CV884442

Overview
NameCV884442
Unique NameCV884442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1057 contig Csv1_Contig1057:42..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI2A_SOYBN (Chalcone--flavonone isomerase 2-A OS=Glycine max GN=CHI2-A PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.533e-73
Identity = 144/210 (68.57%), Postives = 171/210 (81.43%), Query Frame = -1
Query:  146 PSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 772
            PSVT + VENVTF P+++PP S  + FL GAG RGL+I   FVKFTAI +YL+ +A+  L+ KWK K+  +LTES +FF D+VTGPFEKFM+VTMI PLTG QYSEKVAENC+AIW+  GIYTD+EA+AI+KF +VFKD  FPPGSSILFT S +GSLTISFS D +IP+   AVIEN LLSEAVLESMIGKNGVSPAAK+SLA R+S L
Sbjct:    4 PSVTSVTVENVTFPPTVKPPCSPNTFFLAGAGVRGLQIHHAFVKFTAICIYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILFTVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMIGKNGVSPAAKQSLASRLSHL 213          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI_MAIZE (Chalcone--flavonone isomerase OS=Zea mays GN=CHI PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.755e-69
Identity = 135/201 (67.16%), Postives = 152/201 (75.62%), Query Frame = -1
Query:  143 VTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 742
            V F P  +PPGS  SHFLGGAG RG+EI G F+KFTAIGVYLE+ AVP LA KW GKTA+EL     FFRDVVTG FEKF +VTMILPLTG QY+EKV ENC+A WK  G+YTDAE  A+EKF  VFK E F PG SILFT S +G LT++FSKD S+P  G   IEN  L EAVLES+IG+ GVSPAAK SLA R+S LL
Sbjct:   11 VVFPPVARPPGSAGSHFLGGAGVRGVEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAAFFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWKAAGLYTDAEGVAVEKFREVFKPETFAPGRSILFTHSPAGVLTVAFSKDSSVPAAGGVAIENKRLCEAVLESIIGERGVSPAAKLSLAARVSELL 211          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI_ORYSJ (Chalcone--flavonone isomerase OS=Oryza sativa subsp. japonica GN=CHI PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.940e-68
Identity = 134/217 (61.75%), Postives = 162/217 (74.65%), Query Frame = -1
Query:  131 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENA-VPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGV--AVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTS 769
            +V+E++V+ V F P  +PPGS  +HFL GAG RG+EI G F+KFTAIGVYLEE A VP LA KW GK+A+EL     FFRDVVTG FEKF +VTMILPLTG QYS+KV ENC+A WK  G+YTDAE  A +KF   FK   FPPG+SILFT S  G LT++FSKD S+P+  V  A IEN  L EAVL+S+IG++GVSPAAK+S+A R+S LL   S
Sbjct:    3 AVSEVEVDGVVFPPVARPPGSGHAHFLAGAGVRGVEIAGNFIKFTAIGVYLEEGAAVPALAKKWAGKSADELAADAAFFRDVVTGDFEKFTRVTMILPLTGEQYSDKVTENCVAAWKAAGVYTDAEGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVPEGAVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAES 219          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI_ORYSI (Chalcone--flavonone isomerase OS=Oryza sativa subsp. indica GN=CHI PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.940e-68
Identity = 134/217 (61.75%), Postives = 162/217 (74.65%), Query Frame = -1
Query:  131 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENA-VPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGV--AVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTS 769
            +V+E++V+ V F P  +PPGS  +HFL GAG RG+EI G F+KFTAIGVYLEE A VP LA KW GK+A+EL     FFRDVVTG FEKF +VTMILPLTG QYS+KV ENC+A WK  G+YTDAE  A +KF   FK   FPPG+SILFT S  G LT++FSKD S+P+  V  A IEN  L EAVL+S+IG++GVSPAAK+S+A R+S LL   S
Sbjct:    3 AVSEVEVDGVVFPPVARPPGSGHAHFLAGAGVRGVEIAGNFIKFTAIGVYLEEGAAVPALAKKWAGKSADELAADAAFFRDVVTGDFEKFTRVTMILPLTGEQYSDKVTENCVAAWKAAGVYTDAEGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVPEGAVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAES 219          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI_HORVU (Chalcone--flavonone isomerase OS=Hordeum vulgare GN=CHI PE=1 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.064e-66
Identity = 130/211 (61.61%), Postives = 158/211 (74.88%), Query Frame = -1
Query:  143 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENA-VPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 769
            +V+EL+V+ V F P  +PPGS  +HFL GAG RG+EI G F+KFTAIGVYL+ +A V  LA KW GK A +L     FFRDVVTG FEKF +VTMILPLTGAQYS+KV ENC+A WK  G+YTDAEA A++KF   F    F PG+SILFT S +G LT++FSKD S+P+ G   IEN  L EAVLES+IG++GVSPAAK SLA R++ LL
Sbjct:    2 AVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQADAAVSALAAKWAGKPAADLASDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAGVYTDAEAAAVDKFKEAFGPHSFAPGASILFTHSPAGVLTVAFSKDSSVPESGGVAIENARLCEAVLESIIGEHGVSPAAKLSLANRVAELL 212          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI_CANGE (Chalcone--flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.064e-66
Identity = 127/211 (60.19%), Postives = 163/211 (77.25%), Query Frame = -1
Query:  143 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQ--SSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 769
            S+ +L +  VTF P+  PPGS+ S FL GAGERGLEI+ +FV FTAIGVYLE+ AV  L  KWKGKTA++L  + +FFRD+ TGPFEKF ++TM+ PL+G QYSEKV ENC+A WK  G YT+AEA A+EKF    K+E FPPG+SILFT   S  SLTI+F ++GS+P+ G  VIE+  LSEA+LES+IGK+GVSP AK+S+A+R+S +L
Sbjct:    7 SLPKLVIGEVTFPPAAAPPGSSSSLFLAGAGERGLEIDRQFVVFTAIGVYLEDLAVSTLGPKWKGKTADDLAGNSDFFRDIFTGPFEKFTRITMVKPLSGQQYSEKVEENCVAHWKAAGTYTEAEAAAVEKFKEACKNETFPPGTSILFTHQVSPASLTITFWREGSMPETGNTVIESKALSEAILESIIGKHGVSPGAKRSVAQRLSEIL 217          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI2_ARATH (Chalcone--flavonone isomerase 2 OS=Arabidopsis thaliana GN=CHI2 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.713e-62
Identity = 131/214 (61.21%), Postives = 154/214 (71.96%), Query Frame = -1
Query:  140 PSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFT-QSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 778
            P PSVT L V+  TF P+++ P S K  FLGGAG        KFV  T IGVYLE  A+P ++ KWKGK A+ELTESV FFR +VTG FEK  +VTM   LTG QYSEKV ENC  I K  G YT +EAKAI++F  VFK++ FPPGSSI+F     GSLTI+FSK+  +PK G AVI+N LL EAVLESMIGKNGVSPA +KSLAER+S L+N
Sbjct:    2 PLPSVTPLHVDAFTFPPAVESPASHKRLFLGGAG--------KFVIVTVIGVYLEAMALPSISAKWKGKNAKELTESVPFFRQLVTGEFEKLARVTMKKRLTGIQYSEKVVENCEEIMKASGKYTRSEAKAIDQFLMVFKNQDFPPGSSIIFAICPKGSLTIAFSKEERVPKTGKAVIKNKLLGEAVLESMIGKNGVSPATRKSLAERLSKLMN 207          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI1A_SOYBN (Chalcone--flavonone isomerase 1A OS=Glycine max GN=CHI1A PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 5.117e-61
Identity = 118/211 (55.92%), Postives = 157/211 (74.41%), Query Frame = -1
Query:  140 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 769
            +++ +QVE + F   +  P S K++FLGGAGERGL IEGKF+KFT IGVYLE+ AVP LA KWKGKT+EEL  ++ F+RD+++GPFEK ++ + ILPL GA+YS+KV ENC+A  K  G Y DAEA AIEKF   FK+  F PG+S+ + QS  G L +SFS+D +IP+   AVIEN  +S AVLE+MIG++ VSP  K+SLA R+ A+L+
Sbjct:    3 TISAVQVEFLEFPAVVTSPASGKTYFLGGAGERGLTIEGKFIKFTGIGVYLEDKAVPSLAAKWKGKTSEELVHTLHFYRDIISGPFEKLIRGSKILPLAGAEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFAPGASVFYRQSPDGILGLSFSEDATIPEKEAAVIENKAVSAAVLETMIGEHAVSPDLKRSLASRLPAVLS 213          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI_PHAVU (Chalcone--flavonone isomerase OS=Phaseolus vulgaris GN=CHI PE=2 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 1.489e-60
Identity = 117/216 (54.17%), Postives = 158/216 (73.15%), Query Frame = -1
Query:  140 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 784
            M  +P++T++QVE + F   +  P + K++FLGGAGERGL IEGKF+KFTAIGVYLE+ AV  LA KWKGK +EEL  +++F+RD+++GPFEK ++ + IL L+G +YS KV ENC+A  K  G Y DAEAK IE+F   FK   FPPG+S+ + QS  G L +SFS+D +IP +   VIEN  +S AVLE+MIG++ VSP  K+SLA R+ A+LN
Sbjct:    1 MATAPTITDVQVEFLHFPAVVTSPATAKTYFLGGAGERGLTIEGKFIKFTAIGVYLEDKAVASLATKWKGKPSEELINTLDFYRDIISGPFEKLIRGSKILQLSGTEYSRKVMENCVAHLKSVGTYGDAEAKGIEEFAEAFKKVNFPPGASVFYRQSPDGILGLSFSEDATIPGEEAVVIENKAVSAAVLETMIGEHAVSPDLKRSLASRLPAVLN 216          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI1_LOTJA (Chalcone--flavonone isomerase 1 OS=Lotus japonicus GN=CHI1 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.944e-60
Identity = 116/211 (54.98%), Postives = 156/211 (73.93%), Query Frame = -1
Query:  140 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 769
            S+T +QVEN+ F  S+  P + KS+FLGGAGERGL IEGKF+KFT IGVYLE+ AV  LA KWKGK+++EL +S++FFRD+++ P EK ++ + + PL+G +YS KV ENC+A  K  G Y +AEA AIEKF   F+   FPPGSS+ + QS+ G L +SFS D +IP++   VIEN  LSEAVLE+MIG++ VSP  K+ LAER+  ++N
Sbjct:    8 SLTPIQVENLQFPASVTSPATAKSYFLGGAGERGLTIEGKFIKFTGIGVYLEDTAVDSLATKWKGKSSQELQDSLDFFRDIISSPSEKLIRGSKLRPLSGVEYSRKVMENCVAHMKSAGTYGEAEATAIEKFAEAFRKVDFPPGSSVFYRQSTDGKLGLSFSLDDTIPEEEAVVIENKALSEAVLETMIGEHAVSPDLKRCLAERLPIVMN 218          
The following BLAST results are available for this feature:
BLAST of CV884442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI2A_SOYBN1.533e-7368.57Chalcone--flavonone isomerase 2-A OS=Glycine max G... [more]
CFI_MAIZE1.755e-6967.16Chalcone--flavonone isomerase OS=Zea mays GN=CHI P... [more]
CFI_ORYSJ1.940e-6861.75Chalcone--flavonone isomerase OS=Oryza sativa subs... [more]
CFI_ORYSI1.940e-6861.75Chalcone--flavonone isomerase OS=Oryza sativa subs... [more]
CFI_HORVU1.064e-6661.61Chalcone--flavonone isomerase OS=Hordeum vulgare G... [more]
CFI_CANGE1.064e-6660.19Chalcone--flavonone isomerase OS=Canna generalis G... [more]
CFI2_ARATH2.713e-6261.21Chalcone--flavonone isomerase 2 OS=Arabidopsis tha... [more]
CFI1A_SOYBN5.117e-6155.92Chalcone--flavonone isomerase 1A OS=Glycine max GN... [more]
CFI_PHAVU1.489e-6054.17Chalcone--flavonone isomerase OS=Phaseolus vulgari... [more]
CFI1_LOTJA1.944e-6054.98Chalcone--flavonone isomerase 1 OS=Lotus japonicus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003E01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884442 ID=CV884442; Name=CV884442; organism=Citrus sinensis; type=EST; length=811bp
AGGCAAACAACTGAGAGTCCATAGGAAAGGACACTAATTTAACATTAAAG
AAAAAAAAGTTTGCCAATTTAACAACTCTGCCTTCGCTTATTATTTGGCA
AACTTTTCAACTTCTTCATTTCATCTTATCACTAGTTACATTCAACAGTG
CTGATATTCTTTCAGCCAAACTCTTCTTTGCTGCAGGAGAAACACCATTC
TTGCCGATCATCGACTCCAGTACTGCCTCAGAAAGCAGATTATTCTCTAT
TACCGCAACACCATCTTTCGGTATTGAACCGTCTTTGGAGAAGCTGATAG
TCAATGATCCTGATGATTGAGTAAAGAGAATTGAGGATCCTGGTGGGAAA
ATTTCATCCTTGAAGACCGCAGTGAATTTTTCAATAGCTTTGGCTTCAGC
ATCTGTGTAAATTCCAAAAAACTTCCATATGGCCATGCAATTTTCGGCAA
CCTTCTCTGAGTATTGTGCACCAGTTAATGGCAAGATCATTGTCACCTTC
ATGAATTTCTCAAAGGGACCTGTGACGACGTCTCTGAAGAACTCAACGGA
TTCCGTCAACTCCTCCGCAGTCTTCCCCTTCCATTTGCCGGCGAGTAACG
GCACGGCGTTCTCCTCCAAGTACACTCCTATCGCCGTGAACTTCACGAAC
TTCCCTTCAATCTCCAATCCTCTCTCCCCTGCGCCGCCGAGGAAATGCGA
CTTTGTTGATCCTGGAGGTTGCAGGGACGGCGTGAAAGTGACGTTCTCGA
CCTGCAGTTCGGTGACGGACGGTGAGGGATTCATCGGTGACAGCCTTTTT
GATTAATTTCA
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