CV884525

Overview
NameCV884525
Unique NameCV884525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIA_NEOCA (Peptidyl-prolyl cis-trans isomerase OS=Neospora caninum PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.997e-35
Identity = 84/166 (50.60%), Postives = 99/166 (59.64%), Query Frame = 2
Query:  158 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLS-GMDVVYKVEAEGRQNGTPKSXVVVADSG 652
            K + D+EI G+ AGRIV+ L G  VPKT +NF         IG   K   YKGSTFHR+I  FM+Q             SIYG +F DENF LKH   G++SMANAGP+TNGSQFFITTV T WLDGRHVVFGK+ +     V  +EA G   G P     + D G
Sbjct:   24 KAFMDIEIDGESAGRIVLELRGDVVPKTVKNF---------IGLFDK---YKGSTFHRVIADFMIQGGDFENHNGTGGHSIYGPRFEDENFTLKHDR-GVISMANAGPNTNGSQFFITTVKTEWLDGRHVVFGKITNDSWPTVQAIEALGSSGGRPSKIAKITDIG 176          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: CYP9_CAEBR (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis briggsae GN=cyn-9 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.811e-35
Identity = 79/176 (44.89%), Postives = 107/176 (60.80%), Query Frame = 2
Query:  140 LKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKP-LHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG---MDVVYKVEAEGRQNGTPKSXVVVADSGE 655
            +  +  +V+ D+ +  KP GRI + LF    PKT ENFRALCTGE G+  + K  LHYKG+  HR++  FM+Q             SIYG  F DE F LKH+ P LLSMAN GP++N SQFFITT      +G+HVVFG+V+ G   +DV+  +E +G+    P + V + +SGE
Sbjct:    1 MSSLEKRVFLDMALDEKPIGRIEIKLFTSEAPKTCENFRALCTGEVGMAPNNKARLHYKGNEIHRVVKKFMIQGGDITDGDGRGGFSIYGRYFDDEKFVLKHSKPYLLSMANKGPNSNSSQFFITTAPAPHCNGKHVVFGEVIKGREVVDVLDNLEVDGKSK--PIAKVRIFNSGE 174          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.589e-35
Identity = 84/181 (46.41%), Postives = 111/181 (61.33%), Query Frame = 2
Query:  122 KKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYG-EKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE--AEGRQNGTPKSXVVVADSGE 655
            KKS+Q  + +   V+FD+ I   P GR+ M LF   VP+TAENFR LCTGE    ++G P  YK   FHR+I  FM+Q              IYG ++F DENF  KHTG GLLSMAN+GP++NG QFFIT     +LDG+HVVFG+++ G+  + K+E  A G  N  PK  V + + G+
Sbjct:    3 KKSNQVERPV---VFFDISIGDVPVGRMKMELFSDIVPRTAENFRQLCTGE--YKRNGVPQGYKNCLFHRVIKDFMVQGGDFIKGDGTGAMCIYGGDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLVDGLLTLRKIENVATG-PNNRPKLPVKITECGQ 177          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 4.164e-33
Identity = 79/156 (50.64%), Postives = 92/156 (58.97%), Query Frame = 2
Query:  191 PAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSXVVVADSGE 655
            PAGR+   LF   VP+T+ENFR LCTGE     +  P  YK S FHRII  FM Q             SIYG+KF DENF LKH   GLLSMAN+GP TNG QFFIT     +LDG+HVVFGKV+ G+  + K+E      N  PK  V +   GE
Sbjct:    2 PAGRLKCELFSDIVPRTSENFRQLCTGE--FRPNHVPEGYKNSIFHRIIKDFMCQGGDFINADGTGSRSIYGDKFDDENFTLKHDKAGLLSMANSGPGTNGCQFFITAQPCPFLDGKHVVFGKVVDGLLTLRKMENVPTGANNRPKMAVRITQCGE 155          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: CYP9_CAEEL (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis elegans GN=cyn-9 PE=2 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 4.164e-33
Identity = 77/168 (45.83%), Postives = 101/168 (60.12%), Query Frame = 2
Query:  158 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKP-LHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVV-YKVEAEGRQNGTPKSXVVVADSGE 655
            +V+ D+ +     GRI + LF +  PKT ENFRALCTGE G+  + K  LHYK + FHRI+  FM+Q             SIYG  F DE FKLKH+ P LLSMAN GP++N SQFFITT      +G+HVVFG+V+ G +VV Y           P + V++++ GE
Sbjct:    6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRIVKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNLAVDDKSKPLAKVLISNCGE 173          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIL6_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos taurus GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.285e-31
Identity = 66/167 (39.52%), Postives = 96/167 (57.49%), Query Frame = 2
Query:  155 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSXVVVADSGE 655
            N V+ D+ I   P GR++  L+    PKT +NF+ LCTG+ G  +SG  LHY GS FHR++ +  +Q            ESIYG  F DENF + H   G+L M N G  +NGSQF+IT     +LD ++V FG+++ G DV++ +E+   +N  P    V+  SG+
Sbjct:  138 NFVFLDISIDLYPIGRLIFELYSDTCPKTCKNFQILCTGKAGFSQSGIKLHYTGSIFHRVVRNGWVQGGDIVAGKGDNGESIYGPTFEDENFSVPHNKRGVLGMVNKGRHSNGSQFYITLQAAPYLDKKYVAFGQLIEGTDVLHHLESVPTENERPIQNCVITASGQ 304          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIL6_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo sapiens GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.091e-31
