CV884442

Overview
NameCV884442
Unique NameCV884442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1057 contig Csv1_Contig1057:42..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI_ARALP (Chalcone--flavonone isomerase OS=Arabidopsis lyrata subsp. petraea GN=CHI PE=3 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 9.917e-81
Identity = 151/219 (68.95%), Postives = 183/219 (83.56%), Query Frame = -1
Query:  143 SPMNPS--PSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 790
            SP++PS  PSVT+LQV++VTF PS++ P S+   FLGGAG RGL+I+GKFV FT IGVYLE NAVP L+ KWKGKT EEL+ESV FFR++VTG FEKF+KVTM LPLTG QYSEKV ENC+AIWK  GIYTD EAKA+EKF  +FK+E FPPGSSILF  S +GSLT++FS+D SIP+ G+AVIEN LL+EAVLES+IGKNGVSP  + S+AER++ L+
Sbjct:    4 SPVSPSQFPSVTKLQVDSVTFDPSVKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLESNAVPSLSVKWKGKTTEELSESVPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKSLGIYTDCEAKAVEKFLEIFKEETFPPGSSILFALSPTGSLTVAFSRDDSIPETGIAVIENKLLAEAVLESIIGKNGVSPGTRLSIAERLAKLM 222          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI1_PETHY (Chalcone--flavonone isomerase A OS=Petunia hybrida GN=CHI1 PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 3.768e-80
Identity = 153/215 (71.16%), Postives = 176/215 (81.86%), Query Frame = -1
Query:  143 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 784
            M+P  SVT++QVEN  F P++ P GST + FL GAG RGLEIEGKFVKFTAIGVYLEE+A+P LA KWKGKT +ELT+SVEFFRDVVTGPFEKF +VTMILPLTG QYSEKVAENC+A WK  G YTD E +AIEKF  VF+ E FPPG+SI+FTQS  G LTISF+KD S+     AVIEN  LSEAVLES+IGK+GVSPAAK S+AER++ LL
Sbjct:    1 MSPPVSVTKMQVENYAFAPTVNPAGSTNTLFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSETFPPGASIMFTQSPLGLLTISFAKDDSVTGTANAVIENKQLSEAVLESIIGKHGVSPAAKCSVAERVAELL 215          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI_CLITE (Chalcone--flavonone isomerase OS=Clitoria ternatea GN=CHI PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 4.922e-80
Identity = 153/218 (70.18%), Postives = 177/218 (81.19%), Query Frame = -1
Query:  119 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTSDKMK 769
            S+T ++V+NV F P+++PP S  + FLGGAG RGL+IE KFVKFTAIG+YL ++A+P LA KW GK+  ELTESVEFFRD+VTGPFEKFM+VTMILPLTG QYSEKV+ENC+AIWK  GIYTDAEAKAI+KF +VFKDE FPPGSSILFT S  GSL I+FSKDGS       VIEN LLSEAVLESMIGK+GVSPAAK+SLA R+S L     D  K
Sbjct:    6 SLTAVEVDNVVFPPAVKPPSSADTFFLGGAGVRGLQIEDKFVKFTAIGIYLHDDALPFLAAKWNGKSDHELTESVEFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIDKFVSVFKDETFPPGSSILFTVSPKGSLGITFSKDGST----TTVIENKLLSEAVLESMIGKHGVSPAAKQSLASRLSGLFKAGGDTDK 219          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI1_ARATH (Chalcone--flavonone isomerase 1 OS=Arabidopsis thaliana GN=CHI1 PE=2 SV=2)

HSP 1 Score: 297.745 bits (761), Expect = 4.922e-80
Identity = 148/220 (67.27%), Postives = 180/220 (81.82%), Query Frame = -1
Query:  125 NPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTSDK 781
            +P P+VT+L V++VTF PS++ P S+   FLGGAG RGL+I+GKFV FT IGVYLE NAVP L+ KWKGKT EELTES+ FFR++VTG FEKF+KVTM LPLTG QYSEKV ENC+AIWK  G+YTD EAKA+EKF  +FK+E FPPGSSILF  S +GSLT++FSKD SIP+ G+AVIEN LL+EAVLES+IGKNGVSP  + S+AER+S L+    D+
Sbjct:   11 SPFPAVTKLHVDSVTFVPSVKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLEGNAVPSLSVKWKGKTTEELTESIPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKQLGLYTDCEAKAVEKFLEIFKEETFPPGSSILFALSPTGSLTVAFSKDDSIPETGIAVIENKLLAEAVLESIIGKNGVSPGTRLSVAERLSQLMMKNKDE 230          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI3_PETHY (Chalcone--flavonone isomerase C OS=Petunia hybrida GN=CHI3 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 4.166e-79
Identity = 151/215 (70.23%), Postives = 175/215 (81.40%), Query Frame = -1
Query:  143 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 784
            M+P  SVT++QVEN  F P++ P GST + FL GAG RGLEIEGKFVKFTAIGVYLEE+A+P LA KWKGKT +ELT+SVEFFRDVVTGPFEKF +VT ILPLTG QYSEKVAENC+A WK  G YTD E +AIEKF  VF+ E FPPG+SI+FTQS  G LTISF+KD S+     AVIEN  LSEAVLES+IGK+GVSPAAK ++AER++ LL
Sbjct:    1 MSPPVSVTKMQVENYAFAPTVNPAGSTNTLFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTTILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSETFPPGASIMFTQSPLGLLTISFAKDDSVTGTANAVIENKQLSEAVLESIIGKHGVSPAAKCNVAERVAELL 215          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI_VERHY (Chalcone--flavonone isomerase OS=Verbena hybrida GN=CHI PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.583e-78
Identity = 149/211 (70.62%), Postives = 176/211 (83.41%), Query Frame = -1
Query:  143 PSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 772
            PS+TE+QVE+V F P+++PPGS K+ FLGGAG RGLEIEGKF+KFTAIGVYLE +AV  LA KWKGKTAEE+ +S +FF ++VTGPFEKF KVT ILPLTG QYSEKV ENC+A WK  G +TDAE +A +KF  VFK+E+F PG+SILFTQS  GSLTISFSKDGSIP+   A+IEN  LSEAVLES+IGK GVSP+AK+SLA R+S LL
Sbjct:    5 PSITEVQVESVVFPPAVKPPGSDKTFFLGGAGVRGLEIEGKFIKFTAIGVYLENDAVTSLAAKWKGKTAEEVADSGDFFAEIVTGPFEKFTKVTTILPLTGQQYSEKVVENCVAYWKAIGKFTDAEDEATKKFLQVFKNEMFHPGASILFTQSPQGSLTISFSKDGSIPEKENAIIENKQLSEAVLESIIGKKGVSPSAKQSLAARLSDLL 215          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI2_CHRMO (Chalcone--flavonone isomerase 2 OS=Chrysanthemum morifolium GN=CHI2 PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.701e-78
Identity = 145/216 (67.13%), Postives = 172/216 (79.63%), Query Frame = -1
Query:  125 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTSDK 769
            S T L VEN+ F  S++PPG T + FLGGAG RG+EI+G FVKFT IGVYLE+ A+PLLAGKWKGKTAEEL  SVEFFRD+VTGPF+KF +VTMILPLTG QYSEKV+E C+ +WK  G YTDA+   I+KF  VFKDE FPPG+SILFT S  GSLTISFSKDG IP+    V+EN  L++AV+ES+IGKNGVSPA K+SLA R+S L+N   +K
Sbjct:    6 SATSLNVENIVFPSSVKPPGDTNTLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPLLAGKWKGKTAEELVNSVEFFRDIVTGPFKKFTQVTMILPLTGKQYSEKVSEMCVGVWKAHGTYTDADGATIDKFLEVFKDENFPPGASILFTTSPDGSLTISFSKDGMIPEAANIVLENEKLAQAVIESVIGKNGVSPATKQSLASRLSDLMNHFDEK 221          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI1_CHRMO (Chalcone--flavonone isomerase 1 OS=Chrysanthemum morifolium GN=CHI1 PE=2 SV=2)

HSP 1 Score: 290.812 bits (743), Expect = 6.016e-78
Identity = 144/216 (66.67%), Postives = 172/216 (79.63%), Query Frame = -1
Query:  125 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTSDK 769
            S T L VEN+ F  S++PPG T + FLGGAG RG+EI+G FVKFT IGVYLE+ A+PLLAGKWKGKTAEEL  SVEFFRD+VTGPF+KF +VTMILPLTG QYSEKV+E C+ +WK  G YTDA+   I+KF  VFKDE FPPG+SILFT S  GSLTISFSKDG IP+    V+EN  L++AV+ES+IGKNGVSPA K+SLA R++ L+N   +K
Sbjct:    6 SATSLNVENIVFPSSVKPPGDTNTLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPLLAGKWKGKTAEELVNSVEFFRDIVTGPFKKFTQVTMILPLTGKQYSEKVSEMCVGVWKAHGTYTDADGATIDKFLEVFKDENFPPGASILFTTSPDGSLTISFSKDGMIPEAANIVLENEKLAQAVIESVIGKNGVSPATKQSLASRLADLMNHFDEK 221          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI_GENTR (Chalcone--flavonone isomerase OS=Gentiana triflora GN=CHI PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 6.652e-77
Identity = 146/210 (69.52%), Postives = 171/210 (81.43%), Query Frame = -1
Query:  140 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 769
            SVTE++VE+  F PS++PP STKS  LGGAG RGLEI G FVKFTAIGVYLEE+ V +L+GKWKGKTAEEL++SVEFF D++TGPFEKF +VT+ILP+TG QYS KVAENC A WK  GIYTDA+  AIEKF  VF+ E F PG SILFT S  SLTISF K+G+IP+   AVIEN  LSEAV+ES+IG+ GVSPAAKKSLA RI+ +LN
Sbjct:    8 SVTEVKVESYVFPPSVKPPSSTKSFLLGGAGVRGLEINGNFVKFTAIGVYLEESGVAVLSGKWKGKTAEELSDSVEFFTDIITGPFEKFTQVTLILPVTGQQYSPKVAENCAAQWKAAGIYTDADGIAIEKFLQVFQTESFTPGDSILFTHSPESLTISFGKNGAIPEVSNAVIENKKLSEAVIESIIGEKGVSPAAKKSLATRIAEILN 217          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI_DIACA (Chalcone--flavonone isomerase OS=Dianthus caryophyllus GN=CHI PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.482e-76
Identity = 143/210 (68.10%), Postives = 176/210 (83.81%), Query Frame = -1
Query:  140 VTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 766
            +T++QVE+  F P ++PPGS K+ FLGGAG RGLEI+GKF+KFTAI VY+E++AV  LA KWKGKTA+ELT+SV+FF+D+VTGPFEKF +VTMILPLTG QYSEKV ENC+A WK  G YTDAE++A +KF  VFK+   PPG+SILFTQS  GSLTISFSKDGS+P++G  VI N  LSEAVL+S+IGK+GVSP AKKSL+ R+S L+N
Sbjct:    4 ITQIQVESHVFPPEVKPPGSDKTFFLGGAGVRGLEIQGKFIKFTAIAVYIEDDAVSSLAVKWKGKTADELTDSVDFFKDIVTGPFEKFTQVTMILPLTGQQYSEKVVENCVAHWKSVGTYTDAESEATQKFLQVFKNVSNPPGASILFTQSPLGSLTISFSKDGSLPENGKEVIVNKQLSEAVLQSIIGKHGVSPEAKKSLSARLSDLIN 213          
The following BLAST results are available for this feature:
BLAST of CV884442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_ARALP9.917e-8168.95Chalcone--flavonone isomerase OS=Arabidopsis lyrat... [more]
CFI1_PETHY3.768e-8071.16Chalcone--flavonone isomerase A OS=Petunia hybrida... [more]
CFI_CLITE4.922e-8070.18Chalcone--flavonone isomerase OS=Clitoria ternatea... [more]
CFI1_ARATH4.922e-8067.27Chalcone--flavonone isomerase 1 OS=Arabidopsis tha... [more]
CFI3_PETHY4.166e-7970.23Chalcone--flavonone isomerase C OS=Petunia hybrida... [more]
CFI_VERHY1.583e-7870.62Chalcone--flavonone isomerase OS=Verbena hybrida G... [more]
CFI2_CHRMO2.701e-7867.13Chalcone--flavonone isomerase 2 OS=Chrysanthemum m... [more]
CFI1_CHRMO6.016e-7866.67Chalcone--flavonone isomerase 1 OS=Chrysanthemum m... [more]
CFI_GENTR6.652e-7769.52Chalcone--flavonone isomerase OS=Gentiana triflora... [more]
CFI_DIACA1.482e-7668.10Chalcone--flavonone isomerase OS=Dianthus caryophy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003E01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884442 ID=CV884442; Name=CV884442; organism=Citrus sinensis; type=EST; length=811bp
AGGCAAACAACTGAGAGTCCATAGGAAAGGACACTAATTTAACATTAAAG
AAAAAAAAGTTTGCCAATTTAACAACTCTGCCTTCGCTTATTATTTGGCA
AACTTTTCAACTTCTTCATTTCATCTTATCACTAGTTACATTCAACAGTG
CTGATATTCTTTCAGCCAAACTCTTCTTTGCTGCAGGAGAAACACCATTC
TTGCCGATCATCGACTCCAGTACTGCCTCAGAAAGCAGATTATTCTCTAT
TACCGCAACACCATCTTTCGGTATTGAACCGTCTTTGGAGAAGCTGATAG
TCAATGATCCTGATGATTGAGTAAAGAGAATTGAGGATCCTGGTGGGAAA
ATTTCATCCTTGAAGACCGCAGTGAATTTTTCAATAGCTTTGGCTTCAGC
ATCTGTGTAAATTCCAAAAAACTTCCATATGGCCATGCAATTTTCGGCAA
CCTTCTCTGAGTATTGTGCACCAGTTAATGGCAAGATCATTGTCACCTTC
ATGAATTTCTCAAAGGGACCTGTGACGACGTCTCTGAAGAACTCAACGGA
TTCCGTCAACTCCTCCGCAGTCTTCCCCTTCCATTTGCCGGCGAGTAACG
GCACGGCGTTCTCCTCCAAGTACACTCCTATCGCCGTGAACTTCACGAAC
TTCCCTTCAATCTCCAATCCTCTCTCCCCTGCGCCGCCGAGGAAATGCGA
CTTTGTTGATCCTGGAGGTTGCAGGGACGGCGTGAAAGTGACGTTCTCGA
CCTGCAGTTCGGTGACGGACGGTGAGGGATTCATCGGTGACAGCCTTTTT
GATTAATTTCA
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