EY665264

Overview
NameEY665264
Unique NameEY665264
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1023
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665264_ssr960 microsatellite EY665264_ssr960:960..971. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.129e-17
Identity = 33/75 (44.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query:  181 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            A KR++++ K LQ DPP   S  P   ++  W A I GP D+P+ GG F +++ F  DYP KPP V F +++FHP
Sbjct:    5 ARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHP 79          

HSP 2 Score: 31.9574 bits (71), Expect = 2.129e-17
Identity = 20/42 (47.62%), Postives = 25/42 (59.52%), Query Frame = 2
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPNP 529
            PNI+++GSICLDIL +   S       +L SI    L DPNP
Sbjct:   79 PNIYADGSICLDIL-QNQWSPIYDVAAILTSI-QSLLCDPNP 118          
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: U2D2L_HUMAN (Putative ubiquitin-conjugating enzyme E2 D2-like protein OS=Homo sapiens GN=UBE2DNL PE=5 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.932e-17
Identity = 42/77 (54.55%), Postives = 51/77 (66.23%), Query Frame = 1
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPK 408
            MA K I KE  +L +DP   CSAGPV +DM HWQATI  P+DS Y GGVF   + FP DY FKPPK+ F   ++H +
Sbjct:    1 MALKLIHKEFLELARDPQPHCSAGPVWDDMLHWQATITRPNDSSYLGGVFF--LKFPSDYLFKPPKIKFTNGIYHQR 75          
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.742e-16
Identity = 33/75 (44.00%), Postives = 51/75 (68.00%), Query Frame = 1
Query:  181 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            A +R++++ K +Q DPP   SA PVA+++  W A I+GP+D+P+  G F + +HF   YP KPP V F +++FHP
Sbjct:    5 ARRRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHP 79          

HSP 2 Score: 25.409 bits (54), Expect = 1.742e-16
Identity = 16/41 (39.02%), Postives = 21/41 (51.22%), Query Frame = 2
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPN 526
            PN++  G +CLDIL +   S       +L SI    L DPN
Sbjct:   79 PNVYGTGELCLDIL-QNRWSPTYDVAAILTSI-QSLLNDPN 117          
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.742e-16
Identity = 33/75 (44.00%), Postives = 51/75 (68.00%), Query Frame = 1
Query:  181 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            A +R++++ K +Q DPP   SA PVA+++  W A I+GP+D+P+  G F + +HF   YP KPP V F +++FHP
Sbjct:    5 ARRRLMRDFKRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHP 79          

HSP 2 Score: 25.409 bits (54), Expect = 1.742e-16
Identity = 16/41 (39.02%), Postives = 21/41 (51.22%), Query Frame = 2
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPN 526
            PN++  G +CLDIL +   S       +L SI    L DPN
Sbjct:   79 PNVYGTGELCLDIL-QNRWSPTYDVAAILTSI-QSLLNDPN 117          
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 2.264e-16
Identity = 32/75 (42.67%), Postives = 50/75 (66.67%), Query Frame = 1
Query:  181 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            A +R++++ K +Q DPP   SA PV +++  W A I+GP+D+P+  G F + +HF   YP KPP V F +++FHP
Sbjct:    5 ARRRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPSVKFISEMFHP 79          

HSP 2 Score: 26.1794 bits (56), Expect = 2.264e-16
Identity = 17/41 (41.46%), Postives = 22/41 (53.66%), Query Frame = 2
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPN 526
            PN+++ G +CLDIL +   S       VL SI    L DPN
Sbjct:   79 PNVYATGELCLDIL-QNRWSPTYDVAAVLTSI-QSLLNDPN 117          
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UBC2_USTMA (Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis GN=UBC2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.775e-16
Identity = 31/75 (41.33%), Postives = 46/75 (61.33%), Query Frame = 1
Query:  181 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            + KR++++ K L  DPP   S  P A+++  W A I GP+D+P+  G F + + F   YP KPP V F +K+FHP
Sbjct:    5 SKKRLIRDFKRLSTDPPGGISGAPCADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPNKPPTVKFLSKMFHP 79          

HSP 2 Score: 30.8018 bits (68), Expect = 3.775e-16
Identity = 18/42 (42.86%), Postives = 24/42 (57.14%), Query Frame = 2
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPNP 529
            PN+++NG +CLDIL +   S       +L SI    L DPNP
Sbjct:   79 PNVYANGELCLDIL-QNRWSPTYDVAAILTSI-QSLLHDPNP 118          
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UBC2_TRIHA (Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.827e-16
Identity = 30/75 (40.00%), Postives = 50/75 (66.67%), Query Frame = 1
Query:  181 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            A +R++++ K +Q DPP   SA P+ +++  W A I+GP+D+P+  G F + + F   YP KPP+V F +++FHP
Sbjct:    5 ARRRLMRDFKRMQTDPPAGVSASPIPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISQMFHP 79          

HSP 2 Score: 28.4906 bits (62), Expect = 3.827e-16
Identity = 18/41 (43.90%), Postives = 23/41 (56.10%), Query Frame = 2
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPN 526
            PN+++NG +CLDIL +   S       VL SI    L DPN
Sbjct:   79 PNVYANGELCLDIL-QNRWSPTYDVAAVLTSI-QSLLNDPN 117          
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.175e-16
Identity = 37/75 (49.33%), Postives = 51/75 (68.00%), Query Frame = 1
Query:  181 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            A KR+ KE+ D+ K PP+ CSA  V +++  W+AT+ GP  SP+  GVF + I  P DYPFKPP + F TK++HP
Sbjct:    3 AHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHP 77          
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.915e-16
Identity = 31/75 (41.33%), Postives = 52/75 (69.33%), Query Frame = 1
Query:  181 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            A +R++++ K +Q+DPP+  SA P+ +++  W A I+GPSD+P+  G F + + F   YP KPP+V F +++FHP
Sbjct:    5 ARRRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHP 79          

HSP 2 Score: 26.5646 bits (57), Expect = 4.915e-16
Identity = 15/41 (36.59%), Postives = 23/41 (56.10%), Query Frame = 2
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPN 526
            PN++++G +CLDIL +   S       +L S+    L DPN
Sbjct:   79 PNVYASGELCLDIL-QNRWSPTYDVSSILTSV-QSLLNDPN 117          
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.967e-16
Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 1
Query:  181 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            A +R++++ K LQ+DPP   S  P   ++  W A I GP  +P+  G F +TI F  +YP KPP V F +K+FHP
Sbjct:    5 ARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHP 79          

HSP 2 Score: 30.0314 bits (66), Expect = 4.967e-16
Identity = 18/42 (42.86%), Postives = 25/42 (59.52%), Query Frame = 2
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPNP 529
            PN++++GSICLDIL +   S       +L SI    L +PNP
Sbjct:   79 PNVYADGSICLDIL-QNRWSPTYDVSSILTSI-QSLLDEPNP 118          
The following BLAST results are available for this feature:
BLAST of EY665264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
UBC2_MEDSA2.129e-1744.00Ubiquitin-conjugating enzyme E2 2 OS=Medicago sati... [more]
U2D2L_HUMAN4.932e-1754.55Putative ubiquitin-conjugating enzyme E2 D2-like p... [more]
UBC2_EMENI1.742e-1644.00Ubiquitin-conjugating enzyme E2 2 OS=Emericella ni... [more]
UBC2_ASPFU1.742e-1644.00Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus f... [more]
UBC2_NEUCR2.264e-1642.67Ubiquitin-conjugating enzyme E2 2 OS=Neurospora cr... [more]
UBC2_USTMA3.775e-1641.33Ubiquitin-conjugating enzyme E2 2 OS=Ustilago mayd... [more]
UBC2_TRIHA3.827e-1640.00Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma h... [more]
UBCB_DICDI4.175e-1649.33Ubiquitin conjugating enzyme E2 B OS=Dictyostelium... [more]
UBC2_CANAL4.915e-1641.33Ubiquitin-conjugating enzyme E2 2 OS=Candida albic... [more]
UBE2A_MOUSE4.967e-1642.67Ubiquitin-conjugating enzyme E2 A OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-H08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665264 ID=EY665264; Name=EY665264; organism=Citrus sinensis; type=EST; length=1023bp
AGACAACGAAGCAAGGGGTTGATAGAGGAGCGAGGCGGGGGCGGCTTGAC
GACCTAGATCTGCTTCACCGTTTCGCTTTCTCGACGCTATCGCTCTCCGA
TCCTGTTCTCTGCCGCGCAAGTTTCGCAGGTCTTAAGGTTCGTTGTAGTT
TCAATTTTAATAATCCCCTGAAGAGTCATGGCTTCAAAGCGTATTTTGAA
GGAACTCAAGGATTTGCAGAAGGATCCTCCCACGTCTTGCAGCGCTGGCC
CTGTGGCTGAAGACATGTTCCACTGGCAAGCAACAATTATGGGCCCTTCT
GATAGCCCATATGCAGGAGGTGTATTTTTAGTTACCATTCATTTTCCTCC
TGATTATCCTTTCAAGCCCCCAAAGGTTGCTTTTAGGACCAAGGTCTTCC
ACCCCAAACATTCACAGCAATGGAAGCATCTGTCTTGATATCCTTTAAGA
AACAGTGGAGTCCAGCGCTTTACCATTTCAAAAGGTCCTGCTCTCTATCT
GGCTCCCTTGCTTAATGGATCCAAATCCTTGAAGAACCCTCCTGGTACCG
AAAAATGGCCCAAATGGAACAAAGTCCCAAAAAAGGCCAAAAAATGAATT
CCCCGGGCAGGAAACTGGGAAACAAAAAATATTGCCCAGGGAATAGAAGG
TTTGTTAGGAAATATGGGCAAAAAAAAAGGAACAAATTTATTTTAAAAAA
TTGTTGGGGGGGGGTTGCACATAATATATTTTTCTTTATATTTTGGTTTT
TGGGGAGAGGGGACAAAAGTGTGGGGGTTTTTAAAAAAAGGGGGTGGGGG
GGAAGATTCCACAGGGGGGGGGGGGAAAACGTTTATAATATGTTAAAGAG
CGATGAGAATGAGTGGGGGGGAGCGTTTTAAAAGAGCCACACATTTAAGA
GGGAGGAAAGAGGAGATATAAAAATGGAGTGATAATTCAAAAAAACTAAT
GTGGTATGTTAATAATAATAATTTATAAATAAAAAAAATATAAAAATAAA
AAAGAAAACAGAGGGAAGGGGAG
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