CV884525

Overview
NameCV884525
Unique NameCV884525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2181 contig Csv1_Contig2181:30..804. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.683e-50
Identity = 98/177 (55.37%), Postives = 126/177 (71.19%), Query Frame = 2
Query:  125 KSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQN-GTPKSXVVVADSG 652
            +S+ N  ++T+KV+FD+E+ GKP  RI++GLFGK VPKT ENF+ L  G +   K G+   YKGSTFHR+I SFM+Q             SIYG++FPDENFKL+H G G LSMANAGPDTNGSQFFITTV TSWLDG+HVVFGKV+ GM++V ++E+E   +   P   + +A  G
Sbjct:   22 RSEANGPKVTDKVFFDIEVDGKPLARIIIGLFGKTVPKTVENFKQLSIGTQL--KDGRTASYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVVEGMNIVRQIESETTDSRDRPVKSIKIASCG 196          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.683e-50
Identity = 101/163 (61.96%), Postives = 114/163 (69.94%), Query Frame = 2
Query:  164 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSXVVVADSG 652
            +FDV   G+P GRIV  LF   VPKTA NFRALCTGEKG G       Y GSTFHR+IP FMLQ            +SIYGEKFPDENF LKH  PGLLSMANAGP+TNGSQFFITTV T WLDG+HVVFG+V  GMDVV KVE+ G  +G  ++ +V+   G
Sbjct:    5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYG-------YAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCG 160          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIF_RAT (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Rattus norvegicus GN=Ppif PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.198e-50
Identity = 97/165 (58.79%), Postives = 115/165 (69.70%), Query Frame = 2
Query:  161 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSXVVVADSGE 655
            VY DV   G+P GR+V+ L    VPKTAENFRALCTGEKG G       YKGSTFHR+IP+FM Q            +SIYG +FPDENF LKH GPG+LSMANAGP+TNGSQFFI T+ T WLDG+HVVFG V  GMDVV K+E+ G ++G     +V+ D G+
Sbjct:   47 VYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPAFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGKTSKKIVITDCGQ 204          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.198e-50
Identity = 105/166 (63.25%), Postives = 114/166 (68.67%), Query Frame = 2
Query:  158 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSXVVVADSGE 655
            +VYFD+ I  KP GRIV  LF   VPKTAENFRALCTGEKG GKSGKPL Y+GS FHRII +FM+Q            ESIYGEKF DENF LKH  P LLSMANAGP TNGSQFFITTV T  LDG+HVVFGKVL G  VV  +E     +  P    V+A  GE
Sbjct:    5 RVYFDITIGNKPEGRIVFELFKDIVPKTAENFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDENFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKVLKGKAVVRALENLETVSDRPVEDAVIAKCGE 170          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPID_ASPFU (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus fumigatus GN=cpr6 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.198e-50
Identity = 100/170 (58.82%), Postives = 118/170 (69.41%), Query Frame = 2
Query:  158 KVYFDVEIAGKPAGRIVMGL----FGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSXVVVADSGE 655
            +VYFD++I  + AGRI + L    F   VPKTAENFRALCTGEKG+GK  KPL YKGS FHR+I  FM+Q            ESIYGEKFPDENF+LKH  P LLSMAN+GP TNGSQFFITTV T  LDG+HVVFG+V++G  +V K+E    Q   P + V + D GE
Sbjct:    9 RVYFDIQIGSQKAGRIALELVRLPFNDVVPKTAENFRALCTGEKGVGKQRKPLSYKGSIFHRVIKQFMIQGGDFTNFNGTGGESIYGEKFPDENFELKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSIVRKIENMPTQADKPTTDVTIVDCGE 178          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 199.134 bits (505), Expect = 2.198e-50
Identity = 101/171 (59.06%), Postives = 117/171 (68.42%), Query Frame = 2
Query:  146 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSXVVVADSGE 655
            ++T KVYFD +I  +P GR+  GLFGK VPKT +NF AL TGEKG G       YK S FHR+I  FM+Q            +SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQFFITTV TSWLDG+HVVFGKVL GMDVV KVE  +      P   V++ D G+
Sbjct:   41 KVTVKVYFDFQIGDEPVGRVTFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVIIVDCGK 204          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.198e-50
Identity = 103/181 (56.91%), Postives = 125/181 (69.06%), Query Frame = 2
Query:  119 AKKSDQNLK--EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSXVVVADSG 652
            A ++D+  K  ++T KV+FD+ +  + AGR+V+GLFGK VPKT ENF AL TGEKG G       +KGS FHR+I  FM+Q            +SIYG++FPDENFKLKH GPG +SMANAG DTNGSQFFITTV T+WLDG+HVVFGKVL GMDVV KVE  +      P   V +AD G
