CV884346

Overview
NameCV884346
Unique NameCV884346
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: PPM1K_XENLA (Protein phosphatase 1K, mitochondrial OS=Xenopus laevis GN=ppm1k PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.073e-19
Identity = 81/268 (30.22%), Postives = 123/268 (45.90%), Query Frame = 2
Query:   89 RYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDK-QLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGR--VNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL-CDDDEFLVIACDGIWDCLFSQEL 871
            + G S+  G R   ED       L     +F VYDGHGG + A+FC +++   +                                +E  +    M+K   +++ F+   K    + H            D    T G+TA VA++RD  +LVVA+ GDSR +L R+G+   L+ DH P+ + EK RI K+GGF+    +G+  VNG L + R+IGD++ K           V A P+   ++L   DD FLV+  DGI   + SQE+
Sbjct:   95 KVGCSTQLGKRKENEDRFKL-ARLTPDILYFAVYDGHGGASAAEFCDRFMEDYI--------------------------------KEFLVEEHDMEKV--LVKAFLEINKAFARHAHLS---------VDASLLTCGTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNVNGRLAMTRSIGDLDLK--------SMGVIAEPETKRVKLQHTDDGFLVLTTDGINFIVNSQEI 310          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C77_ORYSJ (Probable protein phosphatase 2C 77 OS=Oryza sativa subsp. japonica GN=Os12g0198200 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.073e-19
Identity = 81/269 (30.11%), Postives = 124/269 (46.10%), Query Frame = 2
Query:   98 LSSMQGWRATMEDAHAAYP----DLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVL-SRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVG-----RVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDE--FLVIACDGIWDCLFSQE 868
            L+S +G R  MED +        +  S  +F+GVYDGHGG+A   F A  L + V+   A +A   ++  Q A        R +          ++ D  + +   ++ +           ++ S+        G   G+ A  A+++D +L V+N GD R VL SR G A  L+ DH P  E E+ RI   GG++  G     RV  SL ++RA GD            KQ VT  P+ + + L  D +  FLV+A DG+W  + +QE
Sbjct:  140 LASRRGVRHAMEDGYGVITRHKIEGGSQLAFYGVYDGHGGRAAVDFVADKLGKNVVT--AAAAATTMSRHQAAGSSSPSQQRRE----------EEDDVTAAIRAAYLTTDS---------EFLSQ--------GVRGGACAATALVKDGELYVSNVGDCRAVLGSRGGVATALTSDHTPGREDERLRIESTGGYVSCGGSGVWRVQDSLAVSRAFGDA---------GVKQWVTCEPETARVSLAADGDCRFLVLASDGLWCKVSNQE 370          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: SPNA_DICDI (Protein spalten OS=Dictyostelium discoideum GN=spnA PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.576e-18
Identity = 74/282 (26.24%), Postives = 111/282 (39.36%), Query Frame = 2
Query:   71 GQNENVRYGLSSMQGWRATMEDAHAAY-----------PDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALN-----------LSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWD 850
            G    +  G  S+QG R  MED H              P  D   S++ VYDGHGG   +      +H  ++  +++  GD   + + A+   D+            I+ +K +K                                      SGST   A++   +L  AN GDS  VL+R     N           LS  H    + EK R+   GG I   R+ GSL ++R+ GD E+K       EK+   ++P  +T +L   D F ++ACDG+WD
Sbjct:  698 GSKIKLESGFGSLQGRRKNMEDTHVILNNLMGAVTYNGPPKDIPISYYAVYDGHGGTETSTLLEPTVHNCLVNSQSFRDGDYEQAFRDAYAEADD------------IVIEKCEK--------------------------------------SGSTGVSALLVGNKLYTANVGDSEIVLARAQPNANPKGPVTYEPVLLSYKHLASDDQEKKRVTDLGGMIIFNRLFGSLAVSRSFGDKEYK-----EGEKKFCVSDPYQTTTDLTARDHFFILACDGLWD 924          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: PPM1F_RAT (Protein phosphatase 1F OS=Rattus norvegicus GN=Ppm1f PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.511e-18
Identity = 72/269 (26.77%), Postives = 119/269 (44.24%), Query Frame = 2
Query:   98 LSSMQGWRATMEDAHAAYPDLDS--------STSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV---GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQEL 871
            + +++  R  MED H + P  +           ++F V+DGHGG   A++ + ++H     H+     D   + ++AF   D+M   Q+  RE                                                SG+T   A+I    L VA  GDS+ +L ++GQ + L + HKP+ + EK RI   GGF+ +    RVNG+L ++RAIGDV          +K  V+   D ++ EL   +++L++ACDG +D +   E+
Sbjct:  155 IHAIRNTRRKMEDRHVSLPAFNHLFGLSDSVHRAYFAVFDGHGGVDAARYASVHVHTNA-SHQPELLTDPAAALKEAFRHTDQMFL-QKAKRERL---------------------------------------------QSGTTGVCALITGAALHVAWLGDSQVILVQQGQVVKLMEPHKPERQDEKSRIEALGGFVSLMDCWRVNGTLAVSRAIGDV---------FQKPYVSGEADAASRELTGLEDYLLLACDGFFDVVPHHEI 367          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: PPM1K_PONAB (Protein phosphatase 1K, mitochondrial OS=Pongo abelii GN=PPM1K PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.988e-18
Identity = 81/266 (30.45%), Postives = 120/266 (45.11%), Query Frame = 2
Query:   80 ENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDK-QLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGR--VNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL----CDDDEFLVIACDGIW 847
            ENV  G +S  G R   ED    +  L     +F VYDGHGG A A FC  ++ + ++        +L T    AFL +D+                                           ++S     +D    TSG+TA VA++RD  +LVVA+ GDSR +L RKG+ + L+ DH P+ + EK+RI K GGF+    +G+  VNG L + R+IGD++ K +         V A P+   I+      +D+   V+   G W
Sbjct:   93 ENV--GCASQIGKRKENEDRFD-FAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEK-NLETLLTLAFLEIDKA------------------------------------------FSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSG--------VIAEPETKRIKAIQYGTEDNSTAVVVPFGAW 304          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C74_ORYSJ (Probable protein phosphatase 2C 74 OS=Oryza sativa subsp. japonica GN=Os11g0242200 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.988e-18
Identity = 84/293 (28.67%), Postives = 119/293 (40.61%), Query Frame = 2
Query:   53 EKFSEDGQN-ENVRYGLSSMQGWRATMEDAHAAYP---DLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVL----------KHEAYSAGDLVTSA-QKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVG-----RVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDD-EFLVIACDGIWDCLFSQE 868
            EK  E+    E   + ++S +G R  MED +       +  S  +F+GVYDGHGG+A   F A  L   V+          K  + +A D V +A + A+L  D     Q                                                  G   G+ A  A++ D  L VAN GD R V+SR G A  L+ DH P  + E+ RI  +GG++  G     RV   L + R+ GD            K+ V A P++S   L     EFLVIA DG+W+ + +QE
Sbjct:  120 EKEEEEAMEVEGEGFWVASRRGLRHAMEDGYGVITHKIEGHSQMAFYGVYDGHGGRAAVDFVAGRLGNNVVAAAEKQRLSEKASSPAAADHVAAAIRAAYLATDSEFLSQ--------------------------------------------------GTRGGACAATALVIDGDLYVANLGDCRAVISRHGAAAALTSDHTPARDDERSRIESSGGYVSCGSNGVWRVQDCLAVTRSFGD---------GGLKRWVVAEPEVSRTPLAGAGCEFLVIASDGLWNKVSNQE 353          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C37_ORYSJ (Probable protein phosphatase 2C 37 OS=Oryza sativa subsp. japonica GN=Os04g0167900 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.988e-18
Identity = 96/309 (31.07%), Postives = 127/309 (41.10%), Query Frame = 2
Query:   86 VRYGLSSMQGWRATMEDAHAAYPD----LDSSTS-FFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFS-GMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHK----------------------------------------PDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            V +G  S+ G    MEDA +  P     LD S   FF V+DGHGG  V+  C + +H  V       A ++V  A+ A LR  +    +    E A+ G  + +   G   G      GG              P S   G   GSTA VA++   +LVV+N GDSR VL R G  L LS DHK                                        PD   EK RI   GG   ++   RV G L ++RA+GD      K L  E   V   PDI+      DDE L++A DG+WD + ++
Sbjct:  112 VAFGSVSLAGRMRDMEDAVSLRPSFCTWLDGSPMHFFAVFDGHGGPHVSALCREQMHVIV-------AEEMV--AEAAALRQRQPAAMEEEEEERAVAGGAVAELRPGGRAG------GGGVRVRARHRAGVPCPLSGQTGAIIGSTAVVALLVRDRLVVSNCGDSRAVLCRAGDPLPLSSDHKGLNPSLSWRGTRVALARGTWGDKTGQSVGPAALLLSGGAHPDRPDEKARIEAVGGRVVYLNGPRVRGILAMSRALGD------KYLKPE---VICEPDITITVRTVDDECLILASDGMWDVISNE 396          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C05_ORYSJ (Probable protein phosphatase 2C 5 OS=Oryza sativa subsp. japonica GN=Os01g0552300 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.988e-18
Identity = 78/296 (26.35%), Postives = 131/296 (44.26%), Query Frame = 2
Query:   62 SEDGQNENVRYGLSSMQGWRATMEDAHAAYP-DLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRC-VLSRKGQALNLSKDHKP------DLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEK-------------------QIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            S   + E +R+G + +QG R  MED     P  L    SF  V+DGH G +  +F    L+++     A   G ++++                  + L  + D + +    ++             +   W  +     +     SG+TA    +R+  LVV++ GDS   V+SR G+   ++  H+P       LE E  RI  AGG+I  GR+ G ++++RA GD+ FK  K+    K                    ++ ++PD+S +EL  D EF+++A DG+WD + S E
Sbjct:   48 SSSSELEAIRWGTAKLQGARDEMEDEVVLRPGSLLDGFSFAAVFDGHAGFSAVEFLRDELYKECAA--ALDGGAVLST------------------KNLDAITDSIQRAFATVDA------------NLSTWLEQMDKEDE-----SGATATAMFLRNDVLVVSHIGDSCLQVVSRGGRPQAVTNFHRPYGNKKASLE-EVKRIRAAGGWIVDGRICGEISVSRAFGDIRFKTRKNEMLVKGVKEGRWTEKFISRINFKGDLIVSSPDVSLVELGPDVEFVLLATDGLWDYIKSSE 305          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: PPM1F_HUMAN (Protein phosphatase 1F OS=Homo sapiens GN=PPM1F PE=1 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 1.021e-17
Identity = 70/269 (26.02%), Postives = 117/269 (43.49%), Query Frame = 2
Query:   98 LSSMQGWRATMEDAHAAYPDLDS--------STSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQEL 871
            + +++  R  MED H + P  +         + ++F V+DGHGG   A++ A ++H    +       D   + ++AF R D+M   +     L                                               SG+T   A+I    L VA  GDS+ +L ++GQ + L + H+P+ + EK RI   GGF+      RVNG+L ++RAIGDV          +K  V+   D ++  L   +++L++ACDG +D +  QE+
Sbjct:  159 IHAIRNTRRKMEDRHVSLPSFNQLFGLSDPVNRAYFAVFDGHGGVDAARYAAVHVHTNAARQPELPT-DPEGALREAFRRTDQMFLRKAKRERLQ----------------------------------------------SGTTGVCALIAGATLHVAWLGDSQVILVQQGQVVKLMEPHRPERQDEKARIEALGGFVSHMDCWRVNGTLAVSRAIGDV---------FQKPYVSGEADAASRALTGSEDYLLLACDGFFDVVPHQEV 371          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C10_ARATH (Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.334e-17
Identity = 86/286 (30.07%), Postives = 130/286 (45.45%), Query Frame = 2
Query:   38 STPKTEKFSEDGQNENVRYGLSSMQGW-RATMEDAHAA-YPDLDSST-SFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRD-KQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI-----QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            ST   +  + DG+   +++G S ++G     MED H + +  +D +    F +YDGH G+ V  +  K+L   +LK E +   D   S   A+ + D+           AIL    D   G                                    GSTA  AI+ + ++L VAN GDSR VLS+ GQA+ ++ DH+P    E+  I   GGF+      V RVNG L ++RA GD      KSL   K  + ++PD+    + D  + LV+A DG+W  + +QE
Sbjct:   20 STSSGKGRNNDGE---IKFGYSLVKGKANHPMEDYHVSKFVKIDGNELGLFAIYDGHLGERVPAYLQKHLFSNILKEEQFRY-DPQRSIIAAYEKTDQ-----------AILSHSSDLGRG------------------------------------GSTAVTAILMNGRRLWVANVGDSRAVLSQGGQAIQMTIDHEP--HTERLSIEGKGGFVSNMPGDVPRVNGQLAVSRAFGD------KSL---KTHLRSDPDVKDSSIDDHTDVLVLASDGLWKVMANQE 243          
The following BLAST results are available for this feature:
BLAST of CV884346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
PPM1K_XENLA7.073e-1930.22Protein phosphatase 1K, mitochondrial OS=Xenopus l... [more]
P2C77_ORYSJ7.073e-1930.11Probable protein phosphatase 2C 77 OS=Oryza sativa... [more]
SPNA_DICDI1.576e-1826.24Protein spalten OS=Dictyostelium discoideum GN=spn... [more]
PPM1F_RAT3.511e-1826.77Protein phosphatase 1F OS=Rattus norvegicus GN=Ppm... [more]
PPM1K_PONAB5.988e-1830.45Protein phosphatase 1K, mitochondrial OS=Pongo abe... [more]
P2C74_ORYSJ5.988e-1828.67Probable protein phosphatase 2C 74 OS=Oryza sativa... [more]
P2C37_ORYSJ5.988e-1831.07Probable protein phosphatase 2C 37 OS=Oryza sativa... [more]
P2C05_ORYSJ5.988e-1826.35Probable protein phosphatase 2C 5 OS=Oryza sativa ... [more]
PPM1F_HUMAN1.021e-1726.02Protein phosphatase 1F OS=Homo sapiens GN=PPM1F PE... [more]
P2C10_ARATH1.334e-1730.07Probable protein phosphatase 2C 10 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G12_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T3_G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884346 ID=CV884346; Name=CV884346; organism=Citrus sinensis; type=EST; length=871bp
CTCTCTGCTCAAAGTAAAGAAAATGGGGGTATATCTGAGCACCCCCAAGA
CTGAGAAGTTCTCGGAGGATGGTCAAAATGAGAATGTTCGATATGGATTG
TCGTCGATGCAGGGGTGGCGTGCGACCATGGAAGATGCTCATGCAGCTTA
TCCAGATTTGGACAGTTCTACATCTTTCTTTGGTGTTTATGATGGCCACG
GTGGTAAAGCAGTGGCCAAATTTTGTGCCAAGTATCTTCACCAGCAGGTG
CTCAAACATGAAGCTTATTCAGCTGGAGATTTAGTCACTTCAGCACAGAA
AGCTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGGGGATGGAGAG
AATTAGCTATACTGGGAGATAAAATGGACAAGTTTTCTGGCATGATTGAG
GGGTTCATATGGTCTCCTAAGGGTGGTGAAGCCAATGATCATTTTGACGA
TTGGACATCGGAGGAGGGTCCTCACTCAGATTTTCATGGACCAACTTCTG
GAAGTACAGCTTGCGTAGCAATCATTAGAGACAAGCAACTCGTGGTTGCA
AATGCTGGTGATTCTCGTTGTGTGTTATCGAGGAAGGGCCAGGCACTTAA
TCTATCTAAAGACCATAAGCCTGATCTTGAGGTTGAGAAAGATAGAATTC
TCAAAGCTGGTGGTTTTATACAAGTTGGACGTGTTAATGGAAGTTTAAAT
TTGGCGAGAGCTATTGGAGATGTGGAGTTCAAGCTAAACAAAAGTTTGCC
TGCTGAAAAACAGATTGTGACTGCCAATCCTGATATAAGTACTATTGAAC
TTTGTGATGACGATGAGTTTCTTGTCATAGCTTGTGATGGGATTTGGGAT
TGCCTTTTCAGTCAAGAACTT
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