CV884375

Overview
NameCV884375
Unique NameCV884375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: CALM_CIOIN (Calmodulin OS=Ciona intestinalis PE=2 SV=3)

HSP 1 Score: 272.322 bits (695), Expect = 2.329e-72
Identity = 134/148 (90.54%), Postives = 142/148 (95.95%), Query Frame = -3 
Query:  369 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 812
            ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ+NYEEFV +M  K
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVNMMTNK 149
[Close]
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: CALM_CAEEL (Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1 SV=3)

HSP 1 Score: 272.322 bits (695), Expect = 2.329e-72
Identity = 133/148 (89.86%), Postives = 142/148 (95.95%), Query Frame = -3 
Query:  369 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 812
            ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M  K
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTTK 149
[Close]
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: CALM_TRYBG (Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV=2)

HSP 1 Score: 271.937 bits (694), Expect = 3.041e-72
Identity = 134/148 (90.54%), Postives = 144/148 (97.30%), Query Frame = -3 
Query:  369 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 812
            ADQL+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVD DG+GTIDFPEFL LMARKM+D+DSEEE+KEAFRVFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:    2 ADQLSNEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149
[Close]
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: CALM_TRYBB (Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2)

HSP 1 Score: 271.937 bits (694), Expect = 3.041e-72
Identity = 134/148 (90.54%), Postives = 144/148 (97.30%), Query Frame = -3 
Query:  369 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 812
            ADQL+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVD DG+GTIDFPEFL LMARKM+D+DSEEE+KEAFRVFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:    2 ADQLSNEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149
[Close]
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: CALM_PLECO (Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 SV=2)

HSP 1 Score: 271.937 bits (694), Expect = 3.041e-72
Identity = 132/148 (89.19%), Postives = 144/148 (97.30%), Query Frame = -3 
Query:  369 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 812
            ADQL+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKLTD EVDEMIREAD+DGDGQINYEEFVK+M++K
Sbjct:    2 ADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDNEVDEMIREADIDGDGQINYEEFVKMMLSK 149
[Close]
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: CALM_STIJA (Calmodulin OS=Stichopus japonicus PE=1 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 3.972e-72
Identity = 132/148 (89.19%), Postives = 143/148 (96.62%), Query Frame = -3 
Query:  369 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 812
            ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
[Close]
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: CALM_MYXGL (Calmodulin OS=Myxine glutinosa PE=2 SV=3)

HSP 1 Score: 271.552 bits (693), Expect = 3.972e-72
Identity = 132/148 (89.19%), Postives = 144/148 (97.30%), Query Frame = -3 
Query:  369 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 812
            ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEV+ADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVNADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 271.166 bits (692), Expect = 5.188e-72
Identity = 132/148 (89.19%), Postives = 144/148 (97.30%), Query Frame = -3 
Query:  369 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 812
            ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD +GFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149
[Close]
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: CALM_PYUSP (Calmodulin OS=Pyuridae sp. PE=1 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 6.775e-72
Identity = 132/148 (89.19%), Postives = 143/148 (96.62%), Query Frame = -3 
Query:  369 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 812
            ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
[Close]
BLAST of CV884375 vs. ExPASy Swiss-Prot
Match: CALMB_HALRO (Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3)

HSP 1 Score: 270.781 bits (691), Expect = 6.775e-72
Identity = 132/148 (89.19%), Postives = 142/148 (95.95%), Query Frame = -3 
Query:  369 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 812
            ADQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M  K
Sbjct:    2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTCK 149
The following BLAST results are available for this feature:
BLAST of CV884375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 477
Match NameE-valueIdentityDescription
CALM_CIOIN2.329e-7290.54Calmodulin OS=Ciona intestinalis PE=2 SV=3[more]
CALM_CAEEL2.329e-7289.86Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1... [more]
CALM_TRYBG3.041e-7290.54Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV... [more]
CALM_TRYBB3.041e-7290.54Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2[more]
CALM_PLECO3.041e-7289.19Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 S... [more]
CALM_STIJA3.972e-7289.19Calmodulin OS=Stichopus japonicus PE=1 SV=2[more]
CALM_MYXGL3.972e-7289.19Calmodulin OS=Myxine glutinosa PE=2 SV=3[more]
CALM_RENRE5.188e-7289.19Calmodulin OS=Renilla reniformis PE=1 SV=2[more]
CALM_PYUSP6.775e-7289.19Calmodulin OS=Pyuridae sp. PE=1 SV=2[more]
CALMB_HALRO6.775e-7289.19Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_003A07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884375 ID=CV884375; Name=CV884375; organism=Citrus sinensis; type=EST; length=838bp
TTTTTTTTTTTTTTTTTAAACCTAAGCTGATAGCCTGATACATAAAATAG
GATACATATTTCGACCAAAAGAAAAATAAACATCGCAAGGGCAGAAATTA
ATGAAACACATTAAACAGACAACAACATTCATAGAACAGCAGAACAACTA
AAATAATAAAAACCGAAAAGTTTTGCGAGTCACAAGACATATTGACGAGG
GAGACAACATTCTTCCTACACCATCAGGCCCATCACCATTAAAAGACCAT
TGCTTCCTTTAGCCTGACCCTCATGACTATCAAATTAAAAATTGTAAAAG
AGAAAACTAGGAATCCCTTTATAATTTAGTCAACCCATTTTATAAGTATT
GGTGGGTTGGGGTCATTACTTGGCCATCATAACCTTGACAAATTCCTCAT
AATTTATCTGGCCATCACCATCAACATCAGCTTCCCTTATCATCTCATCA
ACTTCTTCATCAGTAAGTTTCTCTCCTAGGTTTGTCATCACATGGCGCAG
CTCAGCAGCTGAGATGAAACCATTCTGATCCTTGTCGAAAACCCGGAAGG
CCTCTTTCAGCTCCTCCTCAGAGTCGGTATCCTTCATCTTCCTGGCCATG
AGGTTTAGGAATTCAGGAAAATCAATAGTTCCATTACCATCAGCATCCAC
TTCATTGATCATGTCCTGGAGCTCAGCCTCAGTGGGGTTCTGACCCAGTG
ACCTCATAACAGTGCCAAGCTCCTTGGTGGTAATGCAACCGTCGCCATCC
TTGTCAAACAAGCTGAAGGCCTCTTTGAACTCAGAGATCTGATCGTCCGT
GAGCTGATCCGCCCATCAATCCATCTTCTTCTCCCAAA
back to top