CV884442

Overview
NameCV884442
Unique NameCV884442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1057 contig Csv1_Contig1057:42..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI_PUELO (Chalcone--flavonone isomerase OS=Pueraria lobata GN=CHI PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 8.169e-59
Identity = 114/211 (54.03%), Postives = 157/211 (74.41%), Query Frame = -1
Query:  140 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 769
            +++ +QVE + F   +  P S +++FLGGAGERGL IEGKF+KFT IGVYLE+ AV  LA KWKGK +EEL E+++F+RD+++GPFEK ++ + ILPL+G +YS+KV ENC+A  K  G Y DAEA AIEKF   FK+  F PG+++ + QS  G L +SFS+D +IP +  AVIEN  +S AVLE+MIG++ VSP  K+SLA R+ A+L+
Sbjct:    9 TISAVQVEFLEFPAVVTSPASGRTYFLGGAGERGLTIEGKFIKFTGIGVYLEDKAVSSLAAKWKGKPSEELVETLDFYRDIISGPFEKLIRGSKILPLSGVEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFQPGATVFYRQSPDGVLGLSFSEDVTIPDNEAAVIENKAVSAAVLETMIGEHAVSPDLKRSLASRLPAVLS 219          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI3_LOTJA (Chalcone--flavonone isomerase 3 OS=Lotus japonicus GN=CHI3 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.393e-58
Identity = 112/210 (53.33%), Postives = 153/210 (72.86%), Query Frame = -1
Query:  140 VTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 766
            +T +QVEN+ F  S+  P + KS+FLGGAGERGL IEGKF+KFT +GVYLE+  V  LA KWKGK+++EL +S++F+RD+++ P EK ++ + + PL+G +YS KV ENC+A  K  G Y +AEA AI KF   F++  FPPGSS+ + QS  G L +SFS D ++P+    VIEN  LSEAVLE+MIG++ VSP  K+ LAER+ A+LN
Sbjct:    8 LTPIQVENLQFPASITSPATAKSYFLGGAGERGLTIEGKFIKFTGLGVYLEDKTVDSLATKWKGKSSQELLDSLDFYRDIISSPSEKLIRGSKLRPLSGVEYSRKVMENCVAHMKSTGTYGEAEAAAIGKFAEAFRNLDFPPGSSVFYRQSPDGELGLSFSPDDTLPEKEAVVIENKALSEAVLETMIGEHAVSPDLKRCLAERLPAVLN 217          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI1_MEDSA (Chalcone--flavonone isomerase 1 OS=Medicago sativa GN=CHI1 PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.104e-58
Identity = 115/211 (54.50%), Postives = 154/211 (72.99%), Query Frame = -1
Query:  140 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 769
            S+T + VEN+ +   +  P + KS+FLGGAGERGL IEG F+KFTAIGVYLE+ AV  LA KWKGK++EEL E+++F+RD+++GPFEK ++ + I  L+G +YS KV ENC+A  K  G Y DAEA+A++KF   FK   FPPG+S+ + QS  G L +SFS D SIP+   A+IEN  +S AVLE+MIG++ VSP  K+ LA R+ ALLN
Sbjct:    4 SITAITVENLEYPAVVTSPVTGKSYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKSSEELLETLDFYRDIISGPFEKLIRGSKIRELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFKPVNFPPGASVFYRQSPDGILGLSFSPDTSIPEKEAALIENKAVSSAVLETMIGEHAVSPDLKRCLAARLPALLN 214          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CF1B1_SOYBN (Chalcone--flavonone isomerase 1B-1 OS=Glycine max GN=CHI1B1 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.628e-57
Identity = 114/205 (55.61%), Postives = 152/205 (74.15%), Query Frame = -1
Query:  158 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAER 769
            S+T + VE + F   + PPGSTKS+FLGGAG RGL I+ +FVKFT IGVYLE+ AV  LA KWKGK+A EL +S++F+RD++ GPFEK ++ + +  L G +Y  KV+ENC+A  +  G Y+D E KAIE+F   FKD+ FPPGS++ + QS +G+L +SFSKD +IP+   AVI+N  LSEAVLE+MIG+  VSPA K+SLA R
Sbjct:    6 SITNVTVEFLQFPALVTPPGSTKSYFLGGAGVRGLNIQEEFVKFTGIGVYLEDKAVSSLAAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMQSVGTYSDEEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGLSFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLATR 210          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CF1B2_SOYBN (Chalcone--flavonone isomerase 1B-2 OS=Glycine max GN=CHI1B2 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.905e-56
Identity = 112/205 (54.63%), Postives = 151/205 (73.66%), Query Frame = -1
Query:  158 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAER 769
            S+T + VE + F   + PP STKS+FLGGAG RGL I+ +FVKFT IGVYLE+ AV  L  KWKGK+A EL +S++F+RD++ GPFEK ++ + +  L G +Y  KV+ENC+A  +  G Y++AE KAIE+F   FKD+ FPPGS++ + QS +G+L +SFSKD +IP+   AVI+N  LSEAVLE+MIG+  VSPA K+SLA R
Sbjct:    6 SITNVTVEFLQFPALVTPPASTKSYFLGGAGVRGLNIQEEFVKFTGIGVYLEDKAVSSLGAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMESVGTYSEAEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGLSFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLATR 210          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI2B_SOYBN (Chalcone--flavonone isomerase 2-B OS=Glycine max GN=CHI2-B PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.460e-55
Identity = 113/206 (54.85%), Postives = 151/206 (73.30%), Query Frame = -1
Query:  158 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSL-TISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAER 769
            S+T + VE + F   + PPGSTKS+FLGGAG RGL I+ +FVKFT IGVYLE+ AV  LA KWKGK+A EL +S++F+RD++ GPFEK ++ + +  L G +Y  KV+ENC+A  +  G Y+D E KAIE+F   FKD+ FPPGS++ + QS +G+L  + FSKD +IP+   AVI+N  LSEAVLE+MIG+  VSPA K+SLA R
Sbjct:    6 SITNVTVEFLQFPALVTPPGSTKSYFLGGAGVRGLNIQEEFVKFTGIGVYLEDKAVSSLAAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMQSVGTYSDEEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGQLIFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLATR 211          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI2_MEDSA (Chalcone--flavonone isomerase 2 (Fragment) OS=Medicago sativa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.479e-55
Identity = 109/189 (57.67%), Postives = 142/189 (75.13%), Query Frame = -1
Query:  140 KSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 703
            KS+FLGGAGERGL IEG F+KFTAIGVYLE+ AV  LA KWKGK++EEL E+++F+RD+++GPFEK ++ + I  L+G +YS KV ENC+A  K  G Y DAEA+A++KF   FK   FPPG+S+ + QS  G L +SFS D SIP+   A+IEN  +S AVLE+MIG++ VSP  K+ LA R+ ALLN
Sbjct:    1 KSYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKSSEELLETLDFYRDIISGPFEKLIRGSKIRELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFKPVNFPPGASVFYRQSPDGILGLSFSPDTSIPEKEAALIENKAVSSAVLETMIGEHAVSPDLKRCLAARLPALLN 189          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI1_SOYBN (Chalcone--flavonone isomerase 1 (Fragment) OS=Glycine max GN=CHI1 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.684e-44
Identity = 91/163 (55.83%), Postives = 118/163 (72.39%), Query Frame = -1
Query:  155 FTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERI 640
            +T IGVYLE+ AVP LA KWKGKT+EEL  ++ F+RD+++GPFEK ++ + ILPL GA+YS+KV ENC+A  K  G Y DAEA AIEKF   FK+  F PG   L+ QS  G L +SFS+D +IP+   AVIEN  +S AVLE+MIG++ VSP  K+ LA R+
Sbjct:    1 YTGIGVYLEDKAVPSLAAKWKGKTSEELVHTLHFYRDIISGPFEKLIRGSKILPLAGAEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFAPGPLFLYRQSPDGILGLSFSEDVTIPEKEAAVIENKAVSAAVLETMIGEHAVSPDLKRILASRL 163          
BLAST of CV884442 vs. ExPASy Swiss-Prot
Match: CFI_PEA (Chalcone--flavonone isomerase OS=Pisum sativum GN=CHI PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.448e-41
Identity = 98/202 (48.51%), Postives = 133/202 (65.84%), Query Frame = -1
Query:  140 PSLQPPGSTKSH-FLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS----SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 730
            P++     T++H FLGGAGERGL I G F+KFT IGVYLE+ A   LA KW+GK  EEL E+++F+RD+++GPFEK ++ + I  L+G +YS KV ENC+A  K  G Y DAE +AI+    + +  IF     +L  ++     G L +S SKD SIP+   A+IEN   S AVLE+MIG++ VSP  K+ LA R+ ALLN
Sbjct:   18 PAVVTSPVTENHIFLGGAGERGLTINGTFIKFTCIGVYLEDKADKSLATKWEGKL-EELLETLDFYRDIISGPFEKLIRRSKIKELSGPEYSRKVMENCVAHLKSVGTYGDAEVEAIQNLQKLSRMLIF---HLVLLKKNRQSPDGILGLSSSKDISIPEKEDAIIENKAASSAVLETMIGEHAVSPDLKRCLAARLPALLN 215          
The following BLAST results are available for this feature:
BLAST of CV884442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_PUELO8.169e-5954.03Chalcone--flavonone isomerase OS=Pueraria lobata G... [more]
CFI3_LOTJA1.393e-5853.33Chalcone--flavonone isomerase 3 OS=Lotus japonicus... [more]
CFI1_MEDSA3.104e-5854.50Chalcone--flavonone isomerase 1 OS=Medicago sativa... [more]
CF1B1_SOYBN2.628e-5755.61Chalcone--flavonone isomerase 1B-1 OS=Glycine max ... [more]
CF1B2_SOYBN2.905e-5654.63Chalcone--flavonone isomerase 1B-2 OS=Glycine max ... [more]
CFI2B_SOYBN2.460e-5554.85Chalcone--flavonone isomerase 2-B OS=Glycine max G... [more]
CFI2_MEDSA5.479e-5557.67Chalcone--flavonone isomerase 2 (Fragment) OS=Medi... [more]
CFI1_SOYBN5.684e-4455.83Chalcone--flavonone isomerase 1 (Fragment) OS=Glyc... [more]
CFI_PEA3.448e-4148.51Chalcone--flavonone isomerase OS=Pisum sativum GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003E01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884442 ID=CV884442; Name=CV884442; organism=Citrus sinensis; type=EST; length=811bp
AGGCAAACAACTGAGAGTCCATAGGAAAGGACACTAATTTAACATTAAAG
AAAAAAAAGTTTGCCAATTTAACAACTCTGCCTTCGCTTATTATTTGGCA
AACTTTTCAACTTCTTCATTTCATCTTATCACTAGTTACATTCAACAGTG
CTGATATTCTTTCAGCCAAACTCTTCTTTGCTGCAGGAGAAACACCATTC
TTGCCGATCATCGACTCCAGTACTGCCTCAGAAAGCAGATTATTCTCTAT
TACCGCAACACCATCTTTCGGTATTGAACCGTCTTTGGAGAAGCTGATAG
TCAATGATCCTGATGATTGAGTAAAGAGAATTGAGGATCCTGGTGGGAAA
ATTTCATCCTTGAAGACCGCAGTGAATTTTTCAATAGCTTTGGCTTCAGC
ATCTGTGTAAATTCCAAAAAACTTCCATATGGCCATGCAATTTTCGGCAA
CCTTCTCTGAGTATTGTGCACCAGTTAATGGCAAGATCATTGTCACCTTC
ATGAATTTCTCAAAGGGACCTGTGACGACGTCTCTGAAGAACTCAACGGA
TTCCGTCAACTCCTCCGCAGTCTTCCCCTTCCATTTGCCGGCGAGTAACG
GCACGGCGTTCTCCTCCAAGTACACTCCTATCGCCGTGAACTTCACGAAC
TTCCCTTCAATCTCCAATCCTCTCTCCCCTGCGCCGCCGAGGAAATGCGA
CTTTGTTGATCCTGGAGGTTGCAGGGACGGCGTGAAAGTGACGTTCTCGA
CCTGCAGTTCGGTGACGGACGGTGAGGGATTCATCGGTGACAGCCTTTTT
GATTAATTTCA
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