Sbjct:   21 ASRADERKKGPKVTAKVFFDLRVGEEDAGRVVIGLFGKTVPKTVENFVALATGEKGFG-------FKGSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVTIADCG 194          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIF_MOUSE (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Mus musculus GN=Ppif PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.871e-50
Identity = 97/165 (58.79%), Postives = 114/165 (69.09%), Query Frame = 2
Query:  161 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSXVVVADSGE 655
            VY DV   G+P GR+V+ L    VPKTAENFRALCTGEKG G       YKGSTFHR+IP+FM Q             SIYG +FPDENF LKH GPG+LSMANAGP+TNGSQFFI T+ T WLDG+HVVFG V  GMDVV K+E+ G ++G     +V+ D G+
Sbjct:   47 VYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPAFMCQAGDFTNHNGTGGRSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGKTSKKIVITDCGQ 204          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: PPIB_BOVIN (Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus GN=PPIB PE=1 SV=4)

HSP 1 Score: 197.978 bits (502), Expect = 4.896e-50
Identity = 103/173 (59.54%), Postives = 121/173 (69.94%), Query Frame = 2
Query:  146 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA---EGRQNGTPKSXVVVADSGE 655
            ++T KVYFD+ I  +  GR+V+GLFGK VPKT +NF AL TGEKG G       YK S FHR+I  FM+Q            +SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQFFITTV T+WLDG+HVVFGKVL GMDVV KVE+   +GR    P   V +AD G+
Sbjct:   41 KVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFG-------YKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVESTKTDGRDK--PLKDVTIADCGK 204          
BLAST of CV884525 vs. ExPASy Swiss-Prot
Match: CYP5_CAEEL (Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhabditis elegans GN=cyn-5 PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 4.896e-50
Identity = 106/179 (59.22%), Postives = 119/179 (66.48%), Query Frame = 2
Query:  119 AKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSXVVVADSG 652
            A+  D    ++T+KVYFD+EI GKP GRIV+GLFGK VPKTA NF  L    KG G       Y GS FHR+I  FM+Q             SIYGEKF DENFKLKH G G LSMANAG DTNGSQFFITTV T WLDGRHVVFGK+L GMDVV K+E   +  G  PK  V++A SG
Sbjct:   17 AQGDDAKGPKVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKGEG-------YPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKILEGMDVVRKIEQTEKLPGDRPKQDVIIAASG 188          
The following BLAST results are available for this feature:
BLAST of CV884525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
PPIB_SCHMA1.683e-5055.37Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
CYPH_SCHPO1.683e-5061.96Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]
PPIF_RAT2.198e-5058.79Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPID_RHIOR2.198e-5063.25Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
PPID_ASPFU2.198e-5058.82Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPIB_RAT2.198e-5059.06Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]
PPIB_CHICK2.198e-5056.91Peptidyl-prolyl cis-trans isomerase B OS=Gallus ga... [more]
PPIF_MOUSE2.871e-5058.79Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIB_BOVIN4.896e-5059.54Peptidyl-prolyl cis-trans isomerase B OS=Bos tauru... [more]
CYP5_CAEEL4.896e-5059.22Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhab... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884525 ID=CV884525; Name=CV884525; organism=Citrus sinensis; type=EST; length=775bp
CCCAAAGTGAGTGACTGCGAAACGAGAAACAACGAAGTGATACATGGCTT
CGACAAAATTTCTTCCACTCACGATGCTATGGGCTATTGTCCTGTTGGCC
ACTTTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAAT
CACAAACAAAGTTTACTTTGACGTTGAGATTGCTGGAAAACCTGCCGGAC
GTATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAAT
TTCCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGCGGGAAGCC
ACTCCACTACAAGGGAAGTACGTTCCATAGGATTATTCCCAGCTTTATGC
TTCAAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATT
TATGGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACTGGCCC
AGGGCTTTTGTCAATGGCAAATGCTGGTCCAGACACCAATGGTTCACAAT
TCTTCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTA
TTTGGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGCTGA
AGGGAGGCAGAATGGCACTCCGAAGAGCANAGTCGTCGTTGCAGACAGCG
GTGAACTTCCTCTGTGATTTCCCCCATAATTATATAATTACGCTATACAC
CTTTTTAGTCCTCTCGTCTTTTCAACCTTCATGAAGATACTCATAATTTG
CCTATTTATCATGTAATAGACATTT
back to top