Identity = 73/197 (37.06%), Postives = 106/197 (53.81%), Query Frame = 2
Query:   77 LWAIVLLATFSSIQAKKSDQNLKEITNK----VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSXVVVADSGE 655
            +W IV +   +   A   D + K + +     V+ D+ I   P GR++  L+    PKT +NF+ LCTG+ G  + G  LHYK S FHRI+ +  +Q            ESIYG  F DENF + H   G+L MAN G  +NGSQF+IT   T +LD + V FG+++ G +V+ ++E    QN  P     + DSG+
Sbjct:  112 VWDIVDIKPSALYDALTEDFSAKFLRDTKHDFVFLDICIDSSPIGRLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYGKGDNGESIYGPTFEDENFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAFGQLIEGTEVLKQLELVPTQNERPIHMCRITDSGD 308          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIB_TREPA (Probable peptidyl-prolyl cis-trans isomerase OS=Treponema pallidum GN=ppiB PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.410e-26
Identity = 67/135 (49.63%), Postives = 83/135 (61.48%), Query Frame = 2
Query:  197 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA 598
            G IV+ LF +  P T  NF  L  G   + K G+P  Y+G TFHR+I  FM+Q                G +FPDE +  L+H  PG+LSMANAGP TNGSQFFIT V T WLDG+H VFGKV+ GM+VV+ + A
Sbjct:   49 GTIVLSLFFEKAPLTVCNFVGLAEGTLAVCK-GRPF-YQGLTFHRVIKDFMIQGGDPQGNGTGGP----GYQFPDECDPALRHDSPGVLSMANAGPGTNGSQFFITHVATPWLDGKHTVFGKVVEGMEVVHAIIA 177          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIL1_EMENI (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emericella nidulans GN=cyp1 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.451e-25
Identity = 62/133 (46.62%), Postives = 80/133 (60.15%), Query Frame = 2
Query:  197 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKV 592
            G   + L+    PKT +NF  L   ++G        +Y    FHRIIP+FM+Q             SIYGEKF DE    LKHTG G+LSMAN+GP+TNGSQFFIT   T WLDG+H +FG+V SGM ++ ++
Sbjct:   12 GSFTVELYNSHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIRSDLKHTGAGILSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRIIQRM 133          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.451e-25
Identity = 62/133 (46.62%), Postives = 80/133 (60.15%), Query Frame = 2
Query:  197 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKV 592
            G   + L+    PKT +NF  L   ++G        +Y    FHRIIP+FM+Q             SIYGEKF DE    LKHTG G+LSMAN+GP+TNGSQFF+T   T WLDG+H +FG+V SGM V+ ++
Sbjct:   12 GSFTVELYNSHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIRADLKHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMRVIQRM 133          
The following BLAST results are available for this feature:
BLAST of CV884525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
PPIA_NEOCA1.997e-3550.60Peptidyl-prolyl cis-trans isomerase OS=Neospora ca... [more]
CYP9_CAEBR5.811e-3544.89Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIH_RHIOR7.589e-3546.41Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
PPIH_USTMA4.164e-3350.64Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]
CYP9_CAEEL4.164e-3345.83Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIL6_BOVIN2.285e-3139.52Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos ... [more]
PPIL6_HUMAN5.091e-3137.06Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo... [more]
PPIB_TREPA8.410e-2649.63Probable peptidyl-prolyl cis-trans isomerase OS=Tr... [more]
PPIL1_EMENI5.451e-2546.62Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emer... [more]
PPIL1_ASPOR5.451e-2546.62Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884525 ID=CV884525; Name=CV884525; organism=Citrus sinensis; type=EST; length=775bp
CCCAAAGTGAGTGACTGCGAAACGAGAAACAACGAAGTGATACATGGCTT
CGACAAAATTTCTTCCACTCACGATGCTATGGGCTATTGTCCTGTTGGCC
ACTTTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAAT
CACAAACAAAGTTTACTTTGACGTTGAGATTGCTGGAAAACCTGCCGGAC
GTATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAAT
TTCCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGCGGGAAGCC
ACTCCACTACAAGGGAAGTACGTTCCATAGGATTATTCCCAGCTTTATGC
TTCAAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATT
TATGGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACTGGCCC
AGGGCTTTTGTCAATGGCAAATGCTGGTCCAGACACCAATGGTTCACAAT
TCTTCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTA
TTTGGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGCTGA
AGGGAGGCAGAATGGCACTCCGAAGAGCANAGTCGTCGTTGCAGACAGCG
GTGAACTTCCTCTGTGATTTCCCCCATAATTATATAATTACGCTATACAC
CTTTTTAGTCCTCTCGTCTTTTCAACCTTCATGAAGATACTCATAATTTG
CCTATTTATCATGTAATAGACATTT
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