EY665287

Overview
NameEY665287
Unique NameEY665287
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1136
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: ASTD_VIBC3 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=astD PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.108e-11
Identity = 51/157 (32.48%), Postives = 76/157 (48.41%), Query Frame = 3
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG-GDTGISISKKAGMIP---LHMELGGKNACTVLED-ADLDLVAANIIKG*ISYSGKNALH*SVLVKNLY 539
            PLGV+    P+N+P +L    I PAL+AGN++V KP  Q       ++  +  AG P G+I+ V G   E G  L     ++ + FTG  +TG  + ++    P   L +E+GG N   + E   DLD     II+     SG+        V+ LY
Sbjct:  134 PLGVMAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSEQTPWTGEVLMQLWQQAGLPAGVINLVQG-SKETGIALAQSRGIDGLLFTGSANTGHLLHRQFAGQPDKMLALEMGGNNPMVISEHYGDLDATVYTIIQSAFISSGQRC----TCVRRLY 285          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: ASTD_SHEON (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella oneidensis GN=astD PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.108e-11
Identity = 47/143 (32.87%), Postives = 73/143 (51.05%), Query Frame = 3
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIP---LHMELGGKNACTVLEDADLDLVAANIIKG*ISYSGK 500
            P GVV    P+N+P +L    I PAL+AGNS+V KP       A  MV  +  +G P G+++ V G+  + G  L  HP ++ + FTG   TG  + ++    P   L +E+GG N   +   AD+     +I++     SG+
Sbjct:  134 PHGVVAVFGPYNFPGHLPNGHIVPALLAGNSVVFKPSELTPKVAELMVTLWEKSGLPAGVLNLVQGE-VDTGKALASHPQLDGLFFTGSSRTGHLLHQQYAGHPGKILALEMGGNNPLIIKGVADIKAAVHDILQSAYISSGQ 275          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: YOSF_SCHPO (Putative aldehyde dehydrogenase-like protein C21C3 OS=Schizosaccharomyces pombe GN=SPBC21C3.15c PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.978e-11
Identity = 45/149 (30.20%), Postives = 77/149 (51.68%), Query Frame = 3
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAA---LHMVH-CFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD---TGISISKKAGMIPLHMELGGKNACTVLEDADLDLVAANIIKG*ISYSGKNAL 509
            PLGV+ A+  +NYP++ A+  I  AL AGN++V+K     A +      MV       G    L+ C+T    ++ D LT H  +  I+F G       ++ S    + PL +ELGGK+ C + +D  L+ + + +++G    +G+N +
Sbjct:  127 PLGVIAALVSWNYPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYCEMVRSLLQSMGHSPELVQCITCL-PDVADHLTSHSGIKHITFIGSQPIAKLVAASAAKQLTPLCLELGGKDPCILTDDHRLEEILSIVMRGVFQSAGQNCI 274          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: ASTD_VIBCM (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=astD PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.978e-11
Identity = 48/144 (33.33%), Postives = 72/144 (50.00%), Query Frame = 3
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG-GDTGISISKKAGMIP---LHMELGGKNACTVLED-ADLDLVAANIIKG*ISYSGK 500
            PLGV+    P+N+P +L    I PAL+AGN++V KP  Q       ++  +  AG P G+I+ V G   E G  L     ++ + FTG  +TG  + ++    P   L +E+GG N   + E   DLD     II+     SG+
Sbjct:  134 PLGVMAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSEQTPWTGEVLMQLWQQAGLPAGVINLVQG-SKETGIALAQSRGIDGLLFTGSANTGHLLHRQFAGQPDKMLALEMGGNNPMVISEHYGDLDATVYTIIQSAFISSGQ 276          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: ASTD_SHEPW (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=astD PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.978e-11
Identity = 48/143 (33.57%), Postives = 71/143 (49.65%), Query Frame = 3
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIP---LHMELGGKNACTVLEDADLDLVAANIIKG*ISYSGK 500
            P GVV    P+N+P +L    I PAL+AGN++V KP       A  M+  +  AG P G+I+ V G+  E G  L  HP ++ + FTG   TG  + ++    P   L +E+GG N   +    D      +II+     SG+
Sbjct:  134 PHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPKVAELMLKLWEKAGLPAGVINLVQGE-VETGKALASHPQIDGLFFTGSSRTGHILHQQYAGDPGKILALEMGGNNPLIIKGVEDTKAAVHDIIQSAYISSGQ 275          
The following BLAST results are available for this feature:
BLAST of EY665287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 475
Match NameE-valueIdentityDescription
ASTD_VIBC36.108e-1132.48N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_SHEON6.108e-1132.87N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
YOSF_SCHPO7.978e-1130.20Putative aldehyde dehydrogenase-like protein C21C3... [more]
ASTD_VIBCM7.978e-1133.33N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_SHEPW7.978e-1133.57N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665287 ID=EY665287; Name=EY665287; organism=Citrus sinensis; type=EST; length=1136bp
AATTCTCGGAGAAGGGAANGTTTTTGGTGTCCCATATCTTCCCCGGAAAT
GAGAGGACTAAGTATTGTCTCACTTCAAAGATTCCACTTGGTGTGGTTTT
GGCCATTCCACCGTTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTG
CTCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAG
GGTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTT
TCCTAAAGGCCTTATAAGCTGTGTCACCGGGAAAGGTTCTGAGATTGGTG
ATTTCCTTACTATGCATCCTGCAGTGAACTGTATAAGCTTCACTGGTGGA
GACACTGGAATTTCAATCTCGAAGAAAGCTGGTATGATCCCTCTTCATAT
GGAGTTGGGAGGCAAAAATGCTTGTACCGTGCTTGAGGATGCTGACCTTG
ATTTGGTTGCCGCAAACATAATAAAAGGATGAATTTCTTACAGTGGTAAA
AATGCACTGCATTAAAGTGTCTTGGTGAAGAATCTGTACAAATTCCCTGT
CAAAAAGGTAAAGTTAATTGGAAAACTAAAATTGGCCCTCCTAAAAAAAC
TGGTAATCCATCAATTGTGTCAATTTTTGCAATTTCTTGAAGGGTGGTAG
GAAGCCAAACAAAGAAAAACATCTTAAAAAACAAGAAAAAGAACCTCACA
GGCCTTTTCTTAGAAGTGAAAAAAAATAAAACAAGGAGAAAAATTTAAAC
ATTTACCTGAATAATATGATATTTAAGAGATACACAGATAGCACACATTG
AACTAGTATTTATTCAAAGAAATTAAATATGTACAGATATAAAGAAAACT
ACCAAAAGTTCCCCCCTTGATAAAATTTTCTTTAGTGTGTACATACTATG
AATAAAGCAAAAAAACTATTCTAACTTAGACTAGAAAATCAATGCCAATA
CGGTAAAATAATGATTTGACATAGAATGATATTTAATAGAAAATTAGAAA
TAATATCAATAAGTGATATAAATTAAACCTTGATGAATGAAACGAGGAGA
GGACTAATGATGAAATACAAAAAATAATAAACAAAAAGAATAAAAAACCA
TCAAGAACTANCTAATACAATGCCGAACAACACGCA
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