CV884346

Overview
NameCV884346
Unique NameCV884346
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: CYAA_USTMA (Adenylate cyclase OS=Ustilago maydis GN=UAC1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14
Identity = 80/292 (27.40%), Postives = 132/292 (45.21%), Query Frame = 2
Query:   65 EDGQNENVRYGLSSMQGWRATMEDAHAAYPDL------------DSSTSFFGVYDGHG-----GKAVAKFCAKY----LHQQVLKHEAYSAGDLVT---SAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEAN-DHFDDWTSEEGPH----SDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNL-SKDHKPDLEVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIW 847
            ++  N  VR  LS + G    + DA   + +L            D     FG++DG G     G  +A   A++    L  +  KH+     + V+   + ++AFLR+      Q+ + + A++ D   K S             EA+ +   D T    P     S+ H   +G++A +A + D  L +ANAGD+  V+SR G   +L S  H+P    E +RI  A G++ + G VN  L+++R+ G               IV A P ++T++L D DEF++IA   +W
Sbjct: 1692 DESDNRRVRTSLSQVNGMAYGIADALGKHDNLSVIDLVIPTFRKDEGECIFGLFDGRGHGAHVGSRIAHHLAEWSGHRLSWEFQKHQNEMTAEPVSVPDALRRAFLRL------QKDYAD-ALINDGSRKLS-------------EAHAEAAADVTRSSAPAIAAASNKHDWRAGASAILAYVVDHTLYIANAGDALAVMSRNGGTAHLISNKHEPFDRAEIERIRSAEGWVSLRGYVNDMLDVSRSFGYFHL---------FPIVNAAPAVTTVQLTDSDEFVIIANRTLW 1954          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C15_ARATH (Probable protein phosphatase 2C 15 OS=Arabidopsis thaliana GN=At1g68410 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.948e-14
Identity = 73/253 (28.85%), Postives = 113/253 (44.66%), Query Frame = 2
Query:  161 DSSTSF--FGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQAL-NLSKDHK-PDLEVEKDRILKAGGFIQVGRVN--------------GSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            +SST+F  F V+DGH GKA A     Y  + +L H        V SA  + L  DE +                     ++ GF+ + K  ++                  G TSG+TA   I+    + VA  GDSRC+L  KG ++ NL+ DH+  D   E++R+  +GG  +VGR++              G L L+R+IGD++           + +   P +  ++L +    L+IA DGIWD L S+
Sbjct:   66 NSSTAFSVFAVFDGHNGKAAAV----YTRENLLNH--------VISALPSGLSRDEWLHALP---------------RALVSGFVKTDKEFQSR-----------------GETSGTTATFVIVDGWTVTVACVGDSRCILDTKGGSVSNLTVDHRLEDNTEERERVTASGG--EVGRLSIVGGVEIGPLRCWPGGLCLSRSIGDMDV---------GEFIVPVPFVKQVKLSNLGGRLIIASDGIWDALSSE 263          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C75_ORYSJ (Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.169e-13
Identity = 81/283 (28.62%), Postives = 124/283 (43.82%), Query Frame = 2
Query:   98 LSSMQGWRATMEDAHAAYPDLD--SSTSFFGVYDGHG--GKAVAKFCAKYLHQQVLKHEAYSAGDLVTS-AQKAFLRMDEMMRGQRGWRELAILGDK--MDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQ-----ALNLSKDHKPDLEVEKDRILKAGGFI-------QVGRV------NGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQEL 871
            L + QG + T +DA  A+ + +  S T F GV+DGHG  G  +A+     L  ++        GD  TS +  + L  +         R   + G K   + F+ M E F            F +   E     +     SG+TA   I +   L+V N GDSR VL  + Q     A  L+ D KPD   E  RI +  G +        V R+      +  L +ARA GD   K       +  +++  PD++  ++ + DEF+V+A DG+WD L +QE+
Sbjct:   47 LFTRQGKKGTNQDAMVAWENYNGRSDTVFCGVFDGHGPHGHLIARKVRDILPSRLCDLIYEDCGDSPTSNSDVSTLEENLSPYADAECRSPTLAGQKEHQEFFNAMKESF---------RKAFKNVDKELKLQRNIDSICSGTTAVTLIKQGHDLIVGNLGDSRAVLGTRDQNDKLVAHQLTVDLKPDHPREARRIRRCNGRVFAHQDEPDVARLWLPNCNSPGLAMARAFGDFCLK-------DFGLISV-PDVTYRQITEKDEFIVLATDGVWDVLSNQEV 312          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C12_ORYSJ (Probable protein phosphatase 2C 12 OS=Oryza sativa subsp. japonica GN=Os02g0224100 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.526e-13
Identity = 67/253 (26.48%), Postives = 107/253 (42.29%), Query Frame = 2
Query:  176 FFGVYDGHG--GKAVAKFCAKYLHQQVLKHE-AYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKG-----QALNLSKDHKPDLEVEKDRILKAGGFI-------------QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQEL 871
            F GV+DGHG  G+ ++K    YL   +L H  A    D            D+              G+   + S      +           F     E     +     SG+TA  AI + + L++AN GDSR VL+        QA+ L+ DHKP +  E  RI ++GG +               G  +  L +AR++GD+  K +  +PA        P++++  +   D F+V+A DG+WD L ++E+
Sbjct:   72 FCGVFDGHGRCGQFISKLVRDYLPFMILSHRNALLLADAAADDDDDAAFSDDAAASSSADSS----GNSSPQPSASASAQMLEEWRQACASAFAAMDGELKLQPNLDCAFSGTTAVCAIKQGRDLIIANLGDSRAVLATMSDTGYLQAVQLTVDHKPSVPEEAARIKRSGGRVFGLKDEPGVMRVWLPGENSPGLAMARSLGDMRLKRHGVIPA--------PEVTSRRVTGADLFMVLATDGVWDVLSNEEV 312          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C66_ORYSJ (Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.993e-13
Identity = 80/280 (28.57%), Postives = 124/280 (44.29%), Query Frame = 2
Query:   98 LSSMQGWRATMEDAHAAYPDLDSSTSFF-GVYDGHG--GKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGF--IWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSK-----DHKPDLEVEKDRILKAGGFI-------QVGRV------NGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            L + QG + T +DA   + + ++S S F GV+DGHG  G  VAK     L  ++      SA +  +S Q   +       G     E  ++ D+  +++   E    ++ P        F     E   H       SGSTA   + +   LVV N GDSR ++  +  A NL+      D KP+L  E  RI +  G +       +V RV      +  L +ARA GD   K       +  +++  P IS   L + DEF+++A DG+WD L ++E
Sbjct:   91 LHTQQGRKGTNQDAMVVWENFNTSDSVFCGVFDGHGPYGHFVAKKVRDSLPVKIRTLWKTSANEDTSSHQNGSIS------GSVNSEESPVVDDEWGEYADDSEKLPEMFLPLKQSYFKAFKLMDKELKMHPTVDCFCSGSTAVTLVKQGLDLVVGNLGDSRAIMGTRDAANNLTAVQLTVDLKPNLPREAARIQQCRGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLK-------DYGLISV-PQISYRRLTEKDEFIILATDGVWDVLSNKE 356          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C76_ORYSJ (Putative protein phosphatase 2C 76 OS=Oryza sativa subsp. japonica GN=Os11g0586100 PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.575e-13
Identity = 80/291 (27.49%), Postives = 128/291 (43.99%), Query Frame = 2
Query:  185 VYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKF----SGMIEGFIWS-PKGGEANDHFD-------------DWT-SEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLS--------------------RKGQALN------------------LSKDHKPDLEVEKDRILKAGGFI----QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIE-LCDDDEFLVIACDGIWDCLFSQEL 871
            V+DGH G   ++  +K L +  L H  Y   D + S       M     G+  ++E+ IL + ++ +    S   +G  W+ P   + + H +             D T S+E   ++F    SGSTA V +I D Q++ AN GDS+  L                     RK  + N                  L+KDH PD E E+ R+  AGG++     V RVNG L L+RAIGDV +K    +P         P+++  + L  +D FL+ + DG+++ +  Q++
Sbjct:  136 VFDGHNGAEASEMASKLLLEYFLLH-VYFLLDGIYSI------MFRKSTGKLTYKEVTILNNVINLYKEDQSSHSKGSCWALPAILDRSFHMEVLKESLLRAVHDVDLTFSKEALRNNFE---SGSTAAVILIVDGQIIAANVGDSKAFLCSESHDSSIDKKTSVVSGKRRRKRNSNNRDDFALANYDGPFYNVKELTKDHHPDREDERSRVEAAGGYVLEWAGVHRVNGELALSRAIGDVPYKRYGVIP--------TPELTEWQSLSANDTFLIASSDGVFEKMTMQDV 408          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C06_ARATH (Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.893e-13
Identity = 79/279 (28.32%), Postives = 119/279 (42.65%), Query Frame = 2
Query:   98 LSSMQGWRATMEDAHAAYPDL--DSSTSFFGVYDGHG--GKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQ-----ALNLSKDHKPDLEVEKDRILKAGGFI-------QVGRV------NGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            L + QG + T +DA   + +    S T   GV+DGHG  G  V+K     L    L  +  +      S+ K  L        +  W EL +       F  M     + P              E   H   +   SG+T+   I + K LVV N GDSR VL+ + Q     A+ L+ D KPDL  E  RI +  G +       +V RV      +  L +ARA GD   K       +  +++  PDI+   L + D+++++A DG+WD L ++E
Sbjct:   67 LYTQQGKKGTNQDAMLVWENFCSRSDTVLCGVFDGHGPFGHMVSKRVRDML-PFTLSTQLKTTSGTEQSSSKNGLNSAPTCVDEEQWCELQLCEKDEKLFPEM-----YLPLKRALLKTCQQMDKELKMHPTINCFCSGTTSVTVIKQGKDLVVGNIGDSRAVLATRDQDNALVAVQLTIDLKPDLPSESARIHRCKGRVFALQDEPEVARVWLPNSDSPGLAMARAFGDFCLK-------DYGLISV-PDINYHRLTERDQYIILATDGVWDVLSNKE 331          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C33_ARATH (Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.688e-12
Identity = 86/299 (28.76%), Postives = 130/299 (43.48%), Query Frame = 2
Query:  104 SMQGWRATMEDAHAAYPDLDSSTS--FFGVYDGHG--GKAVAK-------------FCAKYLHQQVLKHEAYSAGDLVTS--------AQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQ-----ALNLSKDHKPDLEVEKDRILKAGGFI-------QVGRV------NGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQEL 871
            + QG +   +DA   + +  S T   F GV+DGHG  G  VAK             + AK   + VLK       + VT+        A  AF+  +E  R      E      + + F  + E F+ + K  +    F         H       SG+TA   I + + LVV N GDSR V+  +       A+ L+ D KP+L  E +RI K  G +       +V RV      +  L +ARA GD   K       +  +++  PD+S  +L + DEF+V+A DGIWD L ++++
Sbjct:   69 TQQGKKGPNQDAMVVWENFGSRTDTIFCGVFDGHGPYGHMVAKRVRDNLPLKLSAYWEAKVPVEGVLKAITTDTVNNVTNINNPEDAAAAAAFVTAEEEPRTSADMEE-ENTETQPELFQTLKESFLKAFKVMDRELKF---------HGSVDCFCSGTTAVTLIKQGQYLVVGNVGDSRAVMGTRDSENTLVAVQLTVDLKPNLPAEAERIRKCRGRVFALRDEPEVCRVWLPNCDSPGLAMARAFGDFCLK-------DFGLISV-PDVSFRQLTEKDEFIVLATDGIWDVLSNEDV 349          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C05_ARATH (Probable protein phosphatase 2C 5 OS=Arabidopsis thaliana GN=At1g09160 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.204e-12
Identity = 74/287 (25.78%), Postives = 121/287 (42.16%), Query Frame = 2
Query:   62 SEDGQNENVRYGLSSM----QGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALN-LSKDHKPDLEV-EKDRILKAGGFIQVGRVN--------------GSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFS 862
            SE  +   V+YG +++    + +     D      D  S+ S FG++DGH G + A +  ++L + V+            SA       DE ++                    ++ GF+      + +  F              G TSG+T    II    + VA+ GDSRC+L  +G  ++ L+ DH+ +  V E++RI  +GG  +VGR+N              G L L+R+IGD +           + +   P +  ++L D    L+IA DGIWD L S
Sbjct:   26 SEKVEKPFVKYGQAALAKKGEDYFLIKTDCERVPGDPSSAFSVFGIFDGHNGNSAAIYTKEHLLENVV------------SAIPQGASRDEWLQALP---------------RALVAGFV------KTDIEFQQ-----------KGETSGTTVTFVIIDGWTITVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERITASGG--EVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDV---------GEFIVPIPHVKQVKLPDAGGRLIIASDGIWDILSS 257          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C01_ARATH (Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana GN=PPC6-6 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.878e-12
Identity = 77/277 (27.80%), Postives = 119/277 (42.96%), Query Frame = 2
Query:  104 SMQGWRATMEDAHAAYPD-LDSSTSFFGVYDGHG--GKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQ-----ALNLSKDHKPDLEVEKDRILKAGGFI-------QVGRV------NGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQEL 871
            + QG +   +DA   + D +    +F GV+DGHG  G  VA+     L  ++L     S  + + S Q   +       G R  +  ++  +K +        F+W     ++   F+    E   H +     SG TA   I +   L + N GDSR +L  K       A+ L+ D KPDL  E +RI +  G +       +V RV         L +ARA GD   K           V + P+ S   L D D+F+V+A DG+WD L ++E+
Sbjct:   65 TQQGRKGINQDAMIVWEDFMSKDVTFCGVFDGHGPHGHLVARKVRDSLPVKLL-----SLLNSIKSKQNGPI-------GTRASKSDSLEAEKEESTEEDKLNFLWEEAFLKS---FNAMDKELRSHPNLECFCSGCTAVTIIKQGSNLYMGNIGDSRAILGSKDSNDSMIAVQLTVDLKPDLPREAERIKQCKGRVFALQDEPEVSRVWLPFDNAPGLAMARAFGDFCLK--------DYGVISIPEFSHRVLTDRDQFIVLASDGVWDVLSNEEV 318          
The following BLAST results are available for this feature:
BLAST of CV884346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CYAA_USTMA4.017e-1427.40Adenylate cyclase OS=Ustilago maydis GN=UAC1 PE=3 ... [more]
P2C15_ARATH8.948e-1428.85Probable protein phosphatase 2C 15 OS=Arabidopsis ... [more]
P2C75_ORYSJ1.169e-1328.62Probable protein phosphatase 2C 75 OS=Oryza sativa... [more]
P2C12_ORYSJ1.526e-1326.48Probable protein phosphatase 2C 12 OS=Oryza sativa... [more]
P2C66_ORYSJ1.993e-1328.57Probable protein phosphatase 2C 66 OS=Oryza sativa... [more]
P2C76_ORYSJ7.575e-1327.49Putative protein phosphatase 2C 76 OS=Oryza sativa... [more]
P2C06_ARATH9.893e-1328.32Probable protein phosphatase 2C 6 OS=Arabidopsis t... [more]
P2C33_ARATH1.688e-1228.76Probable protein phosphatase 2C 33 OS=Arabidopsis ... [more]
P2C05_ARATH2.204e-1225.78Probable protein phosphatase 2C 5 OS=Arabidopsis t... [more]
P2C01_ARATH2.878e-1227.80Probable protein phosphatase 2C 1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G12_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T3_G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884346 ID=CV884346; Name=CV884346; organism=Citrus sinensis; type=EST; length=871bp
CTCTCTGCTCAAAGTAAAGAAAATGGGGGTATATCTGAGCACCCCCAAGA
CTGAGAAGTTCTCGGAGGATGGTCAAAATGAGAATGTTCGATATGGATTG
TCGTCGATGCAGGGGTGGCGTGCGACCATGGAAGATGCTCATGCAGCTTA
TCCAGATTTGGACAGTTCTACATCTTTCTTTGGTGTTTATGATGGCCACG
GTGGTAAAGCAGTGGCCAAATTTTGTGCCAAGTATCTTCACCAGCAGGTG
CTCAAACATGAAGCTTATTCAGCTGGAGATTTAGTCACTTCAGCACAGAA
AGCTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGGGGATGGAGAG
AATTAGCTATACTGGGAGATAAAATGGACAAGTTTTCTGGCATGATTGAG
GGGTTCATATGGTCTCCTAAGGGTGGTGAAGCCAATGATCATTTTGACGA
TTGGACATCGGAGGAGGGTCCTCACTCAGATTTTCATGGACCAACTTCTG
GAAGTACAGCTTGCGTAGCAATCATTAGAGACAAGCAACTCGTGGTTGCA
AATGCTGGTGATTCTCGTTGTGTGTTATCGAGGAAGGGCCAGGCACTTAA
TCTATCTAAAGACCATAAGCCTGATCTTGAGGTTGAGAAAGATAGAATTC
TCAAAGCTGGTGGTTTTATACAAGTTGGACGTGTTAATGGAAGTTTAAAT
TTGGCGAGAGCTATTGGAGATGTGGAGTTCAAGCTAAACAAAAGTTTGCC
TGCTGAAAAACAGATTGTGACTGCCAATCCTGATATAAGTACTATTGAAC
TTTGTGATGACGATGAGTTTCTTGTCATAGCTTGTGATGGGATTTGGGAT
TGCCTTTTCAGTCAAGAACTT
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