CV884526

Overview
NameCV884526
Unique NameCV884526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2181 contig Csv1_Contig2181:156..978. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIA_PONPY (Peptidyl-prolyl cis-trans isomerase A OS=Pongo pygmaeus GN=PPIA PE=2 SV=4)

HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49
Identity = 98/165 (59.39%), Postives = 114/165 (69.09%), Query Frame = -2 
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 791
            V+FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q           G+SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G +NG    K+ +AD G+
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQ 163
[Close]
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIA_PIG (Peptidyl-prolyl cis-trans isomerase A OS=Sus scrofa GN=PPIA PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49
Identity = 98/165 (59.39%), Postives = 114/165 (69.09%), Query Frame = -2 
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 791
            V+FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q           G+SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G +NG    K+ +AD G+
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQ 163
[Close]
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIA_PAPAN (Peptidyl-prolyl cis-trans isomerase A OS=Papio anubis GN=PPIA PE=2 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49
Identity = 98/165 (59.39%), Postives = 114/165 (69.09%), Query Frame = -2 
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 791
            V+FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q           G+SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G +NG    K+ +AD G+
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQ 163
[Close]
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIA_PANTR (Peptidyl-prolyl cis-trans isomerase A OS=Pan troglodytes GN=PPIA PE=3 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49
Identity = 98/165 (59.39%), Postives = 114/165 (69.09%), Query Frame = -2 
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 791
            V+FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q           G+SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G +NG    K+ +AD G+
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQ 163
[Close]
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIA_PANPA (Peptidyl-prolyl cis-trans isomerase A OS=Pan paniscus GN=PPIA PE=3 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49
Identity = 98/165 (59.39%), Postives = 114/165 (69.09%), Query Frame = -2 
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 791
            V+FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q           G+SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G +NG    K+ +AD G+
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQ 163
[Close]
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIA_MACMU (Peptidyl-prolyl cis-trans isomerase A OS=Macaca mulatta GN=PPIA PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49
Identity = 98/165 (59.39%), Postives = 114/165 (69.09%), Query Frame = -2 
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 791
            V+FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q           G+SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G +NG    K+ +AD G+
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQ 163
[Close]
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIA_HYLSY (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates syndactylus GN=PPIA PE=3 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49
Identity = 98/165 (59.39%), Postives = 114/165 (69.09%), Query Frame = -2 
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 791
            V+FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q           G+SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G +NG    K+ +AD G+
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQ 163
[Close]
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLE (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates leucogenys GN=PPIA PE=3 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49
Identity = 98/165 (59.39%), Postives = 114/165 (69.09%), Query Frame = -2 
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 791
            V+FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q           G+SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G +NG    K+ +AD G+
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQ 163
[Close]
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLA (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates lar GN=PPIA PE=3 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49
Identity = 98/165 (59.39%), Postives = 114/165 (69.09%), Query Frame = -2 
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 791
            V+FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q           G+SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G +NG    K+ +AD G+
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQ 163
[Close]
BLAST of CV884526 vs. ExPASy Swiss-Prot
Match: PPIA_HUMAN (Peptidyl-prolyl cis-trans isomerase A OS=Homo sapiens GN=PPIA PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49
Identity = 98/165 (59.39%), Postives = 114/165 (69.09%), Query Frame = -2 
Query:  297 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 791
            V+FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q           G+SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G +NG    K+ +AD G+
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQ 163
The following BLAST results are available for this feature:
BLAST of CV884526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
PPIA_PONPY2.069e-4959.39Peptidyl-prolyl cis-trans isomerase A OS=Pongo pyg... [more]
PPIA_PIG2.069e-4959.39Peptidyl-prolyl cis-trans isomerase A OS=Sus scrof... [more]
PPIA_PAPAN2.069e-4959.39Peptidyl-prolyl cis-trans isomerase A OS=Papio anu... [more]
PPIA_PANTR2.069e-4959.39Peptidyl-prolyl cis-trans isomerase A OS=Pan trogl... [more]
PPIA_PANPA2.069e-4959.39Peptidyl-prolyl cis-trans isomerase A OS=Pan panis... [more]
PPIA_MACMU2.069e-4959.39Peptidyl-prolyl cis-trans isomerase A OS=Macaca mu... [more]
PPIA_HYLSY2.069e-4959.39Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLE2.069e-4959.39Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLA2.069e-4959.39Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HUMAN2.069e-4959.39Peptidyl-prolyl cis-trans isomerase A OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884526 ID=CV884526; Name=CV884526; organism=Citrus sinensis; type=EST; length=825bp
TTTTTTTTTTTTTTTTTGATATGGATTCCCGCATTCGCGTACTTATTTCG
GGTGCTTCCATAAGCCTTCTTCTACACAAGTTAGAAAAGAAACACTAAAT
GTGATGAGATAGCTATCAGAGAAAAGGATCCCCTTAAAATGAAGCACCAG
CTTGGCAAACAACCTAGGACATTTTAAAATGTCTATTACATGATAAATAG
GCAAATTATGAGTATCTTCATGAAGGTTGAAAAGACGAGAGGACTAAAAA
GGGGTATAGCGTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCA
CCGCTGTCTGCAACGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCC
TTCAGCTTCAACCTTGTAAACTACATCCATCCCCGATAGCACCTTTCCAA
ATACAACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAG
AATTGTGAACCATTGGTGTCTGGACCAGCATTTGCCATTGACAAAAGCCC
TGGGCCAGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCAT
AAATTGACTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGA
AGCATAAAGCTGGGAATAATCCTATGGAACGTACTTCCCTTGTAGTGGAG
TGGCTTCCCGCTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGA
AATTTTCTGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATA
CGTCCGGCAGGTTTTCCAGCAATCTCAACGTCAAAGTAAACTTTGTTTGT
GATTTCTTTCAAATTCTGATCCGAT
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