CV884518

Overview
NameCV884518
Unique NameCV884518
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSKP_CAPAN (Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 7.467e-89
Identity = 159/216 (73.61%), Postives = 188/216 (87.04%), Query Frame = 1
Query:   40 VESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            +E  NIA+DVT+LIGNTP+VYLN IV GCVA IAAKLE+MEPC SVKDRIG+SMISDAE KGLI+PG++VL+EPTSGNTGIGLAF+AA++ Y+LI+TMPASMSLERR+IL+AFGAELVLTDPAKGMKGAV KAEEIL  TP+AY+LQQF+NPANPKIHYETTGPE+W+ + G+ID LV+            ++LKEKNPNIK+ G+EPTES VLSG
Sbjct:   62 IEGLNIAEDVTQLIGNTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMISDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKAFGAELVLTDPAKGMKGAVSKAEEILNNTPDAYILQQFDNPANPKIHYETTGPEIWEDTKGKIDILVAGIGTGGTISGTGRYLKEKNPNIKIIGVEPTESNVLSG 277          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSKP_SOLTU (Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.408e-87
Identity = 157/216 (72.69%), Postives = 186/216 (86.11%), Query Frame = 1
Query:   40 VESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            +E  NIA+DVT+LIGNTP+VYLN I  GCVA IAAKLE+MEPC SVKDRIG+SMI DAE KGLI+PG++VL+EPTSGNTGIGLAF+AA++ Y+LI+TMPASMSLERR+IL+AFGAELVLTDPAKGMKGAV KAEEIL  TP+AY+LQQF+NPANPKIHYETTGPE+W+ + G+ID LV+            +FLKE+NPNIK+ G+EPTES VLSG
Sbjct:   64 IEGLNIAEDVTQLIGNTPMVYLNTIAKGCVANIAAKLEIMEPCCSVKDRIGFSMIVDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKAFGAELVLTDPAKGMKGAVSKAEEILNNTPDAYILQQFDNPANPKIHYETTGPEIWEDTKGKIDILVAGIGTGGTITGTGRFLKEQNPNIKIIGVEPTESNVLSG 279          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSKP_ARATH (Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2)

HSP 1 Score: 317.005 bits (811), Expect = 5.916e-86
Identity = 152/216 (70.37%), Postives = 183/216 (84.72%), Query Frame = 1
Query:   40 VESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            VE  NIA +  +LIG TP+VYLNN+V GCVA +AAKLE+MEPC SVKDRIGYSMI+DAE KGLITPG+SVL+E TSGNTGIGLAF+AA+K Y+LI+TMPASMSLERR++LRAFGAELVLT+PAKGM GA+QKAEEIL KTPN+YMLQQF+NPANPKIHYETTGPE+W+ + G+ID LV+            +F+KE+ P +K+ G+EPTES +LSG
Sbjct:   70 VEGLNIADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKDRIGYSMITDAEEKGLITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRAFGAELVLTEPAKGMTGAIQKAEEILKKTPNSYMLQQFDNPANPKIHYETTGPEIWEDTRGKIDILVAGIGTGGTITGVGRFIKERKPELKVIGVEPTESAILSG 285          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSKP_SPIOL (Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea GN=CYSK PE=1 SV=2)

HSP 1 Score: 311.227 bits (796), Expect = 3.246e-84
Identity = 151/229 (65.94%), Postives = 186/229 (81.22%), Query Frame = 1
Query:    1 PPSTQVK*S*NMAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            PPST         +E  NIA+DV++LIG TP+VYLNN+  G VA IAAKLE MEPC SVKDRIGYSMI DAE KG+ITPG++ L+EPTSGNTGIGLAF+AAA+ Y++ +TMPASMS+ERR+IL+AFGAELVLTDPAKGMKGAV+KAEEIL KTP++YMLQQF+NPANPKIHYETTGPE+W+ + G++D  V+            ++LKE+NP +++ GIEPTES +LSG
Sbjct:   58 PPST---------IEGLNIAEDVSQLIGKTPMVYLNNVSKGSVANIAAKLESMEPCCSVKDRIGYSMIDDAEQKGVITPGKTTLVEPTSGNTGIGLAFIAAARGYKITLTMPASMSMERRVILKAFGAELVLTDPAKGMKGAVEKAEEILKKTPDSYMLQQFDNPANPKIHYETTGPEIWEDTKGKVDIFVAGIGTGGTISGVGRYLKERNPGVQVIGIEPTESNILSG 277          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSKM_ARATH (Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC PE=1 SV=3)

