CV884518

Overview
NameCV884518
Unique NameCV884518
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSM_AQUAE (Cysteine synthase OS=Aquifex aeolicus GN=cysM PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.806e-34
Identity = 86/203 (42.36%), Postives = 121/203 (59.61%), Query Frame = 1
Query:   67 VTELIGNTPLVYLNNIVNGCV---ARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYM-LQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEP 663
            + +L+GNTPLV +   +   +     I AKLE   P  SVKDR   SM  DA  +GLI  G+ V+I+ TSGNTGI LA + AA    + + MPA++S ER+ I++AFGA+L LTDP +G  GA+    E++ K P  Y+ L Q+ NPAN K H+ +TG E+W  + GRI   V+            + LK  NPNI++ G++P
Sbjct:   25 ILKLVGNTPLVRVKKCLPEDIPEDVEIWAKLESFNPGGSVKDRPALSMFLDALKRGLIKEGK-VVIDATSGNTGIALAMVGAALGVPVELAMPANVSEERKKIIKAFGAKLYLTDPLEGTDGAILFVRELVQKYPEKYVYLDQYNNPANWKAHFYSTGIEIWNQTKGRITHFVAGIGTGGTIMGTGRRLKIYNPNIQVIGVQP 226          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CBS_MACFA (Cystathionine beta-synthase OS=Macaca fascicularis GN=CBS PE=2 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 2.359e-34
Identity = 85/215 (39.53%), Postives = 120/215 (55.81%), Query Frame = 1
Query:   43 ESSNIAKDVTELIGNTPLVYLNNIVN--GCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP---AKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTES 672
            +S  I  D+ + IG+TP++ +N I    G    + AK E      SVKDRI   MI DAE  G + PG+++ IEPTSGNTGIGLA  AA + YR II MP  MS E+  +LRA GAE+V T         +  V  A  +  + PN+++L Q+ N +NP  HY+TT  E+ +   G++D LV+            + LKEK P  ++ G++P  S
Sbjct:   72 KSPKILPDILKKIGDTPMIRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERAGTLKPGDTI-IEPTSGNTGIGLALTAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILRQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGS 285          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CBS_HUMAN (Cystathionine beta-synthase OS=Homo sapiens GN=CBS PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.359e-34
Identity = 86/215 (40.00%), Postives = 120/215 (55.81%), Query Frame = 1
Query:   43 ESSNIAKDVTELIGNTPLVYLNNIVN--GCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDP---AKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTES 672
            +S  I  D+ + IG+TP+V +N I    G    + AK E      SVKDRI   MI DAE  G + PG+++ IEPTSGNTGIGLA  AA + YR II MP  MS E+  +LRA GAE+V T         +  V  A  +  + PN+++L Q+ N +NP  HY+TT  E+ +   G++D LV+            + LKEK P  ++ G++P  S
Sbjct:   72 KSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGS 285          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CBS_YEAST (Cystathionine beta-synthase OS=Saccharomyces cerevisiae GN=CYS4 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.171e-33
Identity = 84/210 (40.00%), Postives = 120/210 (57.14%), Query Frame = 1
Query:   64 DVTELIGNTPLVYLNNIVN--GCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM---KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWK-----GSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEP 663
            +V +L+GNTPL+ L  +    G   +I AKLE+  P  S+KDRI  SM+ +AEA G I P  S LIEPTSGNTGIGLA + A K YR IIT+P  MS E+  +L+A GAE++ T  A      +  +  A+++  + P A +L Q+ N  NP+ HY  TG E+ +          + A+V+            K+LKE+N  I++ G +P
Sbjct:   13 NVIDLVGNTPLIALKKLPKALGIKPQIYAKLELYNPGGSIKDRIAKSMVEEAEASGRIHPSRSTLIEPTSGNTGIGLALIGAIKGYRTIITLPEKMSNEKVSVLKALGAEIIRTPTAAAWDSPESHIGVAKKLEKEIPGAVILDQYNNMMNPEAHYFGTGREIQRQLEDLNLFDNLRAVVAGAGTGGTISGISKYLKEQNDKIQIVGADP 222          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSM_PSESY (Cysteine synthase B (Fragment) OS=Pseudomonas syringae pv. syringae GN=cysM PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.096e-31
Identity = 75/163 (46.01%), Postives = 100/163 (61.35%), Query Frame = 1
Query:   67 VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGG 555
            + + +GNTPLV L  +       +  KLE   P  SVKDR   SMI+ AE +G I PG++ LIE TSGNTGI LA  AA K YR+I+ MP + S ER+  + A+GAEL+      GM+GA   AE + A+     +L QF N  NP+ HY +TGPE+W+ +GG
Sbjct:    8 IADCVGNTPLVRLQRMAGNTSNTLLLKLEGNNPAGSVKDRPALSMITRAELRGQIHPGDT-LIEATSGNTGIALAMAAAIKGYRMILIMPDNSSAERKAAMTAYGAELISVSKDDGMEGARDLAERMQAE-GRGKVLDQFANGDNPEAHYTSTGPEIWRQTGG 168          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSM_MYCTU (Cysteine synthase B OS=Mycobacterium tuberculosis GN=cysM PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.164e-31
Identity = 84/204 (41.18%), Postives = 110/204 (53.92%), Query Frame = 1
Query:   73 ELIGNTPLVYLNNIV-------NGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEP 663
            + +GNTPLV L  +        +G   R+ AKLE   P  S+KDR    MI  AEA GL+ PG ++L EPTSGNTGI LA  A  K YRLI  MP + S+ERR +L  +GA+++ +    G   AV  A+E+ A  P+  ML Q+ NPAN   HY  TGPEL       I   V+            +FL+E   N+K+   EP
Sbjct:    9 QALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPEL-LADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP 210          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSM_MYCBO (Cysteine synthase B OS=Mycobacterium bovis GN=cysM PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.164e-31
Identity = 84/204 (41.18%), Postives = 110/204 (53.92%), Query Frame = 1
Query:   73 ELIGNTPLVYLNNIV-------NGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEP 663
            + +GNTPLV L  +        +G   R+ AKLE   P  S+KDR    MI  AEA GL+ PG ++L EPTSGNTGI LA  A  K YRLI  MP + S+ERR +L  +GA+++ +    G   AV  A+E+ A  P+  ML Q+ NPAN   HY  TGPEL       I   V+            +FL+E   N+K+   EP
Sbjct:    9 QALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPEL-LADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP 210          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSM_HELPJ (Cysteine synthase OS=Helicobacter pylori J99 GN=cysM PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.212e-30
Identity = 72/184 (39.13%), Postives = 110/184 (59.78%), Query Frame = 1
Query:  136 IAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            I AKLE + P  SVKDR+G  +I +A     IT   + +IEPT+GNTGI LA +A     + I  +P   S E++ I+RA GA ++ T  ++G+ GA++K++E+    P++Y+  QFENP NP  +Y T  PE+ +  G  + + V+            K+LKE+ PNI+L G+EP E  +L+G
Sbjct:   31 IYAKLEHLNPGGSVKDRLGQYLIKEAFRTRKIT-STTTIIEPTAGNTGIALALVAIKHHLKTIFVVPKKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFENPDNPAAYYHTLAPEIVQELGTNLTSFVAGIGSGGTFAGMAKYLKERIPNIRLIGVEP-EGSILNG 212          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSM_HELPY (Cysteine synthase OS=Helicobacter pylori GN=cysM PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.067e-30
Identity = 76/213 (35.68%), Postives = 120/213 (56.34%), Query Frame = 1
Query:   55 IAKDVTELIGNTPLVYLNN--IVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            I   + + IG TP+    N        + I AKLE + P  SVKDR+G  +I +    G IT  ++ +IEPT+GNTGI LA +A     + I  +P   S E++ I+RA GA ++ T  ++G+ GA++K++E+    P++Y+  QFENP NP  +Y T  PE+ +  G  + + V+            ++LKE+ P I+L G+EP E  +L+G
Sbjct:    3 IITTMQDAIGRTPVFKFTNKDYPIPLNSAIYAKLEHLNPGGSVKDRLGQYLIGEGFKTGKIT-SKTTIIEPTAGNTGIALALVAIKHHLKTIFVVPEKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFENPDNPAAYYHTLAPEIVQELGTNLTSFVAGIGSGGTFAGTARYLKERIPAIRLIGVEP-EGSILNG 213          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_EMENI (Cysteine synthase OS=Emericella nidulans GN=cysB PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.481e-28
Identity = 73/178 (41.01%), Postives = 100/178 (56.18%), Query Frame = 1
Query:   43 ESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGM---KGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDA 567
            ++      +TE IGNTPL+ L  +     + I AK E   P  SVKDR    ++ DAE +GL+ PG +V +E T+GNTGIGLA +  +K Y+L+I MP + S  +  +LR  GAE V   PA      +    KA        NA    QF+N AN + H ETTGPE+W  +GG++DA
Sbjct:   28 QAQGFVNGLTEAIGNTPLIRLKRLSEETGSNILAKAEFQNPGGSVKDRAALYVVKDAEERGLLKPGGTV-VEGTAGNTGIGLAHVCRSKGYKLVIYMPNTQSQGKIDLLRLLGAE-VYPVPAVAFDNPENYNHKARRHAESLDNAVWTNQFDNTANRRAHIETTGPEIWAQTGGKLDA 203          
The following BLAST results are available for this feature:
BLAST of CV884518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CYSM_AQUAE1.806e-3442.36Cysteine synthase OS=Aquifex aeolicus GN=cysM PE=3... [more]
CBS_MACFA2.359e-3439.53Cystathionine beta-synthase OS=Macaca fascicularis... [more]
CBS_HUMAN2.359e-3440.00Cystathionine beta-synthase OS=Homo sapiens GN=CBS... [more]
CBS_YEAST1.171e-3340.00Cystathionine beta-synthase OS=Saccharomyces cerev... [more]
CYSM_PSESY1.096e-3146.01Cysteine synthase B (Fragment) OS=Pseudomonas syri... [more]
CYSM_MYCTU4.164e-3141.18Cysteine synthase B OS=Mycobacterium tuberculosis ... [more]
CYSM_MYCBO4.164e-3141.18Cysteine synthase B OS=Mycobacterium bovis GN=cysM... [more]
CYSM_HELPJ1.212e-3039.13Cysteine synthase OS=Helicobacter pylori J99 GN=cy... [more]
CYSM_HELPY2.067e-3035.68Cysteine synthase OS=Helicobacter pylori GN=cysM P... [more]
CYSK_EMENI1.481e-2841.01Cysteine synthase OS=Emericella nidulans GN=cysB P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A02_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884518 ID=CV884518; Name=CV884518; organism=Citrus sinensis; type=EST; length=689bp
CCACCTTCTACACAAGTCAAGTAATCATAAAACATGGCGGTTGAGAGTAG
CAACATTGCAAAAGATGTTACAGAATTAATTGGCAATACACCATTGGTGT
ATCTCAACAATATTGTCAATGGGTGTGTTGCCCGCATTGCTGCTAAGCTA
GAGATGATGGAACCGTGCTCTAGTGTCAAGGACAGGATTGGTTATAGCAT
GATTTCTGATGCGGAGGCGAAGGGTCTAATAACACCAGGGGAGAGTGTAC
TCATTGAACCTACAAGTGGAAATACTGGGATTGGTTTGGCGTTCATGGCG
GCAGCCAAGCAATACAGGCTTATCATTACAATGCCAGCTTCAATGAGTCT
TGAAAGAAGAATCATTCTTCGAGCATTTGGAGCTGAATTAGTTCTCACCG
ATCCTGCTAAGGGGATGAAAGGGGCTGTTCAGAAGGCAGAGGAGATTCTG
GCTAAAACCCCCAATGCTTACATGCTGCAGCAATTTGAAAACCCTGCCAA
TCCAAAGATCCATTATGAAACTACTGGACCAGAGTTATGGAAAGGGTCAG
GAGGGAGAATCGATGCCCTTGTTTCCGGAATTGGTACTGGTGGCACAATA
ACAGGTGCAGGAAAATTTCTCAAAGAGAAGAACCCCAACATAAAGCTCTA
TGGTATAGAGCCAACTGAAAGTCCTGTTCTATCTGGAGG
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