CV884374

Overview
NameCV884374
Unique NameCV884374
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 4.717e-15
Identity = 48/98 (48.98%), Postives = 59/98 (60.20%), Query Frame = -1
Query:  597 KAVANQ-PVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 869
            KAVA   P+SVAI+ G  +FQ Y+SGI+     +S  LDHGV  VGYG E    N   +WIVKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:  238 KAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKD----QNNHCGIATAASY 331          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.047e-15
Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = -1
Query:  597 PVSVAIEGGGMAFQLYESGIF--TGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 851
            PVSV I+    +FQ Y  G++  TG    +++H V AVGYG + G  +WI+KNSWG+ WG  GY+ + RN+  T    CGIA  AS+
Sbjct:  249 PVSVGIDASLPSFQFYSRGVYYDTGCNPENINHAVLAVGYGAQKGTKHWIIKNSWGTEWGNKGYVLLARNMKQT----CGIANLASF 331          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.047e-15
Identity = 45/93 (48.39%), Postives = 57/93 (61.29%), Query Frame = -1
Query:  597 QPVSVA---IEGGGMAFQLYESGIFTG-RCGTSLD---HGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 854
            +PVSVA   I+G    F+ Y+SG++T   CGT+ D   H V AVGYG ENG  YW++KNSWG+ WG+ GY +ME          C IA  ASY
Sbjct:  274 RPVSVAFQVIDG----FRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMG-----KNMCAIATCASY 357          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.051e-14
Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = -1
Query:  597 QPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 854
            +PVSVA E     F+ Y+SG++    CG +   ++H V AVGYG ENG  YW++KNSWG+ WGE GY +ME          CG+A  ASY
Sbjct:  269 RPVSVAFEVV-KGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGVENGTPYWLIKNSWGADWGEDGYFKMEMG-----KNMCGVATCASY 352          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.373e-14
Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = -1
Query:  597 PVSVAIEGGGMAFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 851
            PVSVAI+    +FQ Y  G++    C + +L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  245 PVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 327          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.793e-14
Identity = 46/98 (46.94%), Postives = 58/98 (59.18%), Query Frame = -1
Query:  597 KAVANQ-PVSVAIEGGGMAFQLYESGI-FTGRCGTS-LDHGVTAVGYGTEN----GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 869
            KAVA   P+SVAI+ G  +F  Y+ GI F   C +  +DHGV  VGYG E+     + YW+VKNSWG  WG  GYI+M ++        CGIA  ASY
Sbjct:  237 KAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKD----RRNHCGIASAASY 330          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.793e-14
Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = -1
Query:  597 PVSVAIEGGGMAFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 851
            PVSVAI+    +FQ Y  G++    C + +++H V AVGYG + G  +WI+KNSWG SWG  GYI M RN        CGIA  AS+
Sbjct:  244 PVSVAIDASLTSFQFYSKGVYYDENCSSDNVNHAVLAVGYGIQKGNKHWIIKNSWGESWGNKGYILMARN----KNNACGIANLASF 326          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.793e-14
Identity = 41/87 (47.13%), Postives = 51/87 (58.62%), Query Frame = -1
Query:  597 PVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 851
            PVSVAI+    +FQ Y  G++      S  L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  244 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 326          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.793e-14
Identity = 41/87 (47.13%), Postives = 51/87 (58.62%), Query Frame = -1
Query:  597 PVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 851
            PVSVAI+    +FQ Y  G++      S  L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  244 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 326          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.793e-14
Identity = 41/87 (47.13%), Postives = 51/87 (58.62%), Query Frame = -1
Query:  597 PVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 851
            PVSVAI+    +FQ Y  G++      S  L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  244 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 326          
The following BLAST results are available for this feature:
BLAST of CV884374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
CATL1_BOVIN4.717e-1548.98Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CATK_CHICK8.047e-1544.83Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
ALEU_HORVU8.047e-1548.39Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CYSP3_SOLLC1.051e-1446.67Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CATK_PIG1.373e-1447.13Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATL1_CERAE1.793e-1446.94Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATK_RABIT1.793e-1447.13Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATK_MACMU1.793e-1447.13Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA1.793e-1447.13Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_HUMAN1.793e-1447.13Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003A07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884374 ID=CV884374; Name=CV884374; organism=Citrus sinensis; type=EST; length=869bp
CCTCGTGCCGATAGATAACAACAATTTGTTTGTGCATTGTTCAGATTCAA
CGCAGATAGATAACTTACAACGCTATATACCAAACCAACGTCCGAATAAA
TATTTAACAGACCATCCACCTGCCGGTACATTAACGTTTGGAATGAAATG
CAGTAGAATGAACTAAGGCCGGGGAGAAACTCATTCACAAGCACGAATAT
TTTCATCCTCCCTTCGGCCTTCCACTGCTCTTACAGTGCCAACTATAATT
AAGCACTGCTACTTCCACCTTGATTTCCATGAGCCCAGTAAGGTTTAGCA
GGGGTGCGTCGTAATGCCCTCACTCCCAATGGGTTGTCCTTGCTCATCAA
GCAGGTCCCAGCACGAACATTACAGATGGGATAGTCATGTGGGCAGCAGC
TATAGTGGTCATCACAGCAGGTGGCAGCCTCAAGCGGGCAGCATCCCCAT
GCAAAGCAAGAGTTACCATACTCAAAGACACAGCAGCAAGTGTTGCTCTC
AGGGCAAGAGTAATAATTGTCACACACAGCAGGAGGCTTTGTTGGAGATG
GAGGGGACGGTCCAGGGTTGGGAGGATTTTGGCCTTTCTTTATGGGATAT
GAGGCCTCCATGGCAATTCCACACTTGCCCGTGAGAGTGCCAGCCACGTT
ACGCTCCATCCTAATATAGCCAGCCTCTCCCCAGCTACTGCCCCATGAAT
TCTTCACAATCCAGTAATCAGCTCCATTTTCTGTGCCATATCCAACAGCA
GTAACACCATGGTCCAGAGATGTCCCACATCTTCCCGTAAATATACCCGA
TTCATATAACTGGAATGCCATGCCACCTCCCTCAATGGCAACACTCACGG
GTTGATTTGCAACTGCCTT
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