CV884346

Overview
NameCV884346
Unique NameCV884346
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: PPMBL_HUMAN (Probable protein phosphatase 1B-like OS=Homo sapiens PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.052e-30
Identity = 87/261 (33.33%), Postives = 127/261 (48.66%), Query Frame = 2
Query:   86 VRYGLSSMQGWRATMEDAHAAY---PDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKH---EAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWD 850
            +R+G S+ QGWRA MEDAH  +   P L    + F V DGHGG   A+F A++L   VL+    E      +  + ++AFL  DE +R                                        W   E         T G TA V ++  + L +A+ GDSR VLSR G     ++DH+P    E++RI  AGG I+  RV GSL ++RA+GD  +K     P E Q+V+A P+++ +    +DEF+++A DG+WD
Sbjct:   65 LRFGASAAQGWRARMEDAHCTWLSLPGLPPGWALFAVLDGHGGARAARFGARHLPGHVLQELGPEPSEPEGVREALRRAFLSADERLRSL--------------------------------------WPRVE---------TGGCTAVVLLVSPRFLYLAHCGDSRAVLSRAGAVAFSTEDHRPLRPRERERIHAAGGTIRRRRVEGSLAVSRALGDFTYKEAPGRPPELQLVSAEPEVAALARQAEDEFMLLASDGVWD 278          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C49_ORYSJ (Probable protein phosphatase 2C 49 OS=Oryza sativa subsp. japonica GN=Os05g0457200 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.998e-30
Identity = 101/271 (37.27%), Postives = 135/271 (49.82%), Query Frame = 2
Query:   89 RYGLSSMQGWRATMEDAHAAYPD-LDSSTS-----FFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILG-DKMDKFSGMIEGFIW--SPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            RYG++S+ G R  MEDA +  PD L  STS     FFGV+DGHG   VA+ C   +H+            LV  A K  +   E       W+++   G  +MD      E  IW  S  GGE     +  T     H        GSTA VA++   ++VVAN+GDSR VL R G  + LS DHKPD   E +RI  AGG   +    RV G L ++RAIGD            K  VT+ P+++  E  DDDE L++A DG+WD + ++
Sbjct:   91 RYGVTSVFGRRREMEDAVSIRPDFLRGSTSSGKHHFFGVFDGHGCSHVARMCQDRMHE------------LVVDAYKKAVSGKEAAAAAPAWKDVMEKGFARMDD-----EATIWAKSRTGGEPACRCELQTPARCDHV-------GSTAVVAVVGPNRVVVANSGDSRAVLCRAGