CV884356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.371e-25 Identity = 57/148 (38.51%), Postives = 88/148 (59.46%), Query Frame = 3 Query: 108 PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 551 P KRL ++ L GIS P+ +N+ W I G T ++ +KL+L+F YP PTV+F++ +HPN+ G+ICLDIL+ +WS +YDV IL SIQSLL +PN +SP N+ AA ++ +N + + ++E + T+ Sbjct: 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTS 176
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.097e-25 Identity = 57/137 (41.61%), Postives = 84/137 (61.31%), Query Frame = 3 Query: 117 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 527 KRL ++ L GIS P+ +N+ W I G T ++ +KL+L+F YP PTV+FV+ FHPN+ + G+ICLDIL+++WS +YDV IL S+QSLL +PN SP N AA ++ +N+ Y + + E Sbjct: 33 KRLQQELMTLMMSGDKGISAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELW-QNQTAYKKHLHE 168
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.097e-25 Identity = 56/140 (40.00%), Postives = 86/140 (61.43%), Query Frame = 3 Query: 108 PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 527 P KRL ++ L GIS P+ +N+ W I G T ++ +KL+L+F YP PTV+F++ +HPN+ G+ICLDIL+++WS +YDV IL SIQSLL +PN +SP N+ AA ++ +N + + ++E Sbjct: 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQE 168
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.097e-25 Identity = 53/136 (38.97%), Postives = 81/136 (59.56%), Query Frame = 3 Query: 117 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 524 KR+ ++ + DPP S P+ +N+ W + I GP + ++GG F L + F+ +YP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P A + +N+ E++R R Sbjct: 89 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRIAR 224
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.045e-25 Identity = 52/113 (46.02%), Postives = 76/113 (67.26%), Query Frame = 3 Query: 189 NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 527 NNI W AVI GPD TP++GG F L+++F DYP KPP F + ++HPNI +GSIC++IL+++W+P V +L SI LL PNP+ P E ++F N+ ++++R RE Sbjct: 34 NNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRARE 146
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.900e-25 Identity = 56/140 (40.00%), Postives = 86/140 (61.43%), Query Frame = 3 Query: 108 PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 527 P KRL ++ L GIS P+ +N+ W I G T ++ +KL+L+F YP PTV+F++ +HPN+ G+ICLDIL+++WS +YDV IL SIQSLL +PN +SP N+ AA ++ +N + + ++E Sbjct: 30 PVGKRLQQELMILMTSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQE 168
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 6.900e-25 Identity = 57/155 (36.77%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 123 LMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKR-EYNRRVREIVEQS 542 L R L ++P G S G DN++ W +I GP DT ++GG FK L F +DYP +PP ++F++ ++HPN+ +G +C+ IL + +W PI+ V I+ S+ S+L DPN +SPAN +AA+ + E++ E+ R+V V +S Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKS 164
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 6.900e-25 Identity = 57/155 (36.77%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 123 LMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKR-EYNRRVREIVEQS 542 L R L ++P G S G DN++ W +I GP DT ++GG FK L F +DYP +PP ++F++ ++HPN+ +G +C+ IL + +W PI+ V I+ S+ S+L DPN +SPAN +AA+ + E++ E+ R+V V +S Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKS 164
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.900e-25 Identity = 57/155 (36.77%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 123 LMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKR-EYNRRVREIVEQS 542 L R L ++P G S G DN++ W +I GP DT ++GG FK L F +DYP +PP ++F++ ++HPN+ +G +C+ IL + +W PI+ V I+ S+ S+L DPN +SPAN +AA+ + E++ E+ R+V V +S Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKS 164
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 6.900e-25 Identity = 57/155 (36.77%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 123 LMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKR-EYNRRVREIVEQS 542 L R L ++P G S G DN++ W +I GP DT ++GG FK L F +DYP +PP ++F++ ++HPN+ +G +C+ IL + +W PI+ V I+ S+ S+L DPN +SPAN +AA+ + E++ E+ R+V V +S Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKS 164 The following BLAST results are available for this feature:
BLAST of CV884356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 255
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884356 ID=CV884356; Name=CV884356; organism=Citrus sinensis; type=EST; length=759bpback to top |