTGTGQGG-ESVYEDGFPDEFHSRLRFNRRGLVGVANTGQNDNGSQFFITLDRADELTKRHTLFGRVAGDTLFNVMKMTELEIDENERP 155          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIL2_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizosaccharomyces pombe GN=cyp8 PE=2 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 5.322e-13
Identity = 44/116 (37.93%), Postives = 64/116 (55.17%), Query Frame = -2
Query:  306 HYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVAD 647
            +Y+ + FHR I  FM+Q            +SI+G+ F DE    LKH   G++SMAN G +TNGSQFFI       LD +H +FG+V+ G++V+  +E      N  PK  + + D
Sbjct:  311 YYRNTIFHRNIARFMIQGGDPSGTGRGG-QSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPKLPIKLED 425          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIL3_USTMA (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ustilago maydis GN=CYP10 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.951e-13
Identity = 48/128 (37.50%), Postives = 64/128 (50.00%), Query Frame = -2
Query:  375 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMD 755
            G I + +F  A P+ AENF   C              Y    +HR I SFM+Q            +SI+G+ F DE    LK    G+++ ANAGPDTN SQFFIT      LDG++ + GKV+ G +
Sbjct:   10 GDIKVEVFCDATPRAAENFLGHCAAGT----------YNDVKWHRNIKSFMIQTGDPTGTGKGG-QSIWGKPFADEIRSSLKFDRRGIVACANAGPDTNKSQFFITYAKQPHLDGKYTIIGKVIDGAE 126          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPI1_STAES (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0648 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.079e-13
Identity = 55/153 (35.95%), Postives = 66/153 (43.14%), Query Frame = -2
Query:  381 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT----------------------------TSWLDGRHVVFGKVLSG 755
            G +   LF    PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYG  F DE         G LSMANAGP+TNGSQFFI  +                             T WLD +H VFG+++ G
Sbjct:   25 GDMTFKLFPDIAPKTVENFVTH-------SKNG---YYDGVTFHRVINDFMVQGGDPTATGMGG-ESIYGSAFEDEFSLEAFNLYGALSMANAGPNTNGSQFFIVQMKEVPENMLSQLADGGWPQPIVEAYGEKGGTPWLDQKHTVFGQLIEG 166          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPI1_STAEQ (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0540 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.079e-13
Identity = 55/153 (35.95%), Postives = 66/153 (43.14%), Query Frame = -2
Query:  381 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT----------------------------TSWLDGRHVVFGKVLSG 755
            G +   LF    PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYG  F DE         G LSMANAGP+TNGSQFFI  +                             T WLD +H VFG+++ G
Sbjct:   25 GDMTFKLFPDIAPKTVENFVTH-------SKNG---YYDGVTFHRVINDFMVQGGDPTATGMGG-ESIYGSAFEDEFSLEAFNLYGALSMANAGPNTNGSQFFIVQMKEVPENMLSQLADGGWPQPIVEAYGEKGGTPWLDQKHTVFGQLIEG 166          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPI1_STAHJ (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH1997 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.186e-12
Identity = 54/153 (35.29%), Postives = 66/153 (43.14%), Query Frame = -2
Query:  381 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT----------------------------TSWLDGRHVVFGKVLSG 755
            G +   LF    PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYG  F DE         G LSMANAGP+TNGSQFF+  +                             T WLD +H VFG+++ G
Sbjct:   25 GDMTFKLFPDIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGSFEDEFSLEAFNLYGALSMANAGPNTNGSQFFVVQMKEVPESMVNQLVDGGWPEPIAKAYADNGGTPWLDQKHTVFGQLIEG 166          
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: CWC27_CRYNE (Peptidyl-prolyl isomerase CWC27 OS=Cryptococcus neoformans GN=CWC27 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.549e-12
Identity = 49/126 (38.89%), Postives = 64/126 (50.79%), Query Frame = -2
Query:  387 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGP-DTNGSQFFITTVTTSWLDGRHVVFGKVL 758
            AG I + L+GK  PK   NF AL              +Y G  FHR++P F++Q            ES YGE F DE + +LK    GLL MAN G  ++N SQFFIT      L  +H +FGK++
Sbjct:   21 AGEIEVELWGKECPKAVRNFLALTMEG----------YYDGVIFHRVVPGFIIQSGDPTGTGMGG-ESFYGEPFEDEIHGRLKFNRRGLLGMANNGSRNSNTSQFFITLDAAPELTNKHTMFGKIV 135          
The following BLAST results are available for this feature:
BLAST of CV884526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
PPIL2_USTMA4.814e-1440.27Peptidyl-prolyl cis-trans isomerase-like 2 OS=Usti... [more]
PPIL2_NEUCR8.211e-1434.32Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neur... [more]
BPPI_STRP62.389e-1335.00Putative bifunctional phosphatase/peptidyl-prolyl ... [more]
CWC27_RHIOR3.120e-1334.25Peptidyl-prolyl isomerase cwc27 OS=Rhizopus oryzae... [more]
PPIL2_SCHPO5.322e-1337.93Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizo... [more]
PPIL3_USTMA6.951e-1337.50Peptidyl-prolyl cis-trans isomerase-like 3 OS=Usti... [more]
PPI1_STAES9.079e-1335.95Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAEQ9.079e-1335.95Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAHJ1.186e-1235.29Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
CWC27_CRYNE1.549e-1238.89Peptidyl-prolyl isomerase CWC27 OS=Cryptococcus ne... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884526 ID=CV884526; Name=CV884526; organism=Citrus sinensis; type=EST; length=825bp
TTTTTTTTTTTTTTTTTGATATGGATTCCCGCATTCGCGTACTTATTTCG
GGTGCTTCCATAAGCCTTCTTCTACACAAGTTAGAAAAGAAACACTAAAT
GTGATGAGATAGCTATCAGAGAAAAGGATCCCCTTAAAATGAAGCACCAG
CTTGGCAAACAACCTAGGACATTTTAAAATGTCTATTACATGATAAATAG
GCAAATTATGAGTATCTTCATGAAGGTTGAAAAGACGAGAGGACTAAAAA
GGGGTATAGCGTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCA
CCGCTGTCTGCAACGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCC
TTCAGCTTCAACCTTGTAAACTACATCCATCCCCGATAGCACCTTTCCAA
ATACAACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAG
AATTGTGAACCATTGGTGTCTGGACCAGCATTTGCCATTGACAAAAGCCC
TGGGCCAGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCAT
AAATTGACTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGA
AGCATAAAGCTGGGAATAATCCTATGGAACGTACTTCCCTTGTAGTGGAG
TGGCTTCCCGCTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGA
AATTTTCTGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATA
CGTCCGGCAGGTTTTCCAGCAATCTCAACGTCAAAGTAAACTTTGTTTGT
GATTTCTTTCAAATTCTGATCCGAT
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