EY665287

Overview
NameEY665287
Unique NameEY665287
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1136
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: ABDH_SHIFL (Gamma-aminobutyraldehyde dehydrogenase OS=Shigella flexneri GN=ydcW PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.773e-18
Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 3 
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LHMELGGKNACTVLEDADLDLVAANI 470
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I   HMELGGK    V +DAD++ V   +
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGV 268
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: ABDH_SHIF8 (Gamma-aminobutyraldehyde dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=ydcW PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.773e-18
Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 3 
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LHMELGGKNACTVLEDADLDLVAANI 470
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I   HMELGGK    V +DAD++ V   +
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGV 268
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: ABDH_ECOSE (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain SE11) GN=ydcW PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.773e-18
Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 3 
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LHMELGGKNACTVLEDADLDLVAANI 470
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I   HMELGGK    V +DAD++ V   +
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGV 268
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: ABDH_ECOLI (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=ydcW PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.773e-18
Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 3 
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LHMELGGKNACTVLEDADLDLVAANI 470
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I   HMELGGK    V +DAD++ V   +
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGV 268
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: ABDH_ECOLC (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=ydcW PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.773e-18
Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 3 
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LHMELGGKNACTVLEDADLDLVAANI 470
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I   HMELGGK    V +DAD++ V   +
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGV 268
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: ABDH_ECOHS (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=ydcW PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.773e-18
Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 3 
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LHMELGGKNACTVLEDADLDLVAANI 470
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I   HMELGGK    V +DAD++ V   +
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGV 268
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: ABDH_ECODH (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=ydcW PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.773e-18
Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 3 
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LHMELGGKNACTVLEDADLDLVAANI 470
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I   HMELGGK    V +DAD++ V   +
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGV 268
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: ABDH_ECOBW (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12 / BW2952) GN=ydcW PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.773e-18
Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 3 
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LHMELGGKNACTVLEDADLDLVAANI 470
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I   HMELGGK    V +DAD++ V   +
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGV 268
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: ABDH_ECO8A (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=ydcW PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.773e-18
Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 3 
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LHMELGGKNACTVLEDADLDLVAANI 470
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I   HMELGGK    V +DAD++ V   +
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGV 268
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: ABDH_ECO55 (Gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=ydcW PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.773e-18
Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 3 
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGIS-ISKKAGMIP-LHMELGGKNACTVLEDADLDLVAANI 470
            PLGVV +I P+NYP+ +A  K+APAL AGN +VLKP     + AL +        FP G+I+ + G+G  +GD LT HP V  +S TG   TG   IS  A  I   HMELGGK    V +DAD++ V   +
Sbjct:  138 PLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGV 268
The following BLAST results are available for this feature:
BLAST of EY665287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 475
Match NameE-valueIdentityDescription
ABDH_SHIFL1.773e-1844.70Gamma-aminobutyraldehyde dehydrogenase OS=Shigella... [more]
ABDH_SHIF81.773e-1844.70Gamma-aminobutyraldehyde dehydrogenase OS=Shigella... [more]
ABDH_ECOSE1.773e-1844.70Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOLI1.773e-1844.70Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOLC1.773e-1844.70Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOHS1.773e-1844.70Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECODH1.773e-1844.70Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECOBW1.773e-1844.70Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO8A1.773e-1844.70Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]
ABDH_ECO551.773e-1844.70Gamma-aminobutyraldehyde dehydrogenase OS=Escheric... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665287 ID=EY665287; Name=EY665287; organism=Citrus sinensis; type=EST; length=1136bp
AATTCTCGGAGAAGGGAANGTTTTTGGTGTCCCATATCTTCCCCGGAAAT
GAGAGGACTAAGTATTGTCTCACTTCAAAGATTCCACTTGGTGTGGTTTT
GGCCATTCCACCGTTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTG
CTCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAG
GGTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTT
TCCTAAAGGCCTTATAAGCTGTGTCACCGGGAAAGGTTCTGAGATTGGTG
ATTTCCTTACTATGCATCCTGCAGTGAACTGTATAAGCTTCACTGGTGGA
GACACTGGAATTTCAATCTCGAAGAAAGCTGGTATGATCCCTCTTCATAT
GGAGTTGGGAGGCAAAAATGCTTGTACCGTGCTTGAGGATGCTGACCTTG
ATTTGGTTGCCGCAAACATAATAAAAGGATGAATTTCTTACAGTGGTAAA
AATGCACTGCATTAAAGTGTCTTGGTGAAGAATCTGTACAAATTCCCTGT
CAAAAAGGTAAAGTTAATTGGAAAACTAAAATTGGCCCTCCTAAAAAAAC
TGGTAATCCATCAATTGTGTCAATTTTTGCAATTTCTTGAAGGGTGGTAG
GAAGCCAAACAAAGAAAAACATCTTAAAAAACAAGAAAAAGAACCTCACA
GGCCTTTTCTTAGAAGTGAAAAAAAATAAAACAAGGAGAAAAATTTAAAC
ATTTACCTGAATAATATGATATTTAAGAGATACACAGATAGCACACATTG
AACTAGTATTTATTCAAAGAAATTAAATATGTACAGATATAAAGAAAACT
ACCAAAAGTTCCCCCCTTGATAAAATTTTCTTTAGTGTGTACATACTATG
AATAAAGCAAAAAAACTATTCTAACTTAGACTAGAAAATCAATGCCAATA
CGGTAAAATAATGATTTGACATAGAATGATATTTAATAGAAAATTAGAAA
TAATATCAATAAGTGATATAAATTAAACCTTGATGAATGAAACGAGGAGA
GGACTAATGATGAAATACAAAAAATAATAAACAAAAAGAATAAAAAACCA
TCAAGAACTANCTAATACAATGCCGAACAACACGCA
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