HSP 1 Score: 308.916 bits (790), Expect = 1.611e-83
Identity = 147/212 (69.34%), Postives = 179/212 (84.43%), Query Frame = 1
Query:   52 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            NIA +V++LIG TP+VYLN+I  GCVA IAAKLE+MEPC SVKDRIGYSM++DAE KG I+PG+SVL+EPTSGNTGIGLAF+AA++ YRLI+TMPASMS+ERR++L+AFGAELVLTDPAKGM GAVQKAEEIL  TP+AYMLQQF+NPANPKIHYETTGPE+W  + G++D  V+            +F+KEKNP  ++ G+EPTES +LSG
Sbjct:  112 NIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSG 323          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK4_ARATH (Probable cysteine synthase, chloroplastic OS=Arabidopsis thaliana GN=At3g03630 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.183e-72
Identity = 135/230 (58.70%), Postives = 178/230 (77.39%), Query Frame = 1
Query:    1 PPSTQVK*S*NMAV-ESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            PP T V    ++A  E+ NIA+DVT+LIG+TP+VYLN + +GC+A IAAKLE MEPC SVKDRIG SMI++AE  G ITP ++VL+EPT+GNTG+G+AF+AAAK Y+LI+TMPAS+++ERR++LRA GAE+VLT+P KG+KGAV KA+EI+ KT NAYM QQF+N AN KIH+ETTGPE+W+ + G +D  V+             FLK  N +IK+ G+EP+E  V+SG
Sbjct:   80 PPVTTVAEEQHIAESETVNIAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCRSVKDRIGLSMINEAENSGAITPRKTVLVEPTTGNTGLGIAFVAAAKGYKLIVTMPASINIERRMLLRALGAEIVLTNPEKGLKGAVDKAKEIVLKTKNAYMFQQFDNTANTKIHFETTGPEIWEDTMGNVDIFVAGIGTGGTVTGTGGFLKMMNKDIKVVGVEPSERSVISG 309          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_SYNY3 (Cysteine synthase OS=Synechocystis sp. (strain PCC 6803) GN=cysK PE=3 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 2.119e-59
Identity = 117/213 (54.93%), Postives = 153/213 (71.83%), Query Frame = 1
Query:   55 IAKDVTELIGNTPLVYLNNI--VNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            IA ++TELIG TPLV LN I  + GC A+I  KLE M P +SVKDRIG +MI+ AE +GLI PG+++LIEPTSGNTGI LA +AAAK Y+LI+TMP +MS ERR +L+A+GA+L LT  ++GM G +++A+E+    PNAYMLQQF+NPANP+IH +TT  E+W+ + G ID LV+              LKEK P+ +   +EP  SPVLSG
Sbjct:    3 IASNITELIGRTPLVRLNRIPLLEGCGAKIVVKLEGMNPAASVKDRIGINMINRAEQEGLIEPGKTLLIEPTSGNTGIALAMVAAAKGYQLILTMPETMSQERRAMLKAYGAKLELTPGSEGMGGCIRRAQELAESLPNAYMLQQFDNPANPQIHQQTTALEIWQDTDGAIDFLVAGVGTGGTITGVASVLKEKKPSFQAIAVEPQNSPVLSG 215          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_MYCTU (Cysteine synthase A OS=Mycobacterium tuberculosis GN=cysK PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.088e-55
Identity = 111/213 (52.11%), Postives = 149/213 (69.95%), Query Frame = 1
Query:   52 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            +IA+D+T+LIG TPLV L  + +G VA I AKLE   P +SVKDRIG +M+  AE  GLI P +++++EPTSGNTGI LA + AA+ YR ++TMP +MSLERR++LRA+GAEL+LT  A GM GA+ KAEE LAKT   Y + QQFENPANP IH  TT  E+W+ + G++D +V+            + +KE+ P+ +   +EP  SPVLSG
Sbjct:    2 SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEE-LAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSG 212          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_MYCBO (Cysteine synthase A OS=Mycobacterium bovis GN=cysK PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.088e-55
Identity = 111/213 (52.11%), Postives = 149/213 (69.95%), Query Frame = 1
Query:   52 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYML-QQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            +IA+D+T+LIG TPLV L  + +G VA I AKLE   P +SVKDRIG +M+  AE  GLI P +++++EPTSGNTGI LA + AA+ YR ++TMP +MSLERR++LRA+GAEL+LT  A GM GA+ KAEE LAKT   Y + QQFENPANP IH  TT  E+W+ + G++D +V+            + +KE+ P+ +   +EP  SPVLSG
Sbjct:    2 SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEE-LAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSG 212          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_MYCLE (Cysteine synthase A OS=Mycobacterium leprae GN=cysK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.135e-55
Identity = 106/212 (50.00%), Postives = 143/212 (67.45%), Query Frame = 1
Query:   52 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            +IA+DVT+L+GNTPLV L  +  G +A + AKLE   P +SVKDRIG +MI  AE  GLI P ++V++EPTSGNTGI LA + AA+ Y  ++TMP +MS+ERR++LRA+GAEL+LT  A GM GA+ KAEE+       ++ QQFENPANP IH  TT  E+W+ + G++D  VS            + +KE+ P  +   +EP  SPVLSG
Sbjct:    2 SIAEDVTQLVGNTPLVRLRRVTEGALADVVAKLESFNPANSVKDRIGVAMIDTAEEAGLIKP-DTVILEPTSGNTGIALAMVCAARGYHCVLTMPETMSIERRMLLRAYGAELILTPGADGMSGAIAKAEELAKSDKRYFIPQQFENPANPAIHAATTAEEVWRDTDGKVDIFVSGIGTGGTITGVARIIKERRPATQFVAVEPAASPVLSG 212          
The following BLAST results are available for this feature:
BLAST of CV884518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CYSKP_CAPAN7.467e-8973.61Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKP_SOLTU1.408e-8772.69Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKP_ARATH5.916e-8670.37Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKP_SPIOL3.246e-8465.94Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKM_ARATH1.611e-8369.34Cysteine synthase, mitochondrial OS=Arabidopsis th... [more]
CYSK4_ARATH2.183e-7258.70Probable cysteine synthase, chloroplastic OS=Arabi... [more]
CYSK_SYNY32.119e-5954.93Cysteine synthase OS=Synechocystis sp. (strain PCC... [more]
CYSK_MYCTU1.088e-5552.11Cysteine synthase A OS=Mycobacterium tuberculosis ... [more]
CYSK_MYCBO1.088e-5552.11Cysteine synthase A OS=Mycobacterium bovis GN=cysK... [more]
CYSK_MYCLE4.135e-5550.00Cysteine synthase A OS=Mycobacterium leprae GN=cys... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A02_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884518 ID=CV884518; Name=CV884518; organism=Citrus sinensis; type=EST; length=689bp
CCACCTTCTACACAAGTCAAGTAATCATAAAACATGGCGGTTGAGAGTAG
CAACATTGCAAAAGATGTTACAGAATTAATTGGCAATACACCATTGGTGT
ATCTCAACAATATTGTCAATGGGTGTGTTGCCCGCATTGCTGCTAAGCTA
GAGATGATGGAACCGTGCTCTAGTGTCAAGGACAGGATTGGTTATAGCAT
GATTTCTGATGCGGAGGCGAAGGGTCTAATAACACCAGGGGAGAGTGTAC
TCATTGAACCTACAAGTGGAAATACTGGGATTGGTTTGGCGTTCATGGCG
GCAGCCAAGCAATACAGGCTTATCATTACAATGCCAGCTTCAATGAGTCT
TGAAAGAAGAATCATTCTTCGAGCATTTGGAGCTGAATTAGTTCTCACCG
ATCCTGCTAAGGGGATGAAAGGGGCTGTTCAGAAGGCAGAGGAGATTCTG
GCTAAAACCCCCAATGCTTACATGCTGCAGCAATTTGAAAACCCTGCCAA
TCCAAAGATCCATTATGAAACTACTGGACCAGAGTTATGGAAAGGGTCAG
GAGGGAGAATCGATGCCCTTGTTTCCGGAATTGGTACTGGTGGCACAATA
ACAGGTGCAGGAAAATTTCTCAAAGAGAAGAACCCCAACATAAAGCTCTA
TGGTATAGAGCCAACTGAAAGTCCTGTTCTATCTGGAGG
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