CV884374

Overview
NameCV884374
Unique NameCV884374
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.341e-14
Identity = 45/93 (48.39%), Postives = 56/93 (60.22%), Query Frame = -1
Query:  597 AVANQ-PVSVAIEGGGMAFQLYESGIFT-GRCGTSLDHGVTAVGYGTENG-ADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 866
            AVA + PV V I G   +F+ Y+ G+++ G CG   DH V AVGYGT     DYWIVKNSWG+ WG+ GY+ M RN        C IA  AS+
Sbjct:  306 AVAKRGPVVVGISGSKRSFRFYKDGVYSEGNCGRP-DHAVLAVGYGTHPSYGDYWIVKNSWGTDWGKDGYVYMARNRG----NMCHIASAASF 393          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.341e-14
Identity = 40/87 (45.98%), Postives = 53/87 (60.92%), Query Frame = -1
Query:  597 PVSVAIEGGGMAFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 851
            P+SVAI+    +FQ Y  G++    C + +L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  245 PISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 327          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.341e-14
Identity = 40/87 (45.98%), Postives = 53/87 (60.92%), Query Frame = -1
Query:  597 PVSVAIEGGGMAFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 851
            P+SVAI+    +FQ Y  G++    C + +L+H V AVGYG + G  +WI+KNSWG +WG  GYI M RN        CGIA  AS+
Sbjct:  244 PISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARN----KNNACGIANLASF 326          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.216e-14
Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = -1
Query:  615 QLYESGIFTGRCGTSLDHGVTAVGYGT--ENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 812
            +LY  GIFTG+CG  L+H V  VG G   E G  YWI+KNSWG  WGE G++R++R   G    KCGI
Sbjct:  364 KLYSGGIFTGKCGGELNHAVLLVGEGVDHETGMRYWIIKNSWGEDWGENGFLRLQRTKKG--LDKCGI 429          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.216e-14
Identity = 40/87 (45.98%), Postives = 52/87 (59.77%), Query Frame = -1
Query:  597 PVSVAIEGGGMAFQLYESGIF--TGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 851
            P+S  + G  M  + Y  GIF  +   G +L HGV  VGYG ENG  YWI+KN+WG+ WGE+GYIR+ R+        CG+   ASY
Sbjct:  240 PISAVVFGKPM--KSYGGGIFDDSSCLGDNLHHGVNVVGYGIENGQKYWIIKNTWGADWGESGYIRLIRDT----DHSCGVEKMASY 320          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 8.897e-14
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = -1
Query:  615 YESGIFTGRCGTSLDHGVTAVGYGTENGAD--YWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 806
            Y+SG+FTG CG SL+H V  VG G +      YW+V+NSWG+ WGE GY+R+ER   G  T KCG+
Sbjct:  367 YKSGVFTGECGKSLNHAVVLVGEGYDEVTKKRYWVVQNSWGTDWGENGYMRLERTNMG--TDKCGV 430          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 8.897e-14
Identity = 45/98 (45.92%), Postives = 57/98 (58.16%), Query Frame = -1
Query:  597 KAVANQ-PVSVAIEGGGMAFQLYESGI-FTGRCGTS-LDHGVTAVGYGTENGAD----YWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 869
            KAVA   P+SVAI+ G  +F  Y+ GI F   C +  +DHGV  VGYG E+       YW+VKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:  237 KAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKD----RRNHCGIASAASY 330          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.518e-13
Identity = 46/98 (46.94%), Postives = 57/98 (58.16%), Query Frame = -1
Query:  597 KAVANQ-PVSVAIEGGGMAFQLYESGIF-TGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 869
            KAVA   P+SVA++    + Q Y SGI+    C + +LDHGV  VGYG E    N   YW+VKNSWGS WG  GYI+    +A      CG+A  ASY
Sbjct:  237 KAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIK----IAKDRDNHCGLATAASY 330          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.518e-13
Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = -1
Query:  597 PVSVAIEGGGMAFQLYESGIFTGR-CGT-SLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 851
            PVSV+I+    +FQ Y  G++    C   +++H V  VGYGT+ G  YWI+KNSWG SWG  GY+ + RN        CGI   AS+
Sbjct:  244 PVSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGNKYWIIKNSWGESWGNKGYVLLARN----KNNACGITNLASF 326          
BLAST of CV884374 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13
Identity = 36/90 (40.00%), Postives = 56/90 (62.22%), Query Frame = -1
Query:  597 NQPVSVAIEGGGMAFQLYESGIFTG--RCGTSL-DHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 857
            N PV+V ++    +FQLY+ G      +C + + +H VTAVGYG+ +   YWI++NSWG+SWG+AGY  + R+        CGI  +++Y
Sbjct:  216 NGPVAVGMDASRPSFQLYKKGTIYSDTKCRSRMMNHCVTAVGYGSNSNGKYWIIRNSWGTSWGDAGYFLLARD----SNNMCGIGRDSNY 301          
The following BLAST results are available for this feature:
BLAST of CV884374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
CATL_BRUPA2.341e-1448.39Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CATK_CANFA2.341e-1445.98Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATK_BOVIN2.341e-1445.98Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CYSP_THEAN5.216e-1452.94Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]
CATLL_PHACE5.216e-1445.98Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CYSP_THEPA8.897e-1453.03Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
CATL1_HUMAN8.897e-1445.92Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CATL1_MOUSE1.518e-1346.94Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CATK_RAT1.518e-1343.68Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
ACP1_ENTHI2.588e-1340.00Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003A07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884374 ID=CV884374; Name=CV884374; organism=Citrus sinensis; type=EST; length=869bp
CCTCGTGCCGATAGATAACAACAATTTGTTTGTGCATTGTTCAGATTCAA
CGCAGATAGATAACTTACAACGCTATATACCAAACCAACGTCCGAATAAA
TATTTAACAGACCATCCACCTGCCGGTACATTAACGTTTGGAATGAAATG
CAGTAGAATGAACTAAGGCCGGGGAGAAACTCATTCACAAGCACGAATAT
TTTCATCCTCCCTTCGGCCTTCCACTGCTCTTACAGTGCCAACTATAATT
AAGCACTGCTACTTCCACCTTGATTTCCATGAGCCCAGTAAGGTTTAGCA
GGGGTGCGTCGTAATGCCCTCACTCCCAATGGGTTGTCCTTGCTCATCAA
GCAGGTCCCAGCACGAACATTACAGATGGGATAGTCATGTGGGCAGCAGC
TATAGTGGTCATCACAGCAGGTGGCAGCCTCAAGCGGGCAGCATCCCCAT
GCAAAGCAAGAGTTACCATACTCAAAGACACAGCAGCAAGTGTTGCTCTC
AGGGCAAGAGTAATAATTGTCACACACAGCAGGAGGCTTTGTTGGAGATG
GAGGGGACGGTCCAGGGTTGGGAGGATTTTGGCCTTTCTTTATGGGATAT
GAGGCCTCCATGGCAATTCCACACTTGCCCGTGAGAGTGCCAGCCACGTT
ACGCTCCATCCTAATATAGCCAGCCTCTCCCCAGCTACTGCCCCATGAAT
TCTTCACAATCCAGTAATCAGCTCCATTTTCTGTGCCATATCCAACAGCA
GTAACACCATGGTCCAGAGATGTCCCACATCTTCCCGTAAATATACCCGA
TTCATATAACTGGAATGCCATGCCACCTCCCTCAATGGCAACACTCACGG
GTTGATTTGCAACTGCCTT
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