EY665281

Overview
NameEY665281
Unique NameEY665281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1168
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665281 vs. ExPASy Swiss-Prot
Match: UBC27_ARATH (Ubiquitin carrier protein E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.344e-11
Identity = 39/119 (32.77%), Postives = 58/119 (48.74%), Query Frame = 3 
Query:  243 TIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNV-YPSGTVCLSILIEDNGWRPAITVIQIPCRYP*LVGQPNPADP-------AIQEGYHLFFTDAANYKEKFGTRQRI 575
            TIPG  GT +EGG F + +   + YP +PPK +F    +HPN+   SG +CL IL +   W PA+T+         L+  P P DP          + Y +F + A  + E F  +  +
Sbjct:   38 TIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQ--WSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKNYQVFVSTARYWTETFAKKSSL 154
[Close]
BLAST of EY665281 vs. ExPASy Swiss-Prot
Match: UBC_ASFM2 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 8.286e-11
Identity = 35/99 (35.35%), Postives = 48/99 (48.48%), Query Frame = 3 
Query:  222 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILIEDNG------WRPAITVIQIPCRYP*LVGQPNPADPA 500
            NL  W   + G   T +EGG F   + F   YP +PP+  F    +HPN+Y  G +C+SIL  DN       W PA  +  +      L+ +PNP  PA
Sbjct:   29 NLTEWDVILKGPPDTLYEGGLFKAKIVFPPKYPYEPPRLTFTSEMWHPNIYSDGKLCISILHGDNAEEQGMTWSPAQKIDTVLLSVISLLNEPNPDSPA 127
[Close]
BLAST of EY665281 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 8.286e-11
Identity = 35/103 (33.98%), Postives = 49/103 (47.57%), Query Frame = 3 
Query:  222 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSI----------LIEDNGWRPAITVIQIPCRYP*LVGQPNPADPA 500
            N+  W  TI G   T ++GG+F   + F ++YP+ PP  +F    +HPNVYP G VC+SI           +    W P  TV  I      ++  PN   PA
Sbjct:   36 NVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISIHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPA 138
The following BLAST results are available for this feature:
BLAST of EY665281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
UBC27_ARATH6.344e-1132.77Ubiquitin carrier protein E2 27 OS=Arabidopsis tha... [more]
UBC_ASFM28.286e-1135.35Ubiquitin-conjugating enzyme E2 OS=African swine f... [more]
UBC7_WHEAT8.286e-1133.98Ubiquitin-conjugating enzyme E2 7 OS=Triticum aest... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665281 ID=EY665281; Name=EY665281; organism=Citrus sinensis; type=EST; length=1168bp
ATCAGCCCCATCTTCACTTATAGCCCACCCTTTTTAAAAAAAAAGGAGAA
TAATAATTCATTTTCATTATTTAGTGTTTTTGAGAGCGAGTAAAAGAAAA
GGAAAGAGCGATGTCGGGAGGCATAGCACGTGGTCGGCTGGCTGAGGAGC
GAAAGTCGTGGCGTAAAAATCATCCTCATGGTTTCGTGGCAAAGCCTGAG
ACGTTGCCGGACGGTTCGGTGAATCTGATGGTGTGGCATTGCACTATTCC
CGGAAAAGCCGGAACTGATTGGGAGGGTGGTTTCTTCCCACTCACTCTCC
ACTTCAGCGAAGATTACCCTAGCAAGCCACCAAAGTGCAAGTTTCCGCAA
GGATTTTTCCACCCTAATGTCTATCCATCTGGAACTGTTTGTCTATCTAT
CCTCATTGAAGACAATGGGTGGAGACCAGCCATCACAGTGATCCAAATTC
CTTGTCGGTATCCATGACTGGTGGGACAGCCCAATCCTGCAGATCCTGCC
ATACAAGAAGGTTATCATCTCTTCTTTACAGATGCTGCAAATTACAAAGA
AAAGTTCGGCACACGCCAACGAATACCCTGCACTCCCCCAAATTTATGGT
CTGGTTTTTTATGGGATTTTTTAAACCTCTGGAATTGGGAACTGCTTTTT
GGAAATGCCTTCGCTACTTTGCTTTGAATAAAGGTACCTTTGGAAAAAAA
AAAATAAAAAAAAAAAAGGGGGGCGCCCTAAAGAAAAAGTTATATACGCG
GGGGGGCACGCAACCCTTTAATGGGCCACAATTTTTTCCCGGGGCGGTTT
TACAACCATGGGGGAAACACGGGGTTCCAACTAACTCCTTGGGCCCCCCC
TTTCCCCGGGGTATAAGAGAGAGCCCCCTTTTCTCTCTCAAATTCCCTCA
TAAGAGAAGGGACCCCGATGACACTAACGCGTGGGGGGGGTTAAGAGAGC
TCTTTCAGAGCCACCTCACTTCTTCTCTCTTTTCCAACTCCAGGTTCATT
ATAATGGAGGTTATGTAATTATTTATGCCACAAAAAAAATAGGTGTTGCT
TCCCTCCCCACTCTCTATTCTCAATTTGTTATATTGCACTTATCACCCTT
CTCTTGTTTGGCATATACTATATATTTTATTTCTTCGGATGCTGTTGAAT
ATTTATTTGATTTTTTCA
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