CV884375

Overview
NameCV884375
Unique NameCV884375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: YNE5_CAEEL (Uncharacterized calcium-binding protein R08D7.5 OS=Caenorhabditis elegans GN=R08D7.5 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.708e-12
Identity = 44/130 (33.85%), Postives = 70/130 (53.85%), Query Frame = -3
Query:  378 ELGTVMRSLGQNPTEAELQDMINEVDADGNGTI----------DFPEFLNLMARKMKDTDSEE-----ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 722
            +L  V+R+LG +P  +++Q+M  ++  DG   +          D  E  N +  K  + DS E     E++ AF++FD +  G I+ A L+ V   LGE L D + DEMIREA  D +  IN ++F ++M
Sbjct:   14 QLKMVLRALGYDPRNSKVQEMTRKIK-DGRSMVMGWHGEKDYMDVDELWNALQSKDDEGDSTEDKVTTEMRSAFKLFDPESKGTITVANLKMVAKELGETLADADFDEMIREAGGDNNTGINEQQFFEIM 142          
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: CDPK4_PLAYO (Calcium-dependent protein kinase 4 OS=Plasmodium yoelii yoelii GN=CPK4 PE=3 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.708e-12
Identity = 49/148 (33.11%), Postives = 79/148 (53.38%), Query Frame = -3
Query:  390 TDDQISEFKEAFSLFDKDGDGCITTKEL-----------GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 800
            T D+  E  + F   DK+GDG +   EL           G     L     E E+  +++ +D D NG I++ EFL  +A   K   S E L++AF++FDKD +G ISA EL  +   LG+ ++ +    +++E D + DG+I+++EF
Sbjct:  374 TIDETKELTKIFKKMDKNGDGQLDRNELIIGYKELLKLKGDDTTDLDNAAIEVEVDQILSSIDLDQNGYIEYSEFLT-VAIDRKLLLSTERLEKAFKLFDKDGSGKISANELAQLF-GLGD-VSSDCWKTVLKEVDQNNDGEIDFKEF 518          
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: CDPK4_PLABA (Calcium-dependent protein kinase 4 OS=Plasmodium berghei (strain Anka) GN=CPK4 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.708e-12
Identity = 49/148 (33.11%), Postives = 79/148 (53.38%), Query Frame = -3
Query:  390 TDDQISEFKEAFSLFDKDGDGCITTKEL-----------GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 800
            T D+  E  + F   DK+GDG +   EL           G     L     E E+  +++ +D D NG I++ EFL  +A   K   S E L++AF++FDKD +G ISA EL  +   LG+ ++ +    +++E D + DG+I+++EF
Sbjct:  374 TIDETKELTKIFKKMDKNGDGQLDRNELIIGYKELLKLKGDDTTDLDNAAIEVEVDQILSSIDLDQNGYIEYSEFLT-VAIDRKLLLSTERLEKAFKLFDKDGSGKISANELAQLF-GLGD-VSSDCWKTVLKEVDQNNDGEIDFKEF 518          
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: CDPK4_PLAF7 (Calcium-dependent protein kinase 4 OS=Plasmodium falciparum (isolate 3D7) GN=CPK4 PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12
Identity = 49/148 (33.11%), Postives = 78/148 (52.70%), Query Frame = -3
Query:  390 TDDQISEFKEAFSLFDKDGDGCITTKEL-----------GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 800
            T D+  E  + F   DK+GDG +   EL           G     L     E E+  ++N +D D NG I++ EFL +   + K   S E L++AF++FDKD +G ISA EL  +   L + ++ E    +++E D + DG+I+++EF
Sbjct:  374 TIDETKELTKIFKKMDKNGDGQLDRNELIIGYKELLKLKGEDTSDLDNAAIEYEVDQILNSIDLDQNGYIEYSEFLTVSIDR-KLLLSTERLEKAFKLFDKDGSGKISANELAQLF-GLSD-VSSECWKTVLKEVDQNNDGEIDFKEF 518          
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAYO (Calcium-dependent protein kinase 1 OS=Plasmodium yoelii yoelii GN=CPK1 PE=3 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 4.619e-12
Identity = 53/163 (32.52%), Postives = 89/163 (54.60%), Query Frame = -3
Query:  378 TDDQISEFKEAFSLFDKDGDGCITTKEL---GTVMRS----LGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHV--------------MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 800
            T ++  E  + F   DK+GDG +  KEL     V+R+    LG+    E E+ +++ EVD D NG I++ EF+++   K +   SEE L+ AF +FD D++G I+  EL +V              +T++ EK      ++++ EAD + D  I+++EFV +M
Sbjct:  369 TLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDK-QILFSEERLRRAFNLFDTDKSGKITKEELANVIIRGFYFFTYSLFGLTSVSEKTW----NDVLGEADQNKDNMIDFDEFVSMM 526          
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: MLRT_RABIT (Myosin regulatory light chain 2, skeletal muscle isoform type 1 OS=Oryctolagus cuniculus PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.879e-12
Identity = 42/139 (30.22%), Postives = 70/139 (50.36%), Query Frame = -3
Query:  378 QISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 791
            QI EFKEAF++ D++ DG I  ++L     ++G+ N    EL  M+ E     +G I+F  FL +   K+K  D E+ +  AF+V D +  G I    L  ++    ++ + EE+  M      D  G ++Y+    V+
Sbjct:   27 QIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAMGRLNVKNEELDAMMKEA----SGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKQFLEELLITQCDRFSQEEIKNMWAAFSPDVGGNVDYKNICYVI 161          
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: SCMC1_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.029e-11
Identity = 36/136 (26.47%), Postives = 73/136 (53.68%), Query Frame = -3
Query:  390 DDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 797
            +D    F E F   D + DG +   EL T + ++G +  + E Q ++   D D +  +DF EF   +       + E++L+  F+  DK+++G + A E++  + +LG  L+D++ ++++   DVDG   +++ E+
Sbjct:   19 EDNTKSFAELFEKLDVNKDGKVDVSELKTGLAAMGFSMGKGEAQKIVTSGDTDKDEGLDFEEFSKYLK------EHEKKLRLTFKSLDKNEDGRVDAKEIQQSLKDLGINLSDKDAEKILHSIDVDGTMTLDWNEW 148          
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: EFH51_TRYCR (EF-hand protein 5 variant 1 OS=Trypanosoma cruzi PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.755e-11
Identity = 39/126 (30.95%), Postives = 75/126 (59.52%), Query Frame = -3
Query:  369 ITTKELGTVMRSLGQNPTEAELQD---MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD-GDGQINYEEFVKVMMAK 734
            I +K++  +M+++G + TE E  D   +I + +      + F +FL LM R++ DT ++E L+ AF  +DK + G+++  +   +   LGE+ T EE++E++  A+VD  D +I+Y  FV  + ++
Sbjct:   80 IPSKDVYALMQNVGMHLTEEEFHDALRVIGQSEPQNADELSFSDFLLLMTREVDDTMADE-LRSAFFHYDKYKTGYVTRKQFTELFATLGERSTPEELEELLAVAEVDETDDKIDYNRFVNELTSR 204          
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: CDPK1_ORYSJ (Calcium-dependent protein kinase isoform 1 OS=Oryza sativa subsp. japonica GN=SPK PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.755e-11
Identity = 46/147 (31.29%), Postives = 77/147 (52.38%), Query Frame = -3
Query:  372 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 812
            A++L++++I   +E F   D      +T  EL  + R       + E+ D++   D D   TI++ EF+   A  +   + E+ L  AF  FDKD +GFI+  +L+     +   + D  ++EMI E D + DGQI+Y EFV +M +
Sbjct:  368 AERLSEEEIVGLREMFKAMDTKNRSVVTFGELKGLKR-YSSVFKDTEINDLMEAAD-DTTSTINWEEFI-AAAVSLNKIEREKHLMAAFTYFDKDGSGFITVDKLQKAC--MERNMEDTFLEEMILEVDQNNDGQIDYAEFVTMMQS 509          
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: EFCB2_HUMAN (EF-hand calcium-binding domain-containing protein 2 OS=Homo sapiens GN=EFCAB2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.910e-11
Identity = 40/105 (38.10%), Postives = 60/105 (57.14%), Query Frame = -3
Query:  483 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEV-DADGNGTIDFPEFLNLMARKMKDTD----SEEELKEAFRVFDKDQNGFISAAELRHVMT 782
            + KEAF +FD + +  +  +E+GT++RSLG  PTE EL D+I EV + +  G I F +FL +M   + +       E+ L  AF V D  + GF++  EL   MT
Sbjct:  154 KIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMT 258          
The following BLAST results are available for this feature:
BLAST of CV884375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 477
Match NameE-valueIdentityDescription
YNE5_CAEEL2.708e-1233.85Uncharacterized calcium-binding protein R08D7.5 OS... [more]
CDPK4_PLAYO2.708e-1233.11Calcium-dependent protein kinase 4 OS=Plasmodium y... [more]
CDPK4_PLABA2.708e-1233.11Calcium-dependent protein kinase 4 OS=Plasmodium b... [more]
CDPK4_PLAF73.537e-1233.11Calcium-dependent protein kinase 4 OS=Plasmodium f... [more]
CDPK1_PLAYO4.619e-1232.52Calcium-dependent protein kinase 1 OS=Plasmodium y... [more]
MLRT_RABIT7.879e-1230.22Myosin regulatory light chain 2, skeletal muscle i... [more]
SCMC1_DANRE1.029e-1126.47Calcium-binding mitochondrial carrier protein SCaM... [more]
EFH51_TRYCR1.755e-1130.95EF-hand protein 5 variant 1 OS=Trypanosoma cruzi P... [more]
CDPK1_ORYSJ1.755e-1131.29Calcium-dependent protein kinase isoform 1 OS=Oryz... [more]
EFCB2_HUMAN3.910e-1138.10EF-hand calcium-binding domain-containing protein ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003A07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884375 ID=CV884375; Name=CV884375; organism=Citrus sinensis; type=EST; length=838bp
TTTTTTTTTTTTTTTTTAAACCTAAGCTGATAGCCTGATACATAAAATAG
GATACATATTTCGACCAAAAGAAAAATAAACATCGCAAGGGCAGAAATTA
ATGAAACACATTAAACAGACAACAACATTCATAGAACAGCAGAACAACTA
AAATAATAAAAACCGAAAAGTTTTGCGAGTCACAAGACATATTGACGAGG
GAGACAACATTCTTCCTACACCATCAGGCCCATCACCATTAAAAGACCAT
TGCTTCCTTTAGCCTGACCCTCATGACTATCAAATTAAAAATTGTAAAAG
AGAAAACTAGGAATCCCTTTATAATTTAGTCAACCCATTTTATAAGTATT
GGTGGGTTGGGGTCATTACTTGGCCATCATAACCTTGACAAATTCCTCAT
AATTTATCTGGCCATCACCATCAACATCAGCTTCCCTTATCATCTCATCA
ACTTCTTCATCAGTAAGTTTCTCTCCTAGGTTTGTCATCACATGGCGCAG
CTCAGCAGCTGAGATGAAACCATTCTGATCCTTGTCGAAAACCCGGAAGG
CCTCTTTCAGCTCCTCCTCAGAGTCGGTATCCTTCATCTTCCTGGCCATG
AGGTTTAGGAATTCAGGAAAATCAATAGTTCCATTACCATCAGCATCCAC
TTCATTGATCATGTCCTGGAGCTCAGCCTCAGTGGGGTTCTGACCCAGTG
ACCTCATAACAGTGCCAAGCTCCTTGGTGGTAATGCAACCGTCGCCATCC
TTGTCAAACAAGCTGAAGGCCTCTTTGAACTCAGAGATCTGATCGTCCGT
GAGCTGATCCGCCCATCAATCCATCTTCTTCTCCCAAA
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