CV884356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.325e-22 Identity = 56/157 (35.67%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 120 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD*LHSHSLP 578 RL R+ + L ++PP G+ ++N+ A I G +P++GG F L + E YP +PP +RF++ ++HPNI + G ICLDIL + W P +++ +LTSIQ L+ +PNP+ P ++ + F +YNR V + WT H+LP Sbjct: 6 RLKRELQLLNKEPPPGVICWQNESNMDDLRAQIIGGSGSPYEGGIFNLEIIVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNPDDPLMADISSEF-----KYNRAVFFSNAKKWT----EKHALP 153
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.077e-21 Identity = 48/151 (31.79%), Postives = 87/151 (57.62%), Query Frame = 3 Query: 90 VVTMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ-WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 539 + + S + +RL +++ L++ P I D+N+ W GP D+ + GG F +L+F DYP +PPT+ F +R++HPN ++G++CL IL+ Q + P + ++L I LL +PNP+ P + A + ++ +++ R+ VEQ Sbjct: 1 MASASPSSSRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIARDYVEQ 151
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.713e-21 Identity = 48/130 (36.92%), Postives = 80/130 (61.54%), Query Frame = 3 Query: 120 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPD-DTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKRE 506 R++++ +RL +P GI P ++N ++ VI G D+P++GGTFK L E+YP P VRF+++++HPN+ I LDIL+++WSP + +L SIQ+LL PNP+ P ++ + N+ + Sbjct: 7 RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGESKDSPFEGGTFKRELLLAEEYPMAAPKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPLANDVVEQWKTNEAQ 136
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.713e-21 Identity = 52/144 (36.11%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 120 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 539 RL R+ L +PP GI+ + + A I G +TP++ G FKL + E YP +PP +RF++ ++HPNI + G ICLD+L + W P ++A +LTSIQ L+ +PNP+ P ++ + F NK + + R+ E+ Sbjct: 6 RLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEK 149
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.713e-21 Identity = 51/144 (35.42%), Postives = 82/144 (56.94%), Query Frame = 3 Query: 120 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 539 RL R+ L +PP GI+ + + A I G +TP++ G FKL + E YP +PP +RF++ ++HPNI + G ICLD+L + W P ++A +LT IQ L+ +PNP+ P ++ + F NK + + R+ E+ Sbjct: 6 RLKRELSLLAAEPPPGITCWQDGDRMEDLRAQILGGANTPYEKGVFKLEVHIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFKYNKPVFFKNARQWTEK 149
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBE2S_BRAFL (Ubiquitin-conjugating enzyme E2 S OS=Branchiostoma floridae GN=BRAFLDRAFT_259979 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.713e-21 Identity = 50/149 (33.56%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 90 VVTMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 536 V +S +++ ++ L PP G+ P + +I A I GP TP++GG FK+ L +D+P PP F++++FHPN+ +G IC++ L+ W + IL +I+ LL PNP S N EA ++ E Y+ R R + E Sbjct: 7 VENLSPQIIRQVAKEVLDLANHPPEGVKVFPNEQDITDVQATIEGPGGTPYEGGQFKIKLSLGKDFPQTPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKADLGLKHILLTIKCLLIYPNPESALNEEAGKLLLEQYDNYSERARMMTE 155
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.045e-21 Identity = 51/143 (35.66%), Postives = 83/143 (58.04%), Query Frame = 3 Query: 120 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 536 RL ++ L +PP GI+ + + + A I G +TP++ G F L + E YP +PP VRF++ ++HPNI + G ICLDIL + W P ++A +LTSIQ L+ +PNP+ P ++ + F NK + ++ ++ E Sbjct: 6 RLKKELHMLAIEPPPGITCWQEKDQVADLRAQILGGANTPYEKGVFTLEVIIPERYPFEPPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADISSEFKYNKIAFLKKAKQWTE 148
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBE2S_DANRE (Ubiquitin-conjugating enzyme E2 S OS=Danio rerio GN=ube2s PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.894e-21 Identity = 47/136 (34.56%), Postives = 76/136 (55.88%), Query Frame = 3 Query: 129 RDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 536 ++ L DPP GI P + +I + I GP+ TP+ GG F++ L +D+P PP F++++FHPN+ G IC+++L+ W + +L +I+ LL PNP S N EA ++ E+ +EY R + E Sbjct: 18 KEVSALAADPPEGIKIYPSEEDITELHTSIEGPEGTPYAGGVFRMRLVLGKDFPAVPPRGYFLTKIFHPNVGHKGEICVNVLKRDWKAELGLRHVLLTIKCLLIHPNPESALNEEAGKLLLEDYKEYASRAHLLTE 153
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC8_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC8 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.894e-21 Identity = 45/125 (36.00%), Postives = 83/125 (66.40%), Query Frame = 3 Query: 186 DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILT-SIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 554 ++++ ++ GP DTP++ G ++L ++ ++YP K P++ FV+++FHPNI A GSICLD++ + WSP+YD+ I+ I LL +PN + P N+EAA + +K+ Y +++E +++ T + Sbjct: 26 NDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYPYKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPLNNEAATLQLRDKKLYEEKIKEYIDKYATKE 150
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20 Identity = 53/153 (34.64%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 120 RLMRDFKRLQQDPPAGIS---------GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 539 R+ ++ K L DPP G S G+ + +A I GP+DT + G F L +Q E YP +PP V F + ++HPNI G ICLDIL + W P +++ +LTS++ LL +PNP+ E +R + N++ ++ + RE+ E+ Sbjct: 10 RMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEK 162 The following BLAST results are available for this feature:
BLAST of CV884356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 255
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884356 ID=CV884356; Name=CV884356; organism=Citrus sinensis; type=EST; length=759bpback to top |