CV884356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.031e-29 Identity = 60/161 (37.27%), Postives = 95/161 (59.01%), Query Frame = 3 Query: 102 STPARKRLMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 542 S+ + + L + K +Q++PP G S G D +I W +I GP+DT ++GG F TL F +DYP PP ++F + ++HPN++ +G +C+ IL +W P++ IL S+ S+L PN SPAN +AA+ F EN +E+ +RVR +V +S Sbjct: 3 SSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVRRS 163
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.031e-29 Identity = 63/162 (38.89%), Postives = 95/162 (58.64%), Query Frame = 3 Query: 99 MSTPARKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 542 M+ A KRLM ++K+L +PP GI P + N W A+I GP+DT ++ G F L F DYP PP +RF MFHPNIY DG +C+ IL +WSP+ V IL S+ S+L +PN S AN +A++M+ +++ ++ + ++IV++S Sbjct: 1 MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 162
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UB2G2_MOUSE (Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.031e-29 Identity = 63/162 (38.89%), Postives = 95/162 (58.64%), Query Frame = 3 Query: 99 MSTPARKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 542 M+ A KRLM ++K+L +PP GI P + N W A+I GP+DT ++ G F L F DYP PP +RF MFHPNIY DG +C+ IL +WSP+ V IL S+ S+L +PN S AN +A++M+ +++ ++ + ++IV++S Sbjct: 1 MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 162
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UB2G2_HUMAN (Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.031e-29 Identity = 63/162 (38.89%), Postives = 95/162 (58.64%), Query Frame = 3 Query: 99 MSTPARKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 542 M+ A KRLM ++K+L +PP GI P + N W A+I GP+DT ++ G F L F DYP PP +RF MFHPNIY DG +C+ IL +WSP+ V IL S+ S+L +PN S AN +A++M+ +++ ++ + ++IV++S Sbjct: 1 MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 162
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UB2G2_BOVIN (Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.031e-29 Identity = 63/162 (38.89%), Postives = 95/162 (58.64%), Query Frame = 3 Query: 99 MSTPARKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 542 M+ A KRLM ++K+L +PP GI P + N W A+I GP+DT ++ G F L F DYP PP +RF MFHPNIY DG +C+ IL +WSP+ V IL S+ S+L +PN S AN +A++M+ +++ ++ + ++IV++S Sbjct: 1 MAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKVAKQIVQKS 162
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.755e-28 Identity = 58/137 (42.34%), Postives = 87/137 (63.50%), Query Frame = 3 Query: 117 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 527 KR++++ +RL +P GIS P +N + I GP D+P++GG F L L T+DYP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A + N++E R RE Sbjct: 6 KRIIKETQRLMTEPAPGISATPATDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEHWKTNEKEAMARARE 142
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.993e-28 Identity = 60/156 (38.46%), Postives = 94/156 (60.26%), Query Frame = 3 Query: 99 MSTPARKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 524 MS A+KRL+++ ++L +D P GI P+ +NNI +W+ +I GP DTP+ G F L+F +DYP PP + F + HPNIY +G +C+ IL + +WSP+ V IL S+ S+L +PN S AN +A ++ +N+ E+ R+V+ Sbjct: 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVK 156
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.993e-28 Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 3 Query: 117 KRLMRDFKRLQQDPPAGISGAP-QDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 539 KRL + +L IS P DN++ W I GP DTP+ G FK++L+F ++YP PP ++F+S M+HPN+ G+ICLDIL+ +WS +Y+V IL S+QSLL +PN SP N+ AA ++ + EY ++V E+ Sbjct: 11 KRLQNELLQLLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEYRKKVLACYEE 152
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.993e-28 Identity = 64/145 (44.14%), Postives = 92/145 (63.45%), Query Frame = 3 Query: 117 KRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNR----RVREIVE 536 KRL + L GIS P D+N++ W I GP DT ++G FK+++ F +YP PPT+ F S M+HPN+ G+ICLDIL+++WS +Y+V IL S+QSLL +PN SP N++AA ++S++ EY R R +EI E Sbjct: 31 KRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYKRLLMQRYKEIDE 175
BLAST of CV884356 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.909e-28 Identity = 61/137 (44.53%), Postives = 87/137 (63.50%), Query Frame = 3 Query: 117 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 527 KRL ++ + L GI+ P +N+ W A + GP DT ++ +KLTL+F DYP KPP V+F + +HPN+ G+ICLDIL+ W+ YDV IL S+QSLL +PN SP N++AA M+S N+ EY + + E Sbjct: 33 KRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMWS-NQTEYKKVLHE 168 The following BLAST results are available for this feature:
BLAST of CV884356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 255
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884356 ID=CV884356; Name=CV884356; organism=Citrus sinensis; type=EST; length=759bpback to top |