EY665267
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665267 vs. ExPASy Swiss-Prot
Match: MLP3A_HUMAN (Microtubule-associated proteins 1A/1B light chain 3A OS=Homo sapiens GN=MAP1LC3A PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 3.676e-18 Identity = 46/115 (40.00%), Postives = 74/115 (64.35%), Query Frame = 3 Query: 78 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYS-KADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKD-TLPHTATLLDSVYESFKDEDGFLYMCYSSEKTFGY 416 FK +F R +E ++I ++P ++PVI ERY + LP ++K KFLVP +++ + + I+ RL L P +A F+ V ++ +T + +YE KDEDGFLYM Y+S++TFG+ Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFGF 121
BLAST of EY665267 vs. ExPASy Swiss-Prot
Match: MLP3C_HUMAN (Microtubule-associated proteins 1A/1B light chain 3C OS=Homo sapiens GN=MAP1LC3C PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 8.189e-18 Identity = 45/117 (38.46%), Postives = 77/117 (65.81%), Query Frame = 3 Query: 69 MQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKAD-LPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKD-TLPHTATLLDSVYESFKDEDGFLYMCYSSEKTFG 413 ++ FK + R EE I AK+P+++PV+ ERY + LP ++K KFLVP+++++ QF+ I+ SR+ L +A ++ V + +L + + +Y +KDEDGF+YM Y+S++TFG Sbjct: 10 VRPFKQRKSLAIRQEEVAGIRAKFPNKIPVVVERYPRETFLPPLDKTKFLVPQELTMTQFLSIIRSRMVLRATEAFYLLVNNKSLVSMSATMAEIYRDYKDEDGFVYMTYASQETFG 126
BLAST of EY665267 vs. ExPASy Swiss-Prot
Match: ATG8E_ORYSJ (Putative autophagy-related protein 8E OS=Oryza sativa subsp. japonica GN=ATG8E PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 6.933e-17 Identity = 46/84 (54.76%), Postives = 58/84 (69.05%), Query Frame = 3 Query: 165 ERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPHTATLLDSVYESFKDE-DGFLYMCYSSEKTFG 413 +++S+++LP+MEK+K LHL PG ALFVFV +TLP TA L+ SVYES+KDE DGFLY+CYSSEKTFG Sbjct: 23 DKFSRSNLPEMEKRK-------------------LHLPPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 87
BLAST of EY665267 vs. ExPASy Swiss-Prot
Match: LGG2_CAEEL (Protein lgg-2 OS=Caenorhabditis elegans GN=lgg-2 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.804e-15 Identity = 43/119 (36.13%), Postives = 74/119 (62.18%), Query Frame = 3 Query: 63 GKMQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERY-SKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKD-TLPHTATLLDSVYESFKDEDGFLYMCYSSEKTFG 413 G + SFK+ F +R ++ EI ++ P++VPVI ER+ + LP M++ KFLVP ++V + + I+ RL L P +A F+ V + ++ + + ++Y +D DGF+YM Y+S+ FG Sbjct: 12 GIVPSFKERRPFHERQKDVEEIRSQQPNKVPVIIERFDGERSLPLMDRCKFLVPEHITVAELMSIVRRRLQLHPQQAFFLLVNERSMVSNSMSMSNLYSQERDPDGFVYMVYTSQPAFG 130 The following BLAST results are available for this feature:
BLAST of EY665267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665267 ID=EY665267; Name=EY665267; organism=Citrus sinensis; type=EST; length=1077bpback to top |