CV884518

Overview
NameCV884518
Unique NameCV884518
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK1_SCHPO (Cysteine synthase 1 OS=Schizosaccharomyces pombe GN=cys11 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.526e-28
Identity = 74/187 (39.57%), Postives = 99/187 (52.94%), Query Frame = 1
Query:   79 IGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL--VLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKN 633
            IG TPL+ LN + N     I AK E   P  SVKDR  Y ++ DAE KG ++ G ++ +E T+GNTGIGLA +A A+ Y+ +I MP + S  +   L+  GAE+  V   P         +A      TPNA    QF+N AN   HYETTGPE+W  + G +D                K+LKEK+
Sbjct:   21 IGRTPLIRLNTLSNETGCNILAKAEFQNPGGSVKDRAAYYVVRDAEKKGKLSRGGTI-VEGTAGNTGIGLAHIARARGYKCVIYMPNTQSQAKIDTLKFLGAEVHPVPVAPFSNPLNYNHQARRHAESTPNASWTDQFDNVANLLSHYETTGPEIWDQTKGTVDGFTCSTGTGGTFAGVTKYLKEKS 206          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_YEAST (Putative cysteine synthase OS=Saccharomyces cerevisiae GN=YGR012W PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.127e-27
Identity = 77/197 (39.09%), Postives = 105/197 (53.30%), Query Frame = 1
Query:   67 VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGE-SVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMK-----GAVQKAEEILAKTPN---AYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEK 630
            V ELIGNTPLV + ++       I AKLE+  P  S KDR+  ++I  AE  G +  GE   + E TSG+TGI +A +  A  YR  I++P   SLE+  +L + GA +    PA  +       A +KA   L K+ N   A    QFEN AN K+HY+TTGPE+   + G IDA ++            KFLKE+
Sbjct:   49 VEELIGNTPLVKIRSLTKATGVNIYAKLELCNPAGSAKDRVALNIIKTAEELGELVRGEPGWVFEGTSGSTGISIAVVCNALGYRAHISLPDDTSLEKLALLESLGATVNKVKPASIVDPNQYVNAAKKACNELKKSGNGIRAVFADQFENEANWKVHYQTTGPEIAHQTKGNIDAFIAGCGTGGTITGVAKFLKER 245          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_DICDI (Cysteine synthase OS=Dictyostelium discoideum GN=cysK PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.824e-25
Identity = 70/219 (31.96%), Postives = 111/219 (50.68%), Query Frame = 1
Query:   37 AVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGA---VQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLS 684
            +V  S I+  + E +GNTPL+ + ++       I  K E M P  S KDR+   +I D E KGL+  G S ++E T+G+TGI L  +  ++ Y + + +P ++S E+  +L   GAE  +  P  GM  A   +  A +       A+   QF+N +N   HY  T  E+W+ + G +D  V+             +LKE NPNI+ + I+P  S + S
Sbjct:   32 SVFHSGISNGIIETVGNTPLIRIKSLSEATGCEIYGKAEFMNPGGSPKDRVAREIILDGEKKGLLKKG-STIVEATAGSTGISLTMLGKSRGYNVQLFIPDNVSKEKVDLLEMLGAETKIV-PIVGMNNANHFMHCAYQRCLGDDMAFYANQFDNLSNFNAHYNGTAKEIWEQTKGDVDGFVAAAGTGGTVAGISSYLKEVNPNIQNWLIDPPGSGLYS 248          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK2_SCHPO (Cysteine synthase 2 OS=Schizosaccharomyces pombe GN=cys12 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23
Identity = 72/220 (32.73%), Postives = 109/220 (49.55%), Query Frame = 1
Query:   52 NIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGES-VLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELV------LTDPAKGMKGAVQKA------EEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTES 672
            +I   V  LIGNT +V + ++       I AK E + P +S KDR+   MI  AE  G + P +S  + E T+G+TGI +A +  +  Y   I MP+  S E+  IL   GA +       + DP   +  A + A      E I  K    Y   QFENPAN + H+ +TGPE+W+   G++DA ++            ++LK K+P+I +   +P  S
Sbjct:   41 DIVNGVEGLIGNTKMVRIKSLSQATGCDILAKAEFLNPGNSPKDRVALQMIRTAEENGDLVPYQSNAVYEGTAGSTGISIAMLCCSLGYDSRIYMPSDQSKEKSDILELLGAHVQRVTPAPIVDPNHFVNTARRNAANHTVDESIPGK---GYFANQFENPANWQAHFNSTGPEIWRQCAGKLDAFIAGSGTGGTIAGISRYLKSKDPSITVCLADPPGS 257          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: Y4XP_RHISN (Putative cysteine synthase OS=Rhizobium sp. (strain NGR234) GN=NGR_a00730 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.218e-16
Identity = 68/209 (32.54%), Postives = 103/209 (49.28%), Query Frame = 1
Query:   67 VTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAEL--VLTDPAKGMKGAVQK---AEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPV 678
            VT+LIG TP++ ++  V G  A +  K+E   P  S+KDR+  SM+  A   G + PG ++ +E +SGNTG GLA  A     R I  +    + ++  ++RA GAE+  V  D  +     V++   A ++ A+ P A  + Q +NPANP+  Y     EL       IDA V             + LK  NP ++   +EP  S V
Sbjct:    6 VTQLIGQTPVMSID--VPGRNATLVLKIEKNNPGGSMKDRMARSMVIAALQDGRLPPGGTI-VESSSGNTGTGLALAALEFGLRFIAVVDHHAAPDKIRMMRALGAEIRYVEGDFREDEVAVVERQRLAAQLGAQLPGALFMNQSDNPANPE-GYTGLVDELVAQLPDGIDAFVGCVGTGGSMTGISQRLKRNNPAVRTIAVEPAGSIV 210          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSM_RALME (Cysteine synthase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=cysM PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.218e-16
Identity = 59/210 (28.10%), Postives = 98/210 (46.67%), Query Frame = 1
Query:   55 IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGA--ELVLTDPAKG--MKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTES 672
            +   + E IGNTPLV L  +     A + AKLE++ P  SVKDR    ++     +G I P  S +IE +SGN  I LA +   K  R    +   +S     ILR +GA  E V    ++G  ++  +++  ++L +  +A  + Q+ NP N + HY     E+        D LV             + L++  P++++ G++   S
Sbjct:    2 VCNSIIESIGNTPLVQLRRLFGRADAEVFAKLELLNPAGSVKDRPARYIVEKGLTEGAIGP-HSHVIESSSGNLAIALAMICGLKGLRFTAVVDPKISPTNLKILRCYGAGIEQVTAKDSQGGYLETRIERVRQMLREQRDAIWINQYANPLNWESHYYGEAAEILAQLAQPADVLVLGVSTSGTVHGIARRLRKAWPSMRVVGVDAVGS 210          
The following BLAST results are available for this feature:
BLAST of CV884518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CYSK1_SCHPO2.526e-2839.57Cysteine synthase 1 OS=Schizosaccharomyces pombe G... [more]
CYSK_YEAST8.127e-2739.09Putative cysteine synthase OS=Saccharomyces cerevi... [more]
CYSK_DICDI5.824e-2531.96Cysteine synthase OS=Dictyostelium discoideum GN=c... [more]
CYSK2_SCHPO1.098e-2332.73Cysteine synthase 2 OS=Schizosaccharomyces pombe G... [more]
Y4XP_RHISN2.218e-1632.54Putative cysteine synthase OS=Rhizobium sp. (strai... [more]
CYSM_RALME2.218e-1628.10Cysteine synthase OS=Ralstonia metallidurans (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A02_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884518 ID=CV884518; Name=CV884518; organism=Citrus sinensis; type=EST; length=689bp
CCACCTTCTACACAAGTCAAGTAATCATAAAACATGGCGGTTGAGAGTAG
CAACATTGCAAAAGATGTTACAGAATTAATTGGCAATACACCATTGGTGT
ATCTCAACAATATTGTCAATGGGTGTGTTGCCCGCATTGCTGCTAAGCTA
GAGATGATGGAACCGTGCTCTAGTGTCAAGGACAGGATTGGTTATAGCAT
GATTTCTGATGCGGAGGCGAAGGGTCTAATAACACCAGGGGAGAGTGTAC
TCATTGAACCTACAAGTGGAAATACTGGGATTGGTTTGGCGTTCATGGCG
GCAGCCAAGCAATACAGGCTTATCATTACAATGCCAGCTTCAATGAGTCT
TGAAAGAAGAATCATTCTTCGAGCATTTGGAGCTGAATTAGTTCTCACCG
ATCCTGCTAAGGGGATGAAAGGGGCTGTTCAGAAGGCAGAGGAGATTCTG
GCTAAAACCCCCAATGCTTACATGCTGCAGCAATTTGAAAACCCTGCCAA
TCCAAAGATCCATTATGAAACTACTGGACCAGAGTTATGGAAAGGGTCAG
GAGGGAGAATCGATGCCCTTGTTTCCGGAATTGGTACTGGTGGCACAATA
ACAGGTGCAGGAAAATTTCTCAAAGAGAAGAACCCCAACATAAAGCTCTA
TGGTATAGAGCCAACTGAAAGTCCTGTTCTATCTGGAGG
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