EY665274

Overview
NameEY665274
Unique NameEY665274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1084
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_ECOSE (Malate dehydrogenase OS=Escherichia coli (strain SE11) GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE-DATPALEGADVVLISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_ECOLI (Malate dehydrogenase OS=Escherichia coli (strain K12) GN=mdh PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE-DATPALEGADVVLISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_ECOL6 (Malate dehydrogenase OS=Escherichia coli O6 GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE-DATPALEGADVVLISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_ECOL5 (Malate dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE-DATPALEGADVVLISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_ECOK1 (Malate dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE-DATPALEGADVVLISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_ECOHS (Malate dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE-DATPALEGADVVLISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_ECODH (Malate dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE-DATPALEGADVVLISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_ECOBW (Malate dehydrogenase OS=Escherichia coli (strain K12 / BW2952) GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE-DATPALEGADVVLISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_ECO8A (Malate dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE-DATPALEGADVVLISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_ECO81 (Malate dehydrogenase OS=Escherichia coli O81 (strain ED1a) GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE-DATPALEGADVVLISAGVARKPGMDRSDLF 91
The following BLAST results are available for this feature:
BLAST of EY665274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
MDH_ECOSE6.799e-1247.25Malate dehydrogenase OS=Escherichia coli (strain S... [more]
MDH_ECOLI6.799e-1247.25Malate dehydrogenase OS=Escherichia coli (strain K... [more]
MDH_ECOL66.799e-1247.25Malate dehydrogenase OS=Escherichia coli O6 GN=mdh... [more]
MDH_ECOL56.799e-1247.25Malate dehydrogenase OS=Escherichia coli O6:K15:H3... [more]
MDH_ECOK16.799e-1247.25Malate dehydrogenase OS=Escherichia coli O1:K1 / A... [more]
MDH_ECOHS6.799e-1247.25Malate dehydrogenase OS=Escherichia coli O9:H4 (st... [more]
MDH_ECODH6.799e-1247.25Malate dehydrogenase OS=Escherichia coli (strain K... [more]
MDH_ECOBW6.799e-1247.25Malate dehydrogenase OS=Escherichia coli (strain K... [more]
MDH_ECO8A6.799e-1247.25Malate dehydrogenase OS=Escherichia coli O8 (strai... [more]
MDH_ECO816.799e-1247.25Malate dehydrogenase OS=Escherichia coli O81 (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-A09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665274 ID=EY665274; Name=EY665274; organism=Citrus sinensis; type=EST; length=1084bp
ATTTTTATATTCTAATTCAATCCATTCATTCTTTGCATGTATCATTATTG
ATCACATTCACACCACCATACTTCAACAAAGAAAATGGAGTTTAGCTCAG
AGGCTAATCAGCGCATTGCTAGAATCTCTGCTCATCTTTACCCTCCAAAT
CTCCAGATGGAGGAGAATTCTTGCTTGAGGCAAGCTAAATGCCGGGCAAA
AGGCGGGGCAGCTGGATTCAAAGTAGCCATCTTGGGTGCTGCTGGAGGCA
TTGGTCAACCCCTTGCAATGCTAATGAAGATAAACCCCCTGGTCTCAGTC
CTTCACCTCTATGATGTTGTCAATACCCCTGGTGTCACTGCTGATATTAG
CCATATGGACACCGGCGCTGTGGTACGGGGTTTCCTAGGCCAGCCACAGC
TTGAGAATGCTCTCACAGGGGTGGACCTTGTCATTATCCCTGCCCGGCGT
TCCGAGGAACCCTGGAATGACCAGGGAAGATCTTTTCAAAATCAATGCTG
GAATGGCCGGGACACTCTGTGAAGGGATCGCAAAGTGTGGCCCCAATGCG
ACTGTCAATTTGATCAGTAATCCAGGGAACTCCAAAGTTCCTTATGGCCG
CAAAGGTTTTCAAAAAAGCGGGGACTTTATGAACCAAAAAACTCCTGGGG
GAGTACAATGGGTCCAAGGCGAAAAACCCCACACATTTCGGGGGGAAAAT
TTTGGGGAACTTGGTTCCCTAGGGATGTTGGGGGTCCCGGTTTGGGGGGG
GCCATGGGGGGGAAAAAAATTTTTGGCCCCTTTTTTAAAAGAGGGTAAAA
ACCCTCCTTTGAAATTTTCTTTAAAAAAAAAAAAAAGGAAAAAACACGGA
GAAAAACCCCCCAACAAAAAAAGGGGGGGGGAAAAAAAAAAATTGTGTGG
GAAGAGGGAAAAAAAGGGGGGGGGGGGGGGGGGGGTCTGCCCCGGACACA
CCCCTTACCCCCAAATGGGGGAATTATAATGAAGGAGCCGCGACGTGGTT
TATTAAATAAATTTTTTTTTTTTGGGAAGGAGGAGAGAAACGAATGAGTA
GAGCCTCTGCCAGCGCTACCCCCTCCTCCCCTCC
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