CV884525

Overview
NameCV884525
Unique NameCV884525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIL3_EMENI (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Emericella nidulans GN=cyp10 PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.540e-11
Identity = 58/172 (33.72%), Postives = 73/172 (42.44%), Query Frame = 2
Query:  197 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXE----------------SIYGEKFPDENF---KLKHTGPGLLSMAN--------------AGPDTNGSQFFITTVTTSWLDGRHVVFGKVLS------GMDVVYKVE 595
            G + + LF +AVPKTAENF ALC              Y  + FHR+IP FM+Q            +                SIY     ++      L+H   G+LSMA+               GP  NGSQFFIT      LDG   VFGKVL+      G DV+ K+E
Sbjct:   10 GDLKVELFCEAVPKTAENFIALCAAGA----------YNDTPFHRLIPGFMIQGGDISLGPAANSQGTTPMLPFDDIPKGGTSIYHPSALNQEIHLPALRHNTRGILSMASRPVKNQTAPGSQGATGPTINGSQFFITFAAAPHLDGSSTVFGKVLNLTAEDEGGDVLSKLE 171          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIL4_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus musculus GN=Ppil4 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.851e-11
Identity = 46/141 (32.62%), Postives = 67/141 (47.52%), Query Frame = 2
Query:  197 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENF--------KLKHTGPGLLSMANAGPDTNGSQFFITT-VTTSWLDGRHVVFGKVLSGMDVVYKV 592
            G +V+ L+ +  P+   NF  LC          K  +Y     H +   F++Q            ESI+G+ + D+          ++KH   G +SM N G D +GSQF ITT     +LDG H VFG+V  GMD+V K+
Sbjct:   10 GDVVIDLYTEERPRACLNFLKLC----------KIKYYNYCLIHNVQRDFIIQTGDPTGTGRGG-ESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVTEGMDIVKKI 139          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIL4_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo sapiens GN=PPIL4 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.642e-11
Identity = 45/141 (31.91%), Postives = 67/141 (47.52%), Query Frame = 2
Query:  197 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENF--------KLKHTGPGLLSMANAGPDTNGSQFFITT-VTTSWLDGRHVVFGKVLSGMDVVYKV 592
            G +V+ L+ +  P+   NF  LC          K  +Y     H +   F++Q            ESI+G+ + D+          ++KH   G +SM N G D +GSQF ITT     +LDG H VFG+V  GMD++ K+
Sbjct:   10 GDVVIDLYTEERPRACLNFLKLC----------KIKYYNYCLIHNVQRDFIIQTGDPTGTGRGG-ESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVTEGMDIIKKI 139          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.981e-11
Identity = 49/125 (39.20%), Postives = 62/125 (49.60%), Query Frame = 2
Query:  194 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL 565
            +G I + L  +  PK   NF  L   +KG        +YK  TFHR I  FM+Q            ESI+G+ F DE    LKH   G LSMAN G +TN SQFFI       L+ +H +FG V+
Sbjct:  308 SGDINLELQTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPSGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVI 421          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus fumigatus GN=cyp8 PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.981e-11
Identity = 48/124 (38.71%), Postives = 61/124 (49.19%), Query Frame = 2
Query:  197 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL 565
            G + + L  +  PK   NF  L   +KG        +YK  TFHR I  FM+Q            ESI+G+ F DE    LKH   G LSMAN G +TN SQFFI       L+ +H +FG V+
Sbjct:  322 GDVNLELHTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPTGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVI 434          
The following BLAST results are available for this feature:
BLAST of CV884525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
PPIL3_EMENI1.540e-1133.72Peptidyl-prolyl cis-trans isomerase-like 3 OS=Emer... [more]
PPIL4_MOUSE5.851e-1132.62Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus ... [more]
PPIL4_HUMAN7.642e-1131.91Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo... [more]
PPIL2_ASPOR9.981e-1139.20Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
PPIL2_ASPFU9.981e-1138.71Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884525 ID=CV884525; Name=CV884525; organism=Citrus sinensis; type=EST; length=775bp
CCCAAAGTGAGTGACTGCGAAACGAGAAACAACGAAGTGATACATGGCTT
CGACAAAATTTCTTCCACTCACGATGCTATGGGCTATTGTCCTGTTGGCC
ACTTTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAAT
CACAAACAAAGTTTACTTTGACGTTGAGATTGCTGGAAAACCTGCCGGAC
GTATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAAT
TTCCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGCGGGAAGCC
ACTCCACTACAAGGGAAGTACGTTCCATAGGATTATTCCCAGCTTTATGC
TTCAAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATT
TATGGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACTGGCCC
AGGGCTTTTGTCAATGGCAAATGCTGGTCCAGACACCAATGGTTCACAAT
TCTTCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTA
TTTGGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGCTGA
AGGGAGGCAGAATGGCACTCCGAAGAGCANAGTCGTCGTTGCAGACAGCG
GTGAACTTCCTCTGTGATTTCCCCCATAATTATATAATTACGCTATACAC
CTTTTTAGTCCTCTCGTCTTTTCAACCTTCATGAAGATACTCATAATTTG
CCTATTTATCATGTAATAGACATTT
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