EY665281

Overview
NameEY665281
Unique NameEY665281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1168
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665281 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.194e-17
Identity = 51/143 (35.66%), Postives = 71/143 (49.65%), Query Frame = 3
Query:  126 ARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILIEDNGWRPAITVIQIPCRYP*LVGQPNPADPAIQEGYHLFFTDAANYKEK 554
            AR RL  + K  +++ P G    P        N+M+W+  I G   T +E G F LT+ F+E+YP+KPP  +F    FHPNVY  G +CL IL   N W P   V  I      L+  PNP  PA      L+  +   Y+++
Sbjct:    5 ARRRLMRDFKRLQEDPPTGVSGAPT-----DNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDIL--QNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKR 140          
BLAST of EY665281 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.659e-17
Identity = 48/142 (33.80%), Postives = 73/142 (51.41%), Query Frame = 3
Query:  123 IARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILIEDNGWRPAITVIQIPCRYP*LVGQPNPADPAIQEGYHLFFTDAANYK 548
            +A  R+ +E K  +++ P    A P        ++  W  TI G   + + GG F + +HF  DYP KPPK  F    FHPN+  +G +CL IL +   W PA+T+ ++      L+  PNP DP + E  H++ TD   Y+
Sbjct:    1 MATRRILKELKELQRDPPVSCSAGPT-----GEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYE 135          
BLAST of EY665281 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.473e-17
Identity = 43/110 (39.09%), Postives = 62/110 (56.36%), Query Frame = 3
Query:  222 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILIEDNGWRPAITVIQIPCRYP*LVGQPNPADPAIQEGYHLFFTDAANYKE 551
            +L  W  TI G   + ++GG F LT+HF  DYP KPPK  F    +HPN+  +G++CL IL   + W PA+T+ ++      L+  PNP DP + E   ++ TD   Y E
Sbjct:   29 DLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL--RSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNE 136          
BLAST of EY665281 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 3.473e-17
Identity = 52/143 (36.36%), Postives = 67/143 (46.85%), Query Frame = 3
Query:  126 ARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILIEDNGWRPAITVIQIPCRYP*LVGQPNPADPAIQEGYHLFFTDAANYKEK 554
            AR RL  + K  + + P G    P        N+++W   I G   + WEG  F L+L FSE+YP+  P  KF    FHPNVY  G++CL IL   N W P   +  I      L+  PNP  PA  E   LF  +   Y  K
Sbjct:    5 ARRRLMRDFKRLQSDPPAGISGAPL-----ENNILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPNDAPTVKFLSKMFHPNVYADGSICLDIL--QNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRK 140          
BLAST of EY665281 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.473e-17
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 3
Query:  222 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILIEDNGWRPAITVIQIPCRYP*LVGQPNPADPAIQEGYHLFFTDAANYK 548
            +L  W  TI G   + + GG F L +HF  DYP KPPK  F    +HPN+  +G++CL IL +   W PA+T+ ++      ++  PNP +P + E  H++ TD A Y+
Sbjct:   29 DLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQ--WSPALTISKVLLSICSMLTDPNPDEPLVPEIAHVYKTDRARYE 135          
BLAST of EY665281 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.924e-17
Identity = 50/143 (34.97%), Postives = 71/143 (49.65%), Query Frame = 3
Query:  126 ARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILIEDNGWRPAITVIQIPCRYP*LVGQPNPADPAIQEGYHLFFTDAANYKEK 554
            +R RL  + K  +++ P G    P        N++ W   I G   T +E G F L+L F+E+YP+KPP  KF    FHPNVY  G++CL IL   N W P   V  I      L+ +PNP  PA      L+  +   Y+++
Sbjct:    5 SRRRLMRDFKKLQEDPPAGVSGAPT-----EDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDIL--QNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKR 140          
BLAST of EY665281 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 7.737e-17
Identity = 48/142 (33.80%), Postives = 72/142 (50.70%), Query Frame = 3
Query:  123 IARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILIEDNGWRPAITVIQIPCRYP*LVGQPNPADPAIQEGYHLFFTDAANYK 548
            +A  R++ E +  +++ P    A P    D    +  W  TI G   + + GG F +++ FS DYP KPPK  F    +HPN+   G++CL IL E   W PA T  ++      L+  PNP DP + E  HL+  D + Y+
Sbjct:    1 MASKRISRELRDMQRHPPANCSAGPVAEED----IFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQ--WSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYE 136          
BLAST of EY665281 vs. ExPASy Swiss-Prot
Match: UBC2_USTMA (Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis GN=UBC2 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.011e-16
Identity = 53/140 (37.86%), Postives = 67/140 (47.86%), Query Frame = 3
Query:  126 ARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILIEDNGWRPAITVIQIPCRYP*LVGQPNPADPAIQEGYHLFFTDAANY 545
            ++ RL  + K    + P G    P      + NLM+W+  I G A T +E G F L L F E YP+KPP  KF    FHPNVY +G +CL IL   N W P   V  I      L+  PNP  PA  E   L+  +   Y
Sbjct:    5 SKKRLIRDFKRLSTDPPGGISGAP-----CADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPNKPPTVKFLSKMFHPNVYANGELCLDIL--QNRWSPTYDVAAILTSIQSLLHDPNPNSPANAEAASLYRENMKEY 137          
BLAST of EY665281 vs. ExPASy Swiss-Prot
Match: UBC2_CAEEL (Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.011e-16
Identity = 42/110 (38.18%), Postives = 62/110 (56.36%), Query Frame = 3
Query:  222 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILIEDNGWRPAITVIQIPCRYP*LVGQPNPADPAIQEGYHLFFTDAANYKE 551
            +L  W  TI G   + ++GG F LT+HF  DYP KPPK  F    +HPN+  +G++CL IL   + W PA+T+ ++      L+  PNP DP + E   ++ TD   Y +
Sbjct:   29 DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL--RSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQ 136          
BLAST of EY665281 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.011e-16
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 3
Query:  222 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILIEDNGWRPAITVIQIPCRYP*LVGQPNPADPAIQEGYHLFFTDAANYK 548
            +L  W  TI G + + + GG F L +HF  DYP KPPK  F    +HPN+  +G++CL IL +   W PA+T+ ++      ++  PNP DP + E  H++ T  A Y+
Sbjct:   29 DLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQ--WSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTARAQYE 135          
The following BLAST results are available for this feature:
BLAST of EY665281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
UBCD6_DROME1.194e-1735.66Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophi... [more]
UBC29_ARATH2.659e-1733.80Ubiquitin carrier protein E2 29 OS=Arabidopsis tha... [more]
UBCD1_DROME3.473e-1739.09Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophi... [more]
UBC2_DICDI3.473e-1736.36Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium... [more]
UBC1_COLGL3.473e-1737.61Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletot... [more]
UBC1_CAEEL5.924e-1734.97Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditi... [more]
UBC12_ARATH7.737e-1733.80Probable ubiquitin-conjugating enzyme E2 12 OS=Ara... [more]
UBC2_USTMA1.011e-1637.86Ubiquitin-conjugating enzyme E2 2 OS=Ustilago mayd... [more]
UBC2_CAEEL1.011e-1638.18Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditi... [more]
UBC1_MAGGR1.011e-1637.61Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnapor... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665281 ID=EY665281; Name=EY665281; organism=Citrus sinensis; type=EST; length=1168bp
ATCAGCCCCATCTTCACTTATAGCCCACCCTTTTTAAAAAAAAAGGAGAA
TAATAATTCATTTTCATTATTTAGTGTTTTTGAGAGCGAGTAAAAGAAAA
GGAAAGAGCGATGTCGGGAGGCATAGCACGTGGTCGGCTGGCTGAGGAGC
GAAAGTCGTGGCGTAAAAATCATCCTCATGGTTTCGTGGCAAAGCCTGAG
ACGTTGCCGGACGGTTCGGTGAATCTGATGGTGTGGCATTGCACTATTCC
CGGAAAAGCCGGAACTGATTGGGAGGGTGGTTTCTTCCCACTCACTCTCC
ACTTCAGCGAAGATTACCCTAGCAAGCCACCAAAGTGCAAGTTTCCGCAA
GGATTTTTCCACCCTAATGTCTATCCATCTGGAACTGTTTGTCTATCTAT
CCTCATTGAAGACAATGGGTGGAGACCAGCCATCACAGTGATCCAAATTC
CTTGTCGGTATCCATGACTGGTGGGACAGCCCAATCCTGCAGATCCTGCC
ATACAAGAAGGTTATCATCTCTTCTTTACAGATGCTGCAAATTACAAAGA
AAAGTTCGGCACACGCCAACGAATACCCTGCACTCCCCCAAATTTATGGT
CTGGTTTTTTATGGGATTTTTTAAACCTCTGGAATTGGGAACTGCTTTTT
GGAAATGCCTTCGCTACTTTGCTTTGAATAAAGGTACCTTTGGAAAAAAA
AAAATAAAAAAAAAAAAGGGGGGCGCCCTAAAGAAAAAGTTATATACGCG
GGGGGGCACGCAACCCTTTAATGGGCCACAATTTTTTCCCGGGGCGGTTT
TACAACCATGGGGGAAACACGGGGTTCCAACTAACTCCTTGGGCCCCCCC
TTTCCCCGGGGTATAAGAGAGAGCCCCCTTTTCTCTCTCAAATTCCCTCA
TAAGAGAAGGGACCCCGATGACACTAACGCGTGGGGGGGGTTAAGAGAGC
TCTTTCAGAGCCACCTCACTTCTTCTCTCTTTTCCAACTCCAGGTTCATT
ATAATGGAGGTTATGTAATTATTTATGCCACAAAAAAAATAGGTGTTGCT
TCCCTCCCCACTCTCTATTCTCAATTTGTTATATTGCACTTATCACCCTT
CTCTTGTTTGGCATATACTATATATTTTATTTCTTCGGATGCTGTTGAAT
ATTTATTTGATTTTTTCA
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