CV884518

Overview
NameCV884518
Unique NameCV884518
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_SALTY (Cysteine synthase A OS=Salmonella typhimurium GN=cysK PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 7.300e-52
Identity = 110/215 (51.16%), Postives = 150/215 (69.77%), Query Frame = 1
Query:   49 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLK--EKNPNIKLYGIEPTESPVLS 684
            S I +D +  IG+TPLV LN I NG   RI AK+E   P  SVK RIG +MI DAE +G++ PG   L+EPTSGNTGI LA++AAA+ Y+L +TMP +MS+ERR +L+A GA LVLT+ AKGMKGA+QKAEEI+A  P  Y +LQQF NPANP+IH +TTGPE+W+ + G++D  +S            +++K  +   ++    +EPT+SPV++
Sbjct:    2 SKIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVE-LVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIA 212          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_SALTI (Cysteine synthase A OS=Salmonella typhi GN=cysK PE=3 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 7.300e-52
Identity = 110/215 (51.16%), Postives = 150/215 (69.77%), Query Frame = 1
Query:   49 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLK--EKNPNIKLYGIEPTESPVLS 684
            S I +D +  IG+TPLV LN I NG   RI AK+E   P  SVK RIG +MI DAE +G++ PG   L+EPTSGNTGI LA++AAA+ Y+L +TMP +MS+ERR +L+A GA LVLT+ AKGMKGA+QKAEEI+A  P  Y +LQQF NPANP+IH +TTGPE+W+ + G++D  +S            +++K  +   ++    +EPT+SPV++
Sbjct:    2 SKIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVE-LVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIA 212          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_ECOLI (Cysteine synthase A OS=Escherichia coli (strain K12) GN=cysK PE=1 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.245e-51
Identity = 110/215 (51.16%), Postives = 148/215 (68.84%), Query Frame = 1
Query:   49 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKL--YGIEPTESPVLS 684
            S I +D +  IG+TPLV LN I NG   RI AK+E   P  SVK RIG +MI DAE +G++ PG   L+EPTSGNTGI LA++AAA+ Y+L +TMP +MS+ERR +L+A GA LVLT+ AKGMKGA+QKAEEI+A  P  Y +LQQF NPANP+IH +TTGPE+W+ + G++D  ++            +++K       L    +EPT+SPV++
Sbjct:    2 SKIFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVE-LVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIA 212          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_ECO57 (Cysteine synthase A OS=Escherichia coli O157:H7 GN=cysK PE=3 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.245e-51
Identity = 110/215 (51.16%), Postives = 148/215 (68.84%), Query Frame = 1
Query:   49 SNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKL--YGIEPTESPVLS 684
            S I +D +  IG+TPLV LN I NG   RI AK+E   P  SVK RIG +MI DAE +G++ PG   L+EPTSGNTGI LA++AAA+ Y+L +TMP +MS+ERR +L+A GA LVLT+ AKGMKGA+QKAEEI+A  P  Y +LQQF NPANP+IH +TTGPE+W+ + G++D  ++            +++K       L    +EPT+SPV++
Sbjct:    2 SKIFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVE-LVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIA 212          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_BACSU (Cysteine synthase OS=Bacillus subtilis GN=cysK PE=1 SV=3)

HSP 1 Score: 202.216 bits (513), Expect = 2.124e-51
Identity = 111/212 (52.36%), Postives = 149/212 (70.28%), Query Frame = 1
Query:   55 IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSG-GRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            +A  +TELIGNTP+V LN + +   A +  KLE M P SSVKDRIG +MI  AE +G +  G ++ IEPTSGNTGIGLA +AAAK  + I+ MP +MS+ERR +LRA+GAELVLT  A+GMKGA++KAEE LA+    ++ QQF NP+NP+IH +TTG E+ +  G  ++DA V+            + LKE  P+IK+Y +EP++SPVLSG
Sbjct:    4 VANSITELIGNTPIVKLNRLADENSADVYLKLEYMNPGSSVKDRIGLAMIEAAEKEGKLKAGNTI-IEPTSGNTGIGLAMVAAAKGLKAILVMPDTMSMERRNLLRAYGAELVLTPGAEGMKGAIKKAEE-LAEKHGYFVPQQFNNPSNPEIHRQTTGKEIVEQFGDDQLDAFVAGIGTGGTITGAGEVLKEAYPSIKIYAVEPSDSPVLSG 213          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: SRPG_SYNE7 (Cysteine synthase, plasmid OS=Synechococcus elongatus (strain PCC 7942) GN=srpG PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.774e-51
Identity = 112/215 (52.09%), Postives = 144/215 (66.98%), Query Frame = 1
Query:   46 SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKE-KNPNIKLYGIEPTESPVLS 684
            S     D ++ IG TPLV LN IV G  A + AK+E   P  SVK RIG +MI DAE +GL+ PG+  LIEPTSGNTGI LAF+AAA+   L +TMP +MSLERR +L A+GA+LVLT+  KGM GAV++AE+I A  P+ Y +LQQF NPANP IH +TTGPE+W+ +GG ID LVS            +++K+ +   I    +EP  SPV+S
Sbjct:    4 SGTFFADNSQTIGKTPLVRLNRIVKGAPATVLAKIEGRNPAYSVKCRIGAAMIWDAEQRGLLGPGKE-LIEPTSGNTGIALAFVAAARGIPLTLTMPETMSLERRKLLAAYGAKLVLTEGVKGMTGAVRRAEDIAASDPDRYVLLQQFRNPANPAIHEQTTGPEIWEDTGGAIDILVSGVGTGGTITGVSRYIKQTQGKPILSVAVEPEASPVIS 217          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_NEIMB (Cysteine synthase OS=Neisseria meningitidis serogroup B GN=cysK PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.774e-51
Identity = 104/212 (49.06%), Postives = 141/212 (66.51%), Query Frame = 1
Query:   55 IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAY-MLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            IA  +TELIGNTPLV LN +  G  A +A KLE   P SSVKDRI  +MI  AE  G I    +V++E TSGNTG+GLA + AA+ Y+L ITMP SMS ER+++LRAFGAEL+LT  A+GM GA+ KA+ ++   P+ Y M +QF+N ANP++H +TT  E+W+ + G++D  V+            + LK+  P +K+  +EP  SPVLSG
Sbjct:    3 IANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVKDRIAEAMIEGAEKAGKINKN-TVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKERKMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTYFMPRQFDNEANPEVHRKTTAEEIWRDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSG 213          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_FLAS3 (Cysteine synthase OS=Flavobacterium sp. (strain K3-15 / DSM ID92-509) GN=cysK PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.377e-50
Identity = 107/209 (51.20%), Postives = 141/209 (67.46%), Query Frame = 1
Query:   61 KDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            ++  E IGNTP+V +NN+ N     I  KLE   P  S+KDRI  +MI DAEAKGL+   +S +IEPTSGNTGIGLA +AA K Y+LI+ MP SMS+ERR I+ A+GAE VLT   KGMKGA++KA E+  +TPN+++ +QF+NPAN KIH ETT  E+ +     +D +++            K LKEK PN+K+  +EP  SPVLSG
Sbjct:    4 QNALETIGNTPVVKINNLFNSD-HEIWIKLEKSNPGGSIKDRIALAMIEDAEAKGLLNK-DSTIIEPTSGNTGIGLALVAAVKGYKLILVMPESMSIERRKIMEAYGAEFVLTPREKGMKGAIEKANELAEETPNSWIPRQFDNPANVKIHVETTAQEILQDFPEGLDYVITGVGTGGHITGIAKALKEKYPNLKVIAVEPELSPVLSG 210          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_STAES (Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=cysK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.165e-49
Identity = 109/208 (52.40%), Postives = 143/208 (68.75%), Query Frame = 1
Query:   67 VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGR-IDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            VT++IGNTP+V L N+V+   A I  KLE   P  SVKDRI  +MI  AE +G I PG+++ +EPTSGNTGIGLAF+ AAK Y+ + TMP +MS ERR +L+A+GAELVLT  ++ MKGA++KA+E L +    +  QQFENPANP+IH  TTGPEL +   GR IDA ++            K LK++ PN+++  IEP  SPVLSG
Sbjct:    9 VTQIIGNTPVVKLRNVVDDDAADIYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKE-LKEEHGYFEPQQFENPANPEIHELTTGPELVEQFEGRQIDAFLAGVGTGGTLSGVGKVLKKEYPNVEIVAIEPEASPVLSG 214          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_STAEQ (Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=cysK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.165e-49
Identity = 109/208 (52.40%), Postives = 143/208 (68.75%), Query Frame = 1
Query:   67 VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGR-IDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            VT++IGNTP+V L N+V+   A I  KLE   P  SVKDRI  +MI  AE +G I PG+++ +EPTSGNTGIGLAF+ AAK Y+ + TMP +MS ERR +L+A+GAELVLT  ++ MKGA++KA+E L +    +  QQFENPANP+IH  TTGPEL +   GR IDA ++            K LK++ PN+++  IEP  SPVLSG
Sbjct:    9 VTQIIGNTPVVKLRNVVDDDAADIYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKE-LKEEHGYFEPQQFENPANPEIHELTTGPELVEQFEGRQIDAFLAGVGTGGTLSGVGKVLKKEYPNVEIVAIEPEASPVLSG 214          
The following BLAST results are available for this feature:
BLAST of CV884518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CYSK_SALTY7.300e-5251.16Cysteine synthase A OS=Salmonella typhimurium GN=c... [more]
CYSK_SALTI7.300e-5251.16Cysteine synthase A OS=Salmonella typhi GN=cysK PE... [more]
CYSK_ECOLI1.245e-5151.16Cysteine synthase A OS=Escherichia coli (strain K1... [more]
CYSK_ECO571.245e-5151.16Cysteine synthase A OS=Escherichia coli O157:H7 GN... [more]
CYSK_BACSU2.124e-5152.36Cysteine synthase OS=Bacillus subtilis GN=cysK PE=... [more]
SRPG_SYNE72.774e-5152.09Cysteine synthase, plasmid OS=Synechococcus elonga... [more]
CYSK_NEIMB2.774e-5149.06Cysteine synthase OS=Neisseria meningitidis serogr... [more]
CYSK_FLAS31.377e-5051.20Cysteine synthase OS=Flavobacterium sp. (strain K3... [more]
CYSK_STAES1.165e-4952.40Cysteine synthase OS=Staphylococcus epidermidis (s... [more]
CYSK_STAEQ1.165e-4952.40Cysteine synthase OS=Staphylococcus epidermidis (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A02_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884518 ID=CV884518; Name=CV884518; organism=Citrus sinensis; type=EST; length=689bp
CCACCTTCTACACAAGTCAAGTAATCATAAAACATGGCGGTTGAGAGTAG
CAACATTGCAAAAGATGTTACAGAATTAATTGGCAATACACCATTGGTGT
ATCTCAACAATATTGTCAATGGGTGTGTTGCCCGCATTGCTGCTAAGCTA
GAGATGATGGAACCGTGCTCTAGTGTCAAGGACAGGATTGGTTATAGCAT
GATTTCTGATGCGGAGGCGAAGGGTCTAATAACACCAGGGGAGAGTGTAC
TCATTGAACCTACAAGTGGAAATACTGGGATTGGTTTGGCGTTCATGGCG
GCAGCCAAGCAATACAGGCTTATCATTACAATGCCAGCTTCAATGAGTCT
TGAAAGAAGAATCATTCTTCGAGCATTTGGAGCTGAATTAGTTCTCACCG
ATCCTGCTAAGGGGATGAAAGGGGCTGTTCAGAAGGCAGAGGAGATTCTG
GCTAAAACCCCCAATGCTTACATGCTGCAGCAATTTGAAAACCCTGCCAA
TCCAAAGATCCATTATGAAACTACTGGACCAGAGTTATGGAAAGGGTCAG
GAGGGAGAATCGATGCCCTTGTTTCCGGAATTGGTACTGGTGGCACAATA
ACAGGTGCAGGAAAATTTCTCAAAGAGAAGAACCCCAACATAAAGCTCTA
TGGTATAGAGCCAACTGAAAGTCCTGTTCTATCTGGAGG
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