CV884444

Overview
NameCV884444
Unique NameCV884444
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPX (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH8102) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 90/150 (60.00%), Postives = 109/150 (72.67%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            ++KMK+ AIVCNIGHFDNEID+  L+ Y   +   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GPYKP HYRY
Sbjct:  333 LEKMKDEAIVCNIGHFDNEIDVASLKGY---EWDNIKPQVDHITLPSGNR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGN--EYGKEVYVLPKHLDEMVARLHLDRIGAKLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_CAUCR (Adenosylhomocysteinase OS=Caulobacter crescentus GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 90/150 (60.00%), Postives = 104/150 (69.33%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M+KMKNNAIVCNIGHFD+EI + GL  +   K   IKPQ     FP+    +IVL+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+ELW  K+  KYE +VY LPKHLDEKV           LT L K+QADYI V   GP+KP HYRY
Sbjct:  320 MRKMKNNAIVCNIGHFDSEIQIAGLRNF---KWDEIKPQVHHVEFPDGKK-LIVLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELWTNKA--KYENQVYTLPKHLDEKVAFLHLEKLGAKLTTLRKDQADYIGVPEAGPFKPDHYRY 463          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_RHOBA (Adenosylhomocysteinase OS=Rhodopirellula baltica GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.055e-40
Identity = 87/157 (55.41%), Postives = 108/157 (68.79%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRIT---IKPQ----TDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            MK+M N+AI+CNIGHFD EID+   E      + T   IKP      DR+ F +T   II+LA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+EL++ +   KY  +VY+LPK LDE+V           LT+LT+EQADYI V  +GPYKP HYRY
Sbjct:  292 MKQMPNDAILCNIGHFDTEIDIAWAEQQVADGKATVSEIKPSDIGAVDRFTFNDTGRSIIILAKGRLVNLGCATGHPSFVMSSSFTNQVLAQMELYQNRDNDKYGVQVYLLPKELDEEVARLHLEAIGVKLTKLTQEQADYIGVPVEGPYKPNHYRY 448          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_RALSO (Adenosylhomocysteinase OS=Ralstonia solanacearum GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.055e-40
Identity = 90/152 (59.21%), Postives = 104/152 (68.42%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKE--KSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M KMK+ AIVCNIGHFDNEID+  +E Y   +   IKPQ D  +FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW E  K + KY   VY LPKHLDEKV           LT LT +QA YI VS +GPYK  HYRY
Sbjct:  327 MAKMKDQAIVCNIGHFDNEIDIASVEQYQWEE---IKPQVDHVIFPDGKK-IIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWTEAQKGSSKYPVGVYTLPKHLDEKVARLQLKKLNAQLTVLTDKQAAYIGVSKEGPYKADHYRY 474          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_COXB1 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuK_Q154) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.055e-40
Identity = 88/150 (58.67%), Postives = 108/150 (72.00%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M KMK+ AIVCNIGHFDNEID+  L+ Y   + + IKPQ D+ +FP+    ++VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V           LT LT++QADYI V  +GP+K  HYRY
Sbjct:  295 MLKMKDQAIVCNIGHFDNEIDIASLQDY---QWMNIKPQVDQVIFPD-GKRLMVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGAKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_BURP8 (Adenosylhomocysteinase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.055e-40
Identity = 90/150 (60.00%), Postives = 104/150 (69.33%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            MK M++NAIVCNIGHFD+EID+     Y       IKPQ D  +FP+    +I+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+ E S  KYE KVYVLPK LDEKV           LT LT EQA YI V  +GP+KP HYRY
Sbjct:  330 MKAMRHNAIVCNIGHFDSEIDVASTRQYTWEN---IKPQVDHIIFPD-GKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFVEGS--KYENKVYVLPKQLDEKVARLHLARIGANLTELTSEQAGYIGVDKNGPFKPNHYRY 473          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_SYNSC (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9605) GN=ahcY PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.378e-40
Identity = 90/148 (60.81%), Postives = 105/148 (70.95%), Query Frame = -1
Query:  385 KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 828
            KMK+ AIVCNIGHFDNEID+  L+ Y       IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GPYKP HYRY
Sbjct:  335 KMKDEAIVCNIGHFDNEIDVASLKEYEWEN---IKPQVDHITLPSGNR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGD--EYAKEVYVLPKHLDEMVARLHLGRIGANLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_NITEC (Adenosylhomocysteinase OS=Nitrosomonas eutropha (strain C91) GN=ahcY PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.800e-40
Identity = 91/151 (60.26%), Postives = 106/151 (70.20%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGK-YEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M KMKN AIVCNIGHFD+EID+  ++ Y       IKPQ D  +FP T   IIVLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+    GK Y+KKVYVLPK LDE V           LT LT EQA Y+++  +GPYKP  YRY
Sbjct:  335 MLKMKNQAIVCNIGHFDSEIDIASVQKYQWEN---IKPQVDHVIFP-TGRRIIVLAQGRLVNLGCATGHPSFVMSSSFTNQVLAQMELWQ---NGKDYQKKVYVLPKQLDEMVARLHLGKLGVKLTELTDEQAHYLNLDKNGPYKPEMYRY 478          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_COXBU (Adenosylhomocysteinase OS=Coxiella burnetii GN=ahcY PE=3 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.800e-40
Identity = 88/150 (58.67%), Postives = 107/150 (71.33%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M KMK+ AIVCNIGHFDNEID+  L+ Y   + + IKPQ D+ +FP+    + VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V           LT LT++QADYI V  +GP+K  HYRY
Sbjct:  295 MLKMKDQAIVCNIGHFDNEIDIASLQDY---QWMNIKPQVDQVIFPD-GKRLTVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGGKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_COXBN (Adenosylhomocysteinase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=ahcY PE=3 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.800e-40
Identity = 88/150 (58.67%), Postives = 107/150 (71.33%), Query Frame = -1
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M KMK+ AIVCNIGHFDNEID+  L+ Y   + + IKPQ D+ +FP+    + VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V           LT LT++QADYI V  +GP+K  HYRY
Sbjct:  295 MLKMKDQAIVCNIGHFDNEIDIASLQDY---QWMNIKPQVDQVIFPD-GKRLTVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGAKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
The following BLAST results are available for this feature:
BLAST of CV884444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_SYNPX8.078e-4160.00Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_CAUCR8.078e-4160.00Adenosylhomocysteinase OS=Caulobacter crescentus G... [more]
SAHH_RHOBA1.055e-4055.41Adenosylhomocysteinase OS=Rhodopirellula baltica G... [more]
SAHH_RALSO1.055e-4059.21Adenosylhomocysteinase OS=Ralstonia solanacearum G... [more]
SAHH_COXB11.055e-4058.67Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_BURP81.055e-4060.00Adenosylhomocysteinase OS=Burkholderia phymatum (s... [more]
SAHH_SYNSC1.378e-4060.81Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_NITEC1.800e-4060.26Adenosylhomocysteinase OS=Nitrosomonas eutropha (s... [more]
SAHH_COXBU1.800e-4058.67Adenosylhomocysteinase OS=Coxiella burnetii GN=ahc... [more]
SAHH_COXBN1.800e-4058.67Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003E03_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884444 ID=CV884444; Name=CV884444; organism=Citrus sinensis; type=EST; length=834bp
TTTTTTTTTTTTTTTTATAATGATTTTTCATTTAGATAAGAAACTGGGAA
AAAGATTTTTTTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAA
CAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCACCAAATACAAAATA
ATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCA
ATCAACGGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAA
CACACACTACTACGAAATTTAAACCTAACATCCTACTACAGATCATCATT
GAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTC
ACTCTTCTTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGA
GGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTT
GGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAA
CCTTTTCATCGAGGTGCTTGGGCAGAACGTACACCTTCTTCTCGTACTTG
CCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGGTTGGT
GAAGGAGCAGGACATCACAAAGCTGGGGTGTCCAGTGGCACATCCCAAGT
TCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCCGGG
AAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGCTTAACACCCGG
GTAGGTCTCAAGACCGAGCATATCAATTTCATTATCAAAGTGACCAATGT
TGCAAACAATTGCATTGTTCTTCATCTTCTTCAT
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