EY665287

Overview
NameEY665287
Unique NameEY665287
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1136
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_PSEP1 (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=betB PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.312e-21
Identity = 52/139 (37.41%), Postives = 82/139 (58.99%), Query Frame = 3
Query:   57 TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLHMELGGKNACTVLEDADLDLVA 461
            + +  T + PLGV + I  +NYP+ +A+ K APAL AGN+++ KP    ++  L +   +  AG P G+ + +TG G E+G +LT HP +  +SFTGG T     ++ +  + +  + MELGGK+   +  DADLD  A
Sbjct:  133 SSFVYTRREPLGVTVGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLKLAEIYTEAGLPNGVFNVLTGSGREVGTWLTEHPRIEKVSFTGGTTTGKKVMASASSSSLKEVTMELGGKSPLIICADADLDKAA 271          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_KLEP3 (Betaine aldehyde dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=betB PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.312e-21
Identity = 55/139 (39.57%), Postives = 82/139 (58.99%), Query Frame = 3
Query:   57 TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLHMELGGKNACTVLEDADLDLVA 461
            + +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  ISFTGG       ++ S  + +  + MELGGK+   + +DADLDL A
Sbjct:  133 SSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGIGAETGQYLTEHPGIAKISFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIIADDADLDLAA 271          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_PSEPW (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain W619) GN=betB PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.713e-21
Identity = 52/139 (37.41%), Postives = 82/139 (58.99%), Query Frame = 3
Query:   57 TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLHMELGGKNACTVLEDADLDLVA 461
            + +  T + PLGV + I  +NYP+ +A+ K APAL AGN+++ KP    ++  L +   +  AG P G+ + +TG G E+G +LT HP +  +SFTGG T     ++ +  + +  + MELGGK+   +  DADLD  A
Sbjct:  133 SSFVYTRREPLGVTVGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLKLAEIYTEAGLPDGVFNVLTGSGREVGTWLTEHPRIEKVSFTGGTTTGKKVMASASSSSLKEVTMELGGKSPLIICADADLDKAA 271          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_ERWCT (Betaine aldehyde dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=betB PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.713e-21
Identity = 54/139 (38.85%), Postives = 82/139 (58.99%), Query Frame = 3
Query:   57 TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG----GDTGISISKKAGMIPLHMELGGKNACTVLEDADLDLVA 461
            T +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP    ++ AL +   +  AG P G+ + +TG G  +G  LT HP +  +SFTG    G T ++ +  + +  + MELGGK+   + +DADLD  A
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALKLAEIYTEAGLPAGVFNVLTGTGKSVGQALTTHPGIAKVSFTGGIASGKTVMANAAGSTLKDVTMELGGKSPLIIFDDADLDKAA 271          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: AL1A3_MOUSE (Aldehyde dehydrogenase family 1 member A3 OS=Mus musculus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.713e-21
Identity = 54/134 (40.30%), Postives = 79/134 (58.96%), Query Frame = 3
Query:   66 CLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTG----GDTGISISKKAGMIPLHMELGGKNACTVLEDADLDL 455
            C T   P+GV  AI P+N+P+ +   K+APAL  GN++VLKP  Q  + AL++       GFP G+++ V G G  +G  ++ HP +N I+FTG    G      + ++ +  + +ELGGKN C V  DADLDL
Sbjct:  164 CFTRHEPIGVCGAITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTALYLASLIKEVGFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVREAASRSNLKRVTLELGGKNPCIVCADADLDL 297          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: LADH_METVS (Lactaldehyde dehydrogenase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0796 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.923e-21
Identity = 55/148 (37.16%), Postives = 86/148 (58.11%), Query Frame = 3
Query:   72 TSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMV----HCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLHMELGGKNACTVLEDADLDLVAANIIKG*ISYSGK 500
            T K P+GVV AI PFN+P+NL   KI PA+  GN++VL P ++  + A+++     H        +G+ +  TG G  +GD +  +  +N +SFTG  + G  ISK + M  + +ELGG N   VL+D+D++L A + +K     SG+
Sbjct:  125 TKKEPVGVVGAITPFNFPLNLITHKIGPAIATGNAVVLHPSSKAPITAIYLTKVIEHVLKKMNIERGVFNLTTGNGEIVGDEIAKNEKINFLSFTGSVEVGELISKSSYMKKVALELGGNNPLIVLKDSDIELAAKSAVKSKFLNSGQ 272          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_XANCP (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris GN=betB PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.923e-21
Identity = 59/130 (45.38%), Postives = 76/130 (58.46%), Query Frame = 3
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIPLH---MELGGKNACTVLEDADLDLVA 461
            PLGVV AI  +NYP+ +A+ K APAL AGN+++ KP     + AL +   F  AG P G+ + + G G+ +G  LT HP +  ISFTGG  TG  +   A    L    MELGGK+   V  DADLDL A
Sbjct:  142 PLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGHALTEHPEIEKISFTGGTATGRKVMASASSSSLKDVTMELGGKSPLIVCADADLDLAA 271          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_XANCB (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=betB PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.923e-21
Identity = 59/130 (45.38%), Postives = 76/130 (58.46%), Query Frame = 3
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIPLH---MELGGKNACTVLEDADLDLVA 461
            PLGVV AI  +NYP+ +A+ K APAL AGN+++ KP     + AL +   F  AG P G+ + + G G+ +G  LT HP +  ISFTGG  TG  +   A    L    MELGGK+   V  DADLDL A
Sbjct:  142 PLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGHALTEHPEIEKISFTGGTATGRKVMASASSSSLKDVTMELGGKSPLIVCADADLDLAA 271          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_XANC8 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=betB PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.923e-21
Identity = 59/130 (45.38%), Postives = 76/130 (58.46%), Query Frame = 3
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIPLH---MELGGKNACTVLEDADLDLVA 461
            PLGVV AI  +NYP+ +A+ K APAL AGN+++ KP     + AL +   F  AG P G+ + + G G+ +G  LT HP +  ISFTGG  TG  +   A    L    MELGGK+   V  DADLDL A
Sbjct:  142 PLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGHALTEHPEIEKISFTGGTATGRKVMASASSSSLKDVTMELGGKSPLIVCADADLDLAA 271          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_XANC5 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=betB PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.923e-21
Identity = 59/130 (45.38%), Postives = 76/130 (58.46%), Query Frame = 3
Query:   84 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMIPLH---MELGGKNACTVLEDADLDLVA 461
            PLGVV AI  +NYP+ +A+ K APAL AGN+++ KP     + AL +   F  AG P G+ + + G G+ +G  LT HP +  ISFTGG  TG  +   A    L    MELGGK+   V  DADLDL A
Sbjct:  142 PLGVVGAIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLTALKLAEIFTEAGLPDGVFNVLPGDGASVGTALTEHPQIEKISFTGGTATGRKVMASASSSSLKEVTMELGGKSPLIVCADADLDLAA 271          
The following BLAST results are available for this feature:
BLAST of EY665287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 475
Match NameE-valueIdentityDescription
BETB_PSEP11.312e-2137.41Betaine aldehyde dehydrogenase OS=Pseudomonas puti... [more]
BETB_KLEP31.312e-2139.57Betaine aldehyde dehydrogenase OS=Klebsiella pneum... [more]
BETB_PSEPW1.713e-2137.41Betaine aldehyde dehydrogenase OS=Pseudomonas puti... [more]
BETB_ERWCT1.713e-2138.85Betaine aldehyde dehydrogenase OS=Erwinia carotovo... [more]
AL1A3_MOUSE1.713e-2140.30Aldehyde dehydrogenase family 1 member A3 OS=Mus m... [more]
LADH_METVS2.923e-2137.16Lactaldehyde dehydrogenase OS=Methanococcus vannie... [more]
BETB_XANCP2.923e-2145.38Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANCB2.923e-2145.38Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANC82.923e-2145.38Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANC52.923e-2145.38Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665287 ID=EY665287; Name=EY665287; organism=Citrus sinensis; type=EST; length=1136bp
AATTCTCGGAGAAGGGAANGTTTTTGGTGTCCCATATCTTCCCCGGAAAT
GAGAGGACTAAGTATTGTCTCACTTCAAAGATTCCACTTGGTGTGGTTTT
GGCCATTCCACCGTTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTG
CTCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAG
GGTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTT
TCCTAAAGGCCTTATAAGCTGTGTCACCGGGAAAGGTTCTGAGATTGGTG
ATTTCCTTACTATGCATCCTGCAGTGAACTGTATAAGCTTCACTGGTGGA
GACACTGGAATTTCAATCTCGAAGAAAGCTGGTATGATCCCTCTTCATAT
GGAGTTGGGAGGCAAAAATGCTTGTACCGTGCTTGAGGATGCTGACCTTG
ATTTGGTTGCCGCAAACATAATAAAAGGATGAATTTCTTACAGTGGTAAA
AATGCACTGCATTAAAGTGTCTTGGTGAAGAATCTGTACAAATTCCCTGT
CAAAAAGGTAAAGTTAATTGGAAAACTAAAATTGGCCCTCCTAAAAAAAC
TGGTAATCCATCAATTGTGTCAATTTTTGCAATTTCTTGAAGGGTGGTAG
GAAGCCAAACAAAGAAAAACATCTTAAAAAACAAGAAAAAGAACCTCACA
GGCCTTTTCTTAGAAGTGAAAAAAAATAAAACAAGGAGAAAAATTTAAAC
ATTTACCTGAATAATATGATATTTAAGAGATACACAGATAGCACACATTG
AACTAGTATTTATTCAAAGAAATTAAATATGTACAGATATAAAGAAAACT
ACCAAAAGTTCCCCCCTTGATAAAATTTTCTTTAGTGTGTACATACTATG
AATAAAGCAAAAAAACTATTCTAACTTAGACTAGAAAATCAATGCCAATA
CGGTAAAATAATGATTTGACATAGAATGATATTTAATAGAAAATTAGAAA
TAATATCAATAAGTGATATAAATTAAACCTTGATGAATGAAACGAGGAGA
GGACTAATGATGAAATACAAAAAATAATAAACAAAAAGAATAAAAAACCA
TCAAGAACTANCTAATACAATGCCGAACAACACGCA
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