CV884356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.801e-26 Identity = 58/143 (40.56%), Postives = 85/143 (59.44%), Query Frame = 3 Query: 99 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 527 +ST A KR+ ++ + DPP S P+ +NI W + I GP + ++GG F L + F+ DYP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P A + N+ E++R R+ Sbjct: 59 LSTSA-KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQ 200
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.801e-26 Identity = 58/143 (40.56%), Postives = 85/143 (59.44%), Query Frame = 3 Query: 99 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 527 +ST A KR+ ++ + DPP S P+ +NI W + I GP + ++GG F L + FT +YP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P A + N+ E++R R+ Sbjct: 45 LSTSA-KRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQ 186
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.801e-26 Identity = 58/143 (40.56%), Postives = 85/143 (59.44%), Query Frame = 3 Query: 99 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 527 +ST A KR+ ++ + DPP S P+ +NI W + I GP + ++GG F L + FT +YP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P A + N+ E++R R+ Sbjct: 45 LSTSA-KRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQ 186
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.659e-26 Identity = 55/152 (36.18%), Postives = 98/152 (64.47%), Query Frame = 3 Query: 99 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYAD-GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 551 MS +R+ ++ +QQD AGI +++I + GP+ TP++GG F + ++ DYP +PP + F ++++HPN+ + G+ICLDIL++QWSP+Y + + L S+QSLLC P P++P +++ A+++ +N +++ R RE WT+ Sbjct: 1 MSDNRSRRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTARE-----WTS 147
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC9_PAGMA (SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ube2i PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.778e-26 Identity = 60/149 (40.27%), Postives = 84/149 (56.38%), Query Frame = 3 Query: 99 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 524 MS A RL ++ K ++D P G+ P N N+M I G TPW+GG FKL + F +DYP+ PP +F +FHPN+Y G++CL IL+ W P + IL IQ LL +PN PA +EA +F +++ EY +RVR Sbjct: 1 MSGIALSRLAQERKAWRKDHPLGLVAVPTKNPDGTMNLMNGECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIFCQDRTEYEKRVR 149
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC9_MESAU (SUMO-conjugating enzyme UBC9 OS=Mesocricetus auratus GN=UBE2I PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.151e-26 Identity = 58/149 (38.93%), Postives = 82/149 (55.03%), Query Frame = 3 Query: 99 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 524 MS A RL ++ K ++D P G P N N+M W I G TPW+GG FKL + F +DYP+ PP +F +FHPN+Y G++CL IL+ W P + + IQ LL +PN PA +EA ++ +N+ EY +R R Sbjct: 1 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITINQLFIGIQELLNEPNIQEPAQAEAYTIYCQNRVEYEKRFR 149
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.151e-26 Identity = 50/137 (36.50%), Postives = 86/137 (62.77%), Query Frame = 3 Query: 117 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 527 KR++++ + L +DPP GI AP ++N+ + + GP + ++GG F L L ++YP PP VRF+++++HPN+ G ICL L+ WSP + +L SIQ+L+ PNP+ P +++ A+++ EN+ + RE Sbjct: 5 KRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANARE 141
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.390e-25 Identity = 50/140 (35.71%), Postives = 89/140 (63.57%), Query Frame = 3 Query: 111 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 527 A KRL ++ + + PP+ S D+N+ W A + GP+ +P++ G F + + DYP KPPT++F ++++HPNI +DG+IC ++ + WSP + +LT+I+S+L DPNP++P +E A+ F ++ +N+ +E Sbjct: 3 AHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVF-STWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKE 141
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.816e-25 Identity = 57/148 (38.51%), Postives = 89/148 (60.14%), Query Frame = 3 Query: 108 PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 551 P KRL ++ L GIS P+ +N+ W I G T ++ +KL+L+F YP PTV+F++ +HPN+ G+ICLDIL+++WS +YDV IL SIQSLL +PN +SP N+ AA ++ +N + + ++E + T+ Sbjct: 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTS 176
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC9_YEAST (SUMO-conjugating enzyme UBC9 OS=Saccharomyces cerevisiae GN=UBC9 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.816e-25 Identity = 57/148 (38.51%), Postives = 84/148 (56.76%), Query Frame = 3 Query: 99 MSTPARKRLMRDFKRLQQDPPAGISGAPQDN-----NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRV 521 MS+ +RL + K+ ++D P G P ++ W A I G + T W GG + +T+++ +YP+KPP V+F + +HPN+Y G+ICL IL W P + I+ +Q LL PNPNSPA A R FS NK EY+++V Sbjct: 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKV 148 The following BLAST results are available for this feature:
BLAST of CV884356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 255
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884356 ID=CV884356; Name=CV884356; organism=Citrus sinensis; type=EST; length=759bpback to top |