CV884356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.322e-27 Identity = 53/130 (40.77%), Postives = 86/130 (66.15%), Query Frame = 3 Query: 117 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKRE 506 +R++++ +RL +P GI P ++N ++ VI GP D+P++GGTFKL L E+YP P VRF+++++HPN+ G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N+ + Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQ 135
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.322e-27 Identity = 53/130 (40.77%), Postives = 86/130 (66.15%), Query Frame = 3 Query: 117 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKRE 506 +R++++ +RL +P GI P ++N ++ VI GP D+P++GGTFKL L E+YP P VRF+++++HPN+ G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N+ + Sbjct: 6 RRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQ 135
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.644e-27 Identity = 62/162 (38.27%), Postives = 92/162 (56.79%), Query Frame = 3 Query: 99 MSTPARKRLMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 542 M++ A L + K L + P G S G + NI W+ I GP DT ++GG F + F ++YPN PPTVRF S ++HPN+Y DG +C+ IL +W+P++ V +I+ SI S+L PN SPAN EAA+ + E + E+ ++V V +S Sbjct: 1 MNSQACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVRKS 162
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.628e-27 Identity = 61/156 (39.10%), Postives = 92/156 (58.97%), Query Frame = 3 Query: 117 KRLMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 542 K+ + D +R+ D G S G DN+I W ++ GP DT ++GG FK L F DYP KPP ++F+S ++HPNI +G++C+ IL + +W P++ V IL S+ S+L DPN SPAN +AA+M EN E+ ++V + V +S Sbjct: 9 KKQLADMRRVPVD---GFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFKKKVAQCVRRS 161
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC14_ARATH (Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana GN=UBC14 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.257e-26 Identity = 59/154 (38.31%), Postives = 88/154 (57.14%), Query Frame = 3 Query: 123 LMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 542 L + K L + P G S G + N+ W+ I GP DT ++GG F + F E+YP PPTV F S M+HPN+Y+DG +C+ IL +W+P++ V +I+ SI S+L PN SPAN EAA+ + +N+ E+ ++V V +S Sbjct: 10 LQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKVSRCVRRS 163
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.642e-26 Identity = 54/135 (40.00%), Postives = 81/135 (60.00%), Query Frame = 3 Query: 174 GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICL------------DILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 542 G D+N+ W I GP +T +DGG F + F ++YPN PPTVRF S M+HPN+Y DG +C+ ++ +W+P++ V +I+ SI S+L PN SPAN EAA+ + E + E+ ++VR V +S Sbjct: 30 GFVDDSNVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISIHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKQDEFKKKVRRAVRKS 164
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.642e-26 Identity = 58/143 (40.56%), Postives = 85/143 (59.44%), Query Frame = 3 Query: 99 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 527 +ST A KR+ ++ + DPP S P+ +NI W + I GP + ++GG F L + F+ DYP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P A + N+ E++R R+ Sbjct: 53 LSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQ 194
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.642e-26 Identity = 58/143 (40.56%), Postives = 85/143 (59.44%), Query Frame = 3 Query: 99 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 527 +ST A KR+ ++ + DPP S P+ +NI W + I GP + ++GG F L + F+ DYP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P A + N+ E++R R+ Sbjct: 53 LSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQ 194
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.801e-26 Identity = 58/143 (40.56%), Postives = 85/143 (59.44%), Query Frame = 3 Query: 99 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 527 +ST A KR+ ++ + DPP S P+ +NI W + I GP + ++GG F L + F+ DYP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P A + N+ E++R R+ Sbjct: 59 LSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQ 200
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.801e-26 Identity = 58/143 (40.56%), Postives = 85/143 (59.44%), Query Frame = 3 Query: 99 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 527 +ST A KR+ ++ + DPP S P+ +NI W + I GP + ++GG F L + F+ DYP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P A + N+ E++R R+ Sbjct: 59 LSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQ 200 The following BLAST results are available for this feature:
BLAST of CV884356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 255
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884356 ID=CV884356; Name=CV884356; organism=Citrus sinensis; type=EST; length=759bpback to top |