CV884437
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884437 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.779e-12 Identity = 32/56 (57.14%), Postives = 42/56 (75.00%), Query Frame = 1 Query: 1 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTP 168 G SQAD A+L++ + G FEAG+S +GQTREH +LA T+G+ Q+I NKMDAT P Sbjct: 105 GASQADAAILVVSARRGEFEAGMSAEGQTREHLILAKTMGIDQLIVAVNKMDATEP 160
BLAST of CV884437 vs. ExPASy Swiss-Prot
Match: EF1A_SULTO (Elongation factor 1-alpha OS=Sulfolobus tokodaii GN=tuf PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.506e-11 Identity = 30/56 (53.57%), Postives = 41/56 (73.21%), Query Frame = 1 Query: 1 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTP 168 G SQAD A+L++ + G +EAG+S +GQTREH +LA T+G+ Q+I NKMD T P Sbjct: 104 GASQADAAILVVSAKKGEYEAGMSAEGQTREHIILAKTMGINQVIVAVNKMDLTDP 159
BLAST of CV884437 vs. ExPASy Swiss-Prot
Match: EF1A_AERPE (Elongation factor 1-alpha OS=Aeropyrum pernix GN=tuf PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.506e-11 Identity = 31/53 (58.49%), Postives = 41/53 (77.36%), Query Frame = 1 Query: 1 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 159 G SQAD A+L++ + G FEAG+S +GQTREH LLA T+G++Q+I NKMDA Sbjct: 104 GASQADAAILVVSARKGEFEAGMSTEGQTREHLLLARTMGIEQIIVAVNKMDA 156
BLAST of CV884437 vs. ExPASy Swiss-Prot
Match: EF1A2_EUPCR (Elongation factor 1-alpha 2 OS=Euplotes crassus GN=EFA2 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.506e-11 Identity = 32/52 (61.54%), Postives = 40/52 (76.92%), Query Frame = 1 Query: 1 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 156 GTSQAD AVLII + G FE G S++G T++HALLA+T+G+KQ I NKMD Sbjct: 106 GTSQADAAVLIIAAKKGEFEDGFSREGSTKDHALLAYTMGIKQAIVAINKMD 157
BLAST of CV884437 vs. ExPASy Swiss-Prot
Match: EF1A_SULSO (Elongation factor 1-alpha OS=Sulfolobus solfataricus GN=tuf PE=1 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 3.355e-11 Identity = 30/56 (53.57%), Postives = 41/56 (73.21%), Query Frame = 1 Query: 1 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTP 168 G SQAD A+L++ + G +EAG+S +GQTREH +LA T+G+ Q+I NKMD T P Sbjct: 104 GASQADAAILVVSAKKGEYEAGMSVEGQTREHIILAKTMGLDQLIVAVNKMDLTEP 159
BLAST of CV884437 vs. ExPASy Swiss-Prot
Match: EF1A_CRYPV (Elongation factor 1-alpha OS=Cryptosporidium parvum PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.473e-11 Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = 1 Query: 1 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 156 GTSQAD A+L++ + FE SK+GQTREHALLAFTLGV+QMI NKMD Sbjct: 105 GTSQADVALLVVPADR--FEGAFSKEGQTREHALLAFTLGVRQMIVGINKMD 154
BLAST of CV884437 vs. ExPASy Swiss-Prot
Match: ERF3B_PONAB (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Pongo abelii GN=GSPT2 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.761e-11 Identity = 33/55 (60.00%), Postives = 37/55 (67.27%), Query Frame = 1 Query: 1 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 165 G SQAD AVL+I + G FE G K GQTREHA+LA T GVK +I NKMD T Sbjct: 301 GASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPT 355
BLAST of CV884437 vs. ExPASy Swiss-Prot
Match: ERF3B_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Homo sapiens GN=GSPT2 PE=1 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 9.761e-11 Identity = 33/55 (60.00%), Postives = 37/55 (67.27%), Query Frame = 1 Query: 1 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 165 G SQAD AVL+I + G FE G K GQTREHA+LA T GVK +I NKMD T Sbjct: 301 GASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPT 355
BLAST of CV884437 vs. ExPASy Swiss-Prot
Match: ERF3A_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus GN=Gspt1 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.761e-11 Identity = 33/55 (60.00%), Postives = 37/55 (67.27%), Query Frame = 1 Query: 1 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 165 G SQAD AVL+I + G FE G K GQTREHA+LA T GVK +I NKMD T Sbjct: 172 GASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPT 226
BLAST of CV884437 vs. ExPASy Swiss-Prot
Match: ERF3A_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Homo sapiens GN=GSPT1 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.761e-11 Identity = 33/55 (60.00%), Postives = 37/55 (67.27%), Query Frame = 1 Query: 1 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 165 G SQAD AVL+I + G FE G K GQTREHA+LA T GVK +I NKMD T Sbjct: 172 GASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPT 226 The following BLAST results are available for this feature:
BLAST of CV884437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884437 ID=CV884437; Name=CV884437; organism=Citrus sinensis; type=EST; length=170bpback to top |