CV884444

Overview
NameCV884444
Unique NameCV884444
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV884444_ssr353 microsatellite CV884444_ssr353:353..376. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1135..1962. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIC (Adenosylhomocysteinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ahcY PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.739e-43
Identity = 91/150 (60.67%), Postives = 107/150 (71.33%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            MK MK+ AI+CNIGHFD EI M  L    GV +  IKPQ D++ FP+  S IIVLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPKHLDEKV           LT+L ++QADY+ V  +GP+KP HYRY
Sbjct:  292 MKAMKDGAILCNIGHFDTEIQMSRLNNEKGVTKKEIKPQVDKYTFPDGKS-IIVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPINGPFKPDHYRY 436          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_CHLCH (Adenosylhomocysteinase OS=Chlorobium chlorochromatii (strain CaD3) GN=ahcY PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.966e-43
Identity = 92/150 (61.33%), Postives = 109/150 (72.67%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            MK+M++ AIVCNIGHFDNEI +  L   P VK I IKPQ D+++FP  N  + +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW++    +Y   VY LPK LDE+V           LTRLT EQA+YI VSADGPYKP HYRY
Sbjct:  327 MKQMRDEAIVCNIGHFDNEIQVDKLNNDPTVKIINIKPQVDKYIFPNGNC-MYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWQK----EYAVDVYRLPKALDEEVARLHLEQIGVRLTRLTPEQAEYIGVSADGPYKPEHYRY 471          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_MYCUA (Adenosylhomocysteinase OS=Mycobacterium ulcerans (strain Agy99) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.608e-43
Identity = 89/150 (59.33%), Postives = 107/150 (71.33%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            +K MK+++I+ NIGHFDNEIDM GLE   G  R  IKPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTK+QA+Y+ V  +GPYKP HYRY
Sbjct:  346 IKAMKDHSILGNIGHFDNEIDMAGLER-SGATRTNIKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGRLTKLTKDQAEYLGVDVEGPYKPDHYRY 492          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_MYCMM (Adenosylhomocysteinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.608e-43
Identity = 89/150 (59.33%), Postives = 107/150 (71.33%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            +K MK+++I+ NIGHFDNEIDM GLE   G  R  IKPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTK+QA+Y+ V  +GPYKP HYRY
Sbjct:  346 IKAMKDHSILGNIGHFDNEIDMAGLER-SGATRTNIKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGRLTKLTKDQAEYLGVDVEGPYKPDHYRY 492          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLE (Adenosylhomocysteinase OS=Mycobacterium leprae GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.631e-43
Identity = 89/150 (59.33%), Postives = 106/150 (70.67%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            MK MK++AI+ NIGHFDNEIDM  LE   G  R+ IKPQ D W F ++   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +     Y+ +VY LPKHLDEKV           LT+LTK+QA+Y+ V  DGP+KP HYRY
Sbjct:  346 MKAMKDHAILGNIGHFDNEIDMAALER-SGATRLNIKPQVDLWTFGDSGKSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--DYDNEVYRLPKHLDEKVARVHVEALGGQLTKLTKDQAEYLGVDVDGPFKPDHYRY 492          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLB (Adenosylhomocysteinase OS=Mycobacterium leprae (strain Br4923) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.631e-43
Identity = 89/150 (59.33%), Postives = 106/150 (70.67%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            MK MK++AI+ NIGHFDNEIDM  LE   G  R+ IKPQ D W F ++   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +     Y+ +VY LPKHLDEKV           LT+LTK+QA+Y+ V  DGP+KP HYRY
Sbjct:  346 MKAMKDHAILGNIGHFDNEIDMAALER-SGATRLNIKPQVDLWTFGDSGKSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--DYDNEVYRLPKHLDEKVARVHVEALGGQLTKLTKDQAEYLGVDVDGPFKPDHYRY 492          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBL (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.631e-43
Identity = 89/150 (59.33%), Postives = 108/150 (72.00%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            MK MK+ AI+CNIGHFD EI M  L +  GV +  IKPQ D++ FP+  S I+VLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPKHLDEKV           LT+L ++QADY+ V  +GP+KP +YRY
Sbjct:  292 MKAMKDGAILCNIGHFDTEIQMSRLNSEKGVTKKEIKPQVDKYTFPDGKS-IVVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPLNGPFKPENYRY 436          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBJ (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.631e-43
Identity = 89/150 (59.33%), Postives = 108/150 (72.00%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            MK MK+ AI+CNIGHFD EI M  L +  GV +  IKPQ D++ FP+  S I+VLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPKHLDEKV           LT+L ++QADY+ V  +GP+KP +YRY
Sbjct:  292 MKAMKDGAILCNIGHFDTEIQMSRLNSEKGVTKKEIKPQVDKYTFPDGKS-IVVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPLNGPFKPENYRY 436          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_RALME (Adenosylhomocysteinase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.472e-42
Identity = 90/150 (60.00%), Postives = 105/150 (70.00%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M KMK+ AIVCNIGHFDNEID+  +E Y   +   IKPQ D   FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW E+ +GKY   VYVLPKHLDEKV           LT LT++QA YI V  +GPYK  HYRY
Sbjct:  327 MAKMKDQAIVCNIGHFDNEIDIASVEKYEWDE---IKPQVDHVKFPDGKK-IIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWAERDSGKYPVGVYVLPKHLDEKVARLQLRKLNAQLTELTEQQAAYIGVKKEGPYKADHYRY 472          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_PROMP (Adenosylhomocysteinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.472e-42
Identity = 92/148 (62.16%), Postives = 108/148 (72.97%), Query Frame = -1
Query:  385 KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 828
            KMK+ AIVCNIGHFDNEID+  L+ YP      IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +  + +Y K+VYVLPKHLDE V           LT+LTK+QADYI+VS +GPYKP  YRY
Sbjct:  331 KMKDEAIVCNIGHFDNEIDVASLKDYPWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNK--SDEYSKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKDQADYINVSVEGPYKPEQYRY 472          
The following BLAST results are available for this feature:
BLAST of CV884444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_LEPIC1.739e-4360.67Adenosylhomocysteinase OS=Leptospira interrogans s... [more]
SAHH_CHLCH2.966e-4361.33Adenosylhomocysteinase OS=Chlorobium chlorochromat... [more]
SAHH_MYCUA6.608e-4359.33Adenosylhomocysteinase OS=Mycobacterium ulcerans (... [more]
SAHH_MYCMM6.608e-4359.33Adenosylhomocysteinase OS=Mycobacterium marinum (s... [more]
SAHH_MYCLE8.631e-4359.33Adenosylhomocysteinase OS=Mycobacterium leprae GN=... [more]
SAHH_MYCLB8.631e-4359.33Adenosylhomocysteinase OS=Mycobacterium leprae (st... [more]
SAHH_LEPBL8.631e-4359.33Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_LEPBJ8.631e-4359.33Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_RALME1.472e-4260.00Adenosylhomocysteinase OS=Ralstonia metallidurans ... [more]
SAHH_PROMP1.472e-4262.16Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003E03_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884444 ID=CV884444; Name=CV884444; organism=Citrus sinensis; type=EST; length=834bp
TTTTTTTTTTTTTTTTATAATGATTTTTCATTTAGATAAGAAACTGGGAA
AAAGATTTTTTTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAA
CAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCACCAAATACAAAATA
ATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCA
ATCAACGGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAA
CACACACTACTACGAAATTTAAACCTAACATCCTACTACAGATCATCATT
GAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTC
ACTCTTCTTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGA
GGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTT
GGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAA
CCTTTTCATCGAGGTGCTTGGGCAGAACGTACACCTTCTTCTCGTACTTG
CCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGGTTGGT
GAAGGAGCAGGACATCACAAAGCTGGGGTGTCCAGTGGCACATCCCAAGT
TCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCCGGG
AAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGCTTAACACCCGG
GTAGGTCTCAAGACCGAGCATATCAATTTCATTATCAAAGTGACCAATGT
TGCAAACAATTGCATTGTTCTTCATCTTCTTCAT
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