CV884356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC_ASFP4 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=UBC PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.177e-24 Identity = 55/153 (35.95%), Postives = 88/153 (57.52%), Query Frame = 3 Query: 123 LMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--------WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMF-----SENKREYNRRVREIVEQS 542 LM +++ L ++P + +NN+ W+ ++ GP DT ++GG FK + F +YP +PP + F S M+HPNIY+DG +C+ IL WSP+ + IL S+ SLL +PN +SPAN +AA+ + E+ Y V+ V++S Sbjct: 6 LMAEYRHLTENPSENFKVSVNENNMTEWDVILKGPADTLYEGGLFKAKIGFPPNYPYEPPRLTFTSEMWHPNIYSDGRVCISILHGDNAEEQGMTWSPVQKIDTILLSVISLLNEPNTDSPANVDAAKSYRRFVHKEDLESYPMEVKRTVKKS 158
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC_ASFM2 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.177e-24 Identity = 60/179 (33.52%), Postives = 100/179 (55.87%), Query Frame = 3 Query: 123 LMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--------WSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR-----MFSENKREYNRRVREIVEQSWTAD*LHSHSLPH*KPSRVVLLPLPN 620 L+ ++K L +P + ++N+ W+ ++ GP DT ++GG FK + F YP +PP + F S M+HPNIY+DG +C+ IL WSP + +L S+ SLL +PNP+SPAN +AA+ ++ E+ Y V++ V++S D + + + K V +LP+P+ Sbjct: 6 LLAEYKNLIVNPSEHFKISVNEDNLTEWDVILKGPPDTLYEGGLFKAKIVFPPKYPYEPPRLTFTSEMWHPNIYSDGKLCISILHGDNAEEQGMTWSPAQKIDTVLLSVISLLNEPNPDSPANVDAAKSYRKYLYKEDLESYPMEVKKTVKKS--LDECSAEDIEYFKNVPVNVLPVPS 182
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC_ASFB7 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.177e-24 Identity = 56/153 (36.60%), Postives = 88/153 (57.52%), Query Frame = 3 Query: 123 LMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--------WSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR-----MFSENKREYNRRVREIVEQS 542 L+ +++ L ++P + +NNI W+ ++ GP DT ++GG FK + F +YP PP + F S M+HPNIY DG +C+ IL WSP + IL S+ SLL +PNP+SPAN +AA+ ++ E+ Y V++ V++S Sbjct: 6 LIAEYRHLIENPSENFKISVNENNITEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPKLTFTSEMWHPNIYPDGRLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKYVYKEDLESYPMEVKKTVKKS 158
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.622e-24 Identity = 54/138 (39.13%), Postives = 87/138 (63.04%), Query Frame = 3 Query: 111 ARKRLMRDFKRLQQDPPAG--ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMF-SENKREYN 512 +R RL +++K +Q++ A I D NI W A+I GP +TP++GG F+L E YP +PP VRF++++FHPN+ + G ICLDIL+N WSP + + ++ +I +L+ P P+SP N ++ + S + R +N Sbjct: 4 SRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFN 141
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC_ASFWA (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=UBC PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.424e-24 Identity = 56/153 (36.60%), Postives = 86/153 (56.21%), Query Frame = 3 Query: 123 LMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--------WSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR-----MFSENKREYNRRVREIVEQS 542 LM +++ L ++P + +N++ W+ ++ GP DT ++GG FK + F +YP PP + F S M+HPNIY DG +C+ IL WSP + IL S+ SLL +PNP+SPAN +AA+ M E+ Y V+ V++S Sbjct: 6 LMAEYRHLIENPSENFKISVNENDMTEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPRLTFTSEMWHPNIYPDGKLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKLMHKEDLESYPMEVKRTVKKS 158
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.472e-24 Identity = 53/148 (35.81%), Postives = 84/148 (56.76%), Query Frame = 3 Query: 87 WVVTMSTPAR-KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 527 WV S A KR+ R+ L DPP S P+ +N+ W A I GP TP++GG F L + F DYP KPP + F +R++H N+ G + ++IL++ WSP + +L +I+S+ P P SPA AR++ ++ +++ +E Sbjct: 28 WVAKTSVSASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKE 175
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBE2S_DROYA (Ubiquitin-conjugating enzyme E2 S OS=Drosophila yakuba GN=GE15576 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.963e-24 Identity = 51/149 (34.23%), Postives = 86/149 (57.72%), Query Frame = 3 Query: 90 VVTMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 536 V +S +++MR+ + ++ PP GI ++++ A+I GP TP+ G F++ L +D+P PP F++++FHPN+ A+G IC++ L+ W P + IL +I+ LL PNP S N EA +M E +Y++R R + E Sbjct: 8 VENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGVFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBE2S_DROER (Ubiquitin-conjugating enzyme E2 S OS=Drosophila erecta GN=GG18165 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.963e-24 Identity = 51/149 (34.23%), Postives = 86/149 (57.72%), Query Frame = 3 Query: 90 VVTMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 536 V +S +++MR+ + ++ PP GI ++++ A+I GP TP+ G F++ L +D+P PP F++++FHPN+ A+G IC++ L+ W P + IL +I+ LL PNP S N EA +M E +Y++R R + E Sbjct: 8 VENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGVFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UB2R2_RABIT (Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus cuniculus GN=UBE2R2 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.963e-24 Identity = 60/165 (36.36%), Postives = 95/165 (57.58%), Query Frame = 3 Query: 105 TPARKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSE--NKREYNRRVREIVEQSWTA 551 T ++K LM + K LQ++P G D +++ W IFGP +T ++GG FK ++F DYP PPT RF+++M+HPNIY +G +C+ IL +W+P +V IL S+ SLL +PN SPAN +A+ MF + + + ++ EI+ + +A Sbjct: 7 TSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSA 171
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UB2R2_MOUSE (Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus GN=Ube2r2 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.963e-24 Identity = 60/165 (36.36%), Postives = 95/165 (57.58%), Query Frame = 3 Query: 105 TPARKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSE--NKREYNRRVREIVEQSWTA 551 T ++K LM + K LQ++P G D +++ W IFGP +T ++GG FK ++F DYP PPT RF+++M+HPNIY +G +C+ IL +W+P +V IL S+ SLL +PN SPAN +A+ MF + + + ++ EI+ + +A Sbjct: 7 TSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSA 171 The following BLAST results are available for this feature:
BLAST of CV884356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 255
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884356 ID=CV884356; Name=CV884356; organism=Citrus sinensis; type=EST; length=759bpback to top |