CV884346

Overview
NameCV884346
Unique NameCV884346
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: PP2C_LEICH (Protein phosphatase 2C OS=Leishmania chagasi PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.870e-21
Identity = 83/285 (29.12%), Postives = 127/285 (44.56%), Query Frame = 2
Query:   23 MGVYLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQ--LVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELC-DDDEFLVIACDGIWDCLFSQE 868
            MG+ L  P   +  E   N   R G + + G+R TMEDAH  Y  L  S  FFGV+DGH    V   C++YL +                A ++ +  + +       +ELA+  D+            W   G E                      S  T  VA+    +  L V N GDSR V    G  + L++DHKP+ E E+ RI    G ++  RV+GSL ++RA GD E+KL      E++++ A  D+   +   D ++F+++ CDG+++  F  E
Sbjct:    1 MGIPLPKPVMTQLQERYGNAIFRCGSNCVNGYRETMEDAHLTY--LTDSWGFFGVFDGH----VNDQCSQYLER----------------AWRSAIEKESIPMTDERMKELALRIDQE-----------WMDSGREGG--------------------STGTFFVALKEGNKVHLQVGNVGDSRVVACIDGVCVPLTEDHKPNNEGERQRIENCAGRVENNRVDGSLAVSRAFGDREYKLGSGSQLEQKVI-ALADVQHKDFTFDSNDFVLLCCDGVFEGNFPNE 231          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C32_ORYSJ (Probable protein phosphatase 2C 32 OS=Oryza sativa subsp. japonica GN=Os03g0292100 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.684e-20
Identity = 93/287 (32.40%), Postives = 126/287 (43.90%), Query Frame = 2
Query:   38 STPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDL--DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMR---GQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACV-AIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI----QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            S P+ E   EDG+   V Y        R  MED H A   L  D   +FFGV+DGHGGK                    SA + V      F+  +EM +   G  G  E A+    +                          T EE    +     SG   CV A+++   LVV+NAGD R VLSR G+A  L+ DH+   E E++RI   GGF+       RV GSL ++R IGD            KQ V ++PD +T+ +    EFL++A DG+WD + +QE
Sbjct:  117 SDPRNE-VEEDGEEFAV-YCRRGKGRRRVEMEDRHVAKVALGGDPKVAFFGVFDGHGGK--------------------SAAEFVAENMPKFMA-EEMCKVDGGDSGETEQAVKRCYLK-------------------------TDEEFLKRE----ESGGACCVTALLQKGGLVVSNAGDCRAVLSRAGKAEALTSDHRASREDERERIENLGGFVVNYRGTWRVQGSLAVSRGIGDAHL---------KQWVVSDPDTTTLGVDSQCEFLILASDGLWDKVENQE 342          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: PPM1E_RAT (Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm1e PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.751e-20
Identity = 78/268 (29.10%), Postives = 115/268 (42.91%), Query Frame = 2
Query:   98 LSSMQGWRATMEDAHAAYPDLD--------SSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            + +++  R  MED H   PD +           ++F V+DGHGG   A + + +LH  +++ E +   D   +  +AF   DE    Q+  RE                                                 G+T  V  IR   L VA  GDS+ +L RKGQA+ L K HKPD E EK RI   GG   +    RVNGSL+++RAIGD E          K  +  + D ++  L   +++L++ACDG +D +   E
Sbjct:  231 IHAIKNMRRKMEDKHVCIPDFNMLFNLEDQEEQAYFAVFDGHGGVDAAIYASVHLHVNLVRQEMFPH-DPAEALCRAFRVTDERFV-QKAARESL---------------------------------------------RCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAE---------HKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDE 442          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: PPM1E_MOUSE (Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.751e-20
Identity = 78/268 (29.10%), Postives = 115/268 (42.91%), Query Frame = 2
Query:   98 LSSMQGWRATMEDAHAAYPDLD--------SSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            + +++  R  MED H   PD +           ++F V+DGHGG   A + + +LH  +++ E +   D   +  +AF   DE    Q+  RE                                                 G+T  V  IR   L VA  GDS+ +L RKGQA+ L K HKPD E EK RI   GG   +    RVNGSL+++RAIGD E          K  +  + D ++  L   +++L++ACDG +D +   E
Sbjct:  231 IHAIKNMRRKMEDKHVCIPDFNMLFNLEDQEEQAYFAVFDGHGGVDAAIYASVHLHVNLVRQEMFPH-DPAEALCRAFRVTDERFV-QKAARESL---------------------------------------------RCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAE---------HKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDE 442          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: PPM1E_HUMAN (Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.751e-20
Identity = 79/268 (29.48%), Postives = 115/268 (42.91%), Query Frame = 2
Query:   98 LSSMQGWRATMEDAHAAYPDLD--------SSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            + +++  R  MED H   PD +           ++F V+DGHGG   A + + +LH  +++ E +   D   +  +AF   DE    Q+  RE                                                 G+T  V  IR   L VA  GDS+ +L RKGQA+ L K HKPD E EK RI   GG I      RVNGSL+++RAIGD E          K  +  + D ++  L   +++L++ACDG +D +   E
Sbjct:  245 IHAIKNMRRKMEDKHVCIPDFNMLFNLEDQEEQAYFAVFDGHGGVDAAIYASIHLHVNLVRQEMFPH-DPAEALCRAFRVTDERFV-QKAARESL---------------------------------------------RCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCIVWFGAWRVNGSLSVSRAIGDAE---------HKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDE 456          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C31_ARATH (Protein kinase and PP2C-like domain-containing protein OS=Arabidopsis thaliana GN=At2g40860/At2g40870 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.751e-20
Identity = 83/260 (31.92%), Postives = 119/260 (45.77%), Query Frame = 2
Query:  113 GWRATMEDAHAAYPDL--DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG----FIQVGRV-NGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQEL 871
            G R +MED H   P +  + S   F ++DGH G A A+F A+ L   V    + SAG+ ++   +AF+R D   R                                E + H     S+     D+H    G TA  +++ + +L VAN GDSR +L R G    LSK H      E++R++  GG     +   RV    L + R+IGD + K     PA    VTA P+IS   L  DDEFLV+A DG+WD +  +E+
Sbjct:  400 GRRESMEDTHFIIPHMCNEESIHLFAIFDGHRGAAAAEFSAQVLPGLVQSLCSTSAGEALS---QAFVRTDLAFRQ-------------------------------ELDSHRQ---SKRVSQKDWH---PGCTAIASLLVENKLFVANVGDSRAILCRAGHPFALSKAHLATCIDERNRVIGEGGRIEWLVDTWRVAPAGLQVTRSIGDDDLK-----PA----VTAEPEISETILSADDEFLVMASDGLWDVMNDEEV 610          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C08_ARATH (Probable protein phosphatase 2C 8 OS=Arabidopsis thaliana GN=At1g18030 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 8.356e-20
Identity = 88/285 (30.88%), Postives = 126/285 (44.21%), Query Frame = 2
Query:   62 SEDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSS------TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKG---------------QALNLSKDHKPDLEVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWD 850
            SE+ +   V   ++  +G R TMED     PD           + F +YDGHGG+  A+F  K+LH  VL     SAG                       REL  L  K+ K   ++EGF          D      S  G   D      G+TA    I D+++ VAN GD++ VL+R                 +A+ L+++HK     E+ RI K+GG I   GR+ G L ++RA GD  FK        K  V+A PDI   EL + + F+++ CDG+W+
Sbjct:   65 SEEKKEFLVEADVAEDKGARHTMEDVWVVLPDASLDFPGTLRCAHFAIYDGHGGRLAAEFAKKHLHLNVL-----SAGLP---------------------REL--LDVKVAK-KAILEGF-------RKTDELLLQKSVSGGWQD------GATAVCVWILDQKVFVANIGDAKAVLARSSTTNELGNHTEAGNPLKAIVLTREHKAIYPQERSRIQKSGGVISSNGRLQGRLEVSRAFGDRHFK--------KFGVSATPDIHAFELTERENFMILGCDGLWE 299          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C30_ARATH (Probable protein phosphatase 2C 30 OS=Arabidopsis thaliana GN=PP2C5 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.091e-19
Identity = 81/271 (29.89%), Postives = 117/271 (43.17%), Query Frame = 2
Query:   80 ENVRYGLSSMQGWRATMEDAHAAYPDLDSS----TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ----VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            E+  Y +   +G R  MED + A  D +       +FFGV+DGHGG   A+F A  L   +              A  A  R  E               D     S + EG+I +          +D+  E        G   G+    A+I   +L V+NAGD R V+SR G A  L+ DH P    E  RI   GG++     V R+ G+L ++R IGD            K+ V A P+  T+ +  + EFL++A DG+WD + +QE
Sbjct:  125 EDGYYSVYCKRGRRGPMEDRYFAAVDRNDDGGYKNAFFGVFDGHGGSKAAEFAAMNLGNNI-------------EAAMASARSGE---------------DGCSMESAIREGYIKTD---------EDFLKE--------GSRGGACCVTALISKGELAVSNAGDCRAVMSRGGTAEALTSDHNPSQANELKRIEALGGYVDCCNGVWRIQGTLAVSRGIGDRYL---------KEWVIAEPETRTLRIKPEFEFLILASDGLWDKVTNQE 341          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C67_ORYSJ (Probable protein phosphatase 2C 67 OS=Oryza sativa subsp. japonica GN=Os09g0314400 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.425e-19
Identity = 76/268 (28.36%), Postives = 120/268 (44.78%), Query Frame = 2
Query:  110 QGWRATMEDAHAAYPDLDSST------SFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKG---------------QALNLSKDHKPDLEVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIW 847
            +G R TMEDA    PD    +      + F +YDGHGG+  A++  K+LHQ V+          V +A+KA                             +IEGF             D+   +E    ++     G+TA    +  + +VVANAGD++ VL+R                 +A+ L+++HK     E+ RI KAGG +   GR+ G + ++RA+GD +FK        K  + A PD+ + E+   D F+++ CDG+W
Sbjct:   98 KGCRHTMEDAWVLLPDASMESPGNLRCAHFAIYDGHGGRLAAEYAQKHLHQNVIAAGLPRELMDVKAAKKA-----------------------------IIEGF----------RRTDECLLQESTKGNWQ---DGATAVCVWVLGQTVVVANAGDAKAVLARSTSADGEGAVDDAKSQLKAIVLTREHKAIFPQERARIQKAGGSVGPNGRLQGRIEVSRALGDRQFK--------KVGLIATPDVHSFEVTRKDHFIILGCDGLW 315          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C04_ORYSJ (Protein kinase and PP2C-like domain-containing protein OS=Oryza sativa subsp. japonica GN=Os01g0541900 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.175e-19
Identity = 84/268 (31.34%), Postives = 123/268 (45.90%), Query Frame = 2
Query:   92 YGLSSMQGWRATMEDAHAAYPDLDSSTSF--FGVYDGHGGKAVAKFCAKYLHQQVLKHEAY-SAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAG----GFIQVGRVN-GSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQEL 871
            +G  +  G R TMED H   P +        FG++DGH G A A+F  + +   + +  +  S  D +T   +AF+R D        +RE  IL  K    S  I    W P                           G TA  A+I   +L VANAGD R +L+R G+   +++DH      E++RI+K G      I   RV   +L + R+IGD + K     PA    VTA P++    L  DDEFLV+A DG+WD + ++++
Sbjct:  391 WGSFATCGRRETMEDTHFMLPHMSEEKDLHAFGIFDGHRGSAAAEFSVRAVPGFLKQFNSNTSPTDALT---EAFVRTDI------AFREELILHQK----SKRITQKNWHP---------------------------GCTAVTALIVRNKLFVANAGDCRAILNRAGEPFPMTRDHVASCPKERERIVKEGTEVKWQIDTWRVGAAALQVTRSIGDDDLK-----PA----VTAQPEVIETILSPDDEFLVMASDGLWDVMSNEDV 609          
The following BLAST results are available for this feature:
BLAST of CV884346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
PP2C_LEICH9.870e-2129.12Protein phosphatase 2C OS=Leishmania chagasi PE=2 ... [more]
P2C32_ORYSJ1.684e-2032.40Probable protein phosphatase 2C 32 OS=Oryza sativa... [more]
PPM1E_RAT3.751e-2029.10Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm... [more]
PPM1E_MOUSE3.751e-2029.10Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE... [more]
PPM1E_HUMAN3.751e-2029.48Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE... [more]
P2C31_ARATH3.751e-2031.92Protein kinase and PP2C-like domain-containing pro... [more]
P2C08_ARATH8.356e-2030.88Probable protein phosphatase 2C 8 OS=Arabidopsis t... [more]
P2C30_ARATH1.091e-1929.89Probable protein phosphatase 2C 30 OS=Arabidopsis ... [more]
P2C67_ORYSJ1.425e-1928.36Probable protein phosphatase 2C 67 OS=Oryza sativa... [more]
P2C04_ORYSJ3.175e-1931.34Protein kinase and PP2C-like domain-containing pro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G12_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T3_G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884346 ID=CV884346; Name=CV884346; organism=Citrus sinensis; type=EST; length=871bp
CTCTCTGCTCAAAGTAAAGAAAATGGGGGTATATCTGAGCACCCCCAAGA
CTGAGAAGTTCTCGGAGGATGGTCAAAATGAGAATGTTCGATATGGATTG
TCGTCGATGCAGGGGTGGCGTGCGACCATGGAAGATGCTCATGCAGCTTA
TCCAGATTTGGACAGTTCTACATCTTTCTTTGGTGTTTATGATGGCCACG
GTGGTAAAGCAGTGGCCAAATTTTGTGCCAAGTATCTTCACCAGCAGGTG
CTCAAACATGAAGCTTATTCAGCTGGAGATTTAGTCACTTCAGCACAGAA
AGCTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGGGGATGGAGAG
AATTAGCTATACTGGGAGATAAAATGGACAAGTTTTCTGGCATGATTGAG
GGGTTCATATGGTCTCCTAAGGGTGGTGAAGCCAATGATCATTTTGACGA
TTGGACATCGGAGGAGGGTCCTCACTCAGATTTTCATGGACCAACTTCTG
GAAGTACAGCTTGCGTAGCAATCATTAGAGACAAGCAACTCGTGGTTGCA
AATGCTGGTGATTCTCGTTGTGTGTTATCGAGGAAGGGCCAGGCACTTAA
TCTATCTAAAGACCATAAGCCTGATCTTGAGGTTGAGAAAGATAGAATTC
TCAAAGCTGGTGGTTTTATACAAGTTGGACGTGTTAATGGAAGTTTAAAT
TTGGCGAGAGCTATTGGAGATGTGGAGTTCAAGCTAAACAAAAGTTTGCC
TGCTGAAAAACAGATTGTGACTGCCAATCCTGATATAAGTACTATTGAAC
TTTGTGATGACGATGAGTTTCTTGTCATAGCTTGTGATGGGATTTGGGAT
TGCCTTTTCAGTCAAGAACTT
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