CV884444

Overview
NameCV884444
Unique NameCV884444
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS3 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9311) GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.776e-41
Identity = 91/148 (61.49%), Postives = 108/148 (72.97%), Query Frame = -1
Query:  385 KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 828
            KMK+ AIVCNIGHFDNEID+  L++Y   +   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + S  +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GPYKP HYRY
Sbjct:  335 KMKDEAIVCNIGHFDNEIDVASLKSY---EWDNIKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGS--EYGKEVYVLPKHLDEMVARLHLEKIGCKLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_PROM0 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.776e-41
Identity = 92/148 (62.16%), Postives = 105/148 (70.95%), Query Frame = -1
Query:  385 KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 828
            KMK+ AIVCNIGHFDNEID+  L+ Y       IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPKHLDE V           LT+LTKEQADYISVS +GPYK   YRY
Sbjct:  331 KMKDEAIVCNIGHFDNEIDVASLKNYQWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNKSE--QYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKEQADYISVSVEGPYKSEFYRY 472          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_PELPB (Adenosylhomocysteinase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.776e-41
Identity = 90/150 (60.00%), Postives = 103/150 (68.67%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            MK+MK+ AIVCNIGHFDNEI +  L  Y G  R+ IKPQ D++ F E  + I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW    T  Y   VY LPK LDE+V           LTRL+ EQA YI V  DGPYKP HYRY
Sbjct:  327 MKQMKDEAIVCNIGHFDNEIQVEQLYAYAGATRLNIKPQVDKYTF-ENGNCIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELW----TKDYAVGVYRLPKELDEEVARLHLEQLGVKLTRLSDEQAAYIGVPLDGPYKPEHYRY 471          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_PELCD (Adenosylhomocysteinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.776e-41
Identity = 88/150 (58.67%), Postives = 107/150 (71.33%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M  MKN AIVCNIGHFD+EI +  L   P +    +KPQ D+  +P+    I VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+  ++ +YE KVYVLPK LDEKV           LTR+T++QADY+ V  DGPYKP HYRY
Sbjct:  329 MDVMKNEAIVCNIGHFDSEIQVDALYDDPSLTVHEVKPQVDQIEWPD-GKRITVLAKGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQ--NSDRYENKVYVLPKQLDEKVARLHLANLGVKLTRMTEKQADYLGVPVDGPYKPEHYRY 475          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_DESAD (Adenosylhomocysteinase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.776e-41
Identity = 89/150 (59.33%), Postives = 106/150 (70.67%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            + KMK+ AI+CNIGHFDNEI+M  LE     K+I IKPQ D+WV  E+   +IVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ++L K     +YE KV +L K LDE+V           L  L+KEQADYISV  +GPYKP HYRY
Sbjct:  328 ISKMKDEAIICNIGHFDNEIEMGYLENSKTAKKIEIKPQVDKWVM-ESGKSVIVLAEGRLVNLGCATGHPSFVMSNSFTNQALAQIDLAK----NEYEPKVMILSKKLDEEVARLHLERLGVELDVLSKEQADYISVDVEGPYKPDHYRY 472          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_RALPJ (Adenosylhomocysteinase OS=Ralstonia pickettii (strain 12J) GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.626e-41
Identity = 90/152 (59.21%), Postives = 104/152 (68.42%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKE--KSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M KMK+ AIVCNIGHFDNEID+  +E Y   +   IKPQ D  +FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW E  K + KY   VY LPKHLDEKV           LT LT +QA YI VS +GPYK  HYRY
Sbjct:  327 MAKMKDQAIVCNIGHFDNEIDIASVEKYQWEE---IKPQVDHVIFPDGKK-IIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWTEAVKGSNKYPVGVYTLPKHLDEKVARLQLKKLNAQLTELTDQQAAYIGVSKEGPYKADHYRY 474          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFM (Adenosylhomocysteinase OS=Xylella fastidiosa (strain M12) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.185e-41
Identity = 84/150 (56.00%), Postives = 104/150 (69.33%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M  MK+  IVCNIGHFDNEI +  L T  GV++I IKPQ D+++ P  N+ + +LAEGRL+NLGCATGHPSFVMS SF NQ +AQ++LW+ K    YEK VY LPK LDE+V           LT LT  QA Y+ +S +GP+KP HYRY
Sbjct:  334 MTAMKDQVIVCNIGHFDNEIQVDALNTLTGVQKINIKPQVDKFILPNGNT-LFLLAEGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWQNKDV--YEKNVYRLPKKLDEEVARLHLEKIGVKLTTLTANQAAYLGISVEGPFKPEHYRY 480          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_PROVI (Adenosylhomocysteinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.185e-41
Identity = 89/150 (59.33%), Postives = 102/150 (68.00%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            MK+M + AIVCNIGHFDNEI +  L  Y G  ++ IKPQ D++ F E    I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELWK      YE  VY LPK LDE+V           LT L+KEQADYI V   GPYKP HYRY
Sbjct:  327 MKQMPDEAIVCNIGHFDNEIQVEPLNEYKGATKLNIKPQVDKYTF-EDGHCIYMLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWK----NDYEIGVYRLPKALDEEVARLHLEQIGVKLTTLSKEQADYIGVPVSGPYKPEHYRY 471          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_PROM3 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.185e-41
Identity = 91/148 (61.49%), Postives = 104/148 (70.27%), Query Frame = -1
Query:  385 KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 828
            +MK+ AIVCNIGHFDNEID+  L+ Y       IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    KY  +VYVLPKHLDE V           LT LTK+QADYISV  +GPYKP HYRY
Sbjct:  335 RMKDEAIVCNIGHFDNEIDVASLKDYSWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFSKGD--KYADQVYVLPKHLDEMVARLHLEKIGARLTELTKQQADYISVPIEGPYKPDHYRY 476          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_DESDG (Adenosylhomocysteinase OS=Desulfovibrio desulfuricans (strain G20) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.185e-41
Identity = 91/150 (60.67%), Postives = 103/150 (68.67%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M++MK+ AIVCNIGHFDNEIDM  LE       + IKPQ D+W      S IIVLAEGRL+NLGCATGHPSFVMS SFTNQV+AQLEL    S    E+KVY+LPK LDE+V           LT LT EQA+YI V   GP+KP HYRY
Sbjct:  334 MERMKDEAIVCNIGHFDNEIDMAYLEDSTECSCLNIKPQVDKWTLKSGRS-IIVLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQLEL---ASNPDLERKVYILPKKLDEEVARLHLARLGAKLTTLTDEQAEYIGVDKTGPFKPDHYRY 479          
The following BLAST results are available for this feature:
BLAST of CV884444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_SYNS32.776e-4161.49Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_PROM02.776e-4162.16Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_PELPB2.776e-4160.00Adenosylhomocysteinase OS=Pelodictyon phaeoclathra... [more]
SAHH_PELCD2.776e-4158.67Adenosylhomocysteinase OS=Pelobacter carbinolicus ... [more]
SAHH_DESAD2.776e-4159.33Adenosylhomocysteinase OS=Desulfovibrio salexigens... [more]
SAHH_RALPJ3.626e-4159.21Adenosylhomocysteinase OS=Ralstonia pickettii (str... [more]
SAHH_XYLFM6.185e-4156.00Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]
SAHH_PROVI6.185e-4159.33Adenosylhomocysteinase OS=Prosthecochloris vibriof... [more]
SAHH_PROM36.185e-4161.49Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_DESDG6.185e-4160.67Adenosylhomocysteinase OS=Desulfovibrio desulfuric... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_003E03_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884444 ID=CV884444; Name=CV884444; organism=Citrus sinensis; type=EST; length=834bp
TTTTTTTTTTTTTTTTATAATGATTTTTCATTTAGATAAGAAACTGGGAA
AAAGATTTTTTTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAA
CAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCACCAAATACAAAATA
ATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCA
ATCAACGGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAA
CACACACTACTACGAAATTTAAACCTAACATCCTACTACAGATCATCATT
GAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTC
ACTCTTCTTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGA
GGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTT
GGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAA
CCTTTTCATCGAGGTGCTTGGGCAGAACGTACACCTTCTTCTCGTACTTG
CCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGGTTGGT
GAAGGAGCAGGACATCACAAAGCTGGGGTGTCCAGTGGCACATCCCAAGT
TCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCCGGG
AAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGCTTAACACCCGG
GTAGGTCTCAAGACCGAGCATATCAATTTCATTATCAAAGTGACCAATGT
TGCAAACAATTGCATTGTTCTTCATCTTCTTCAT
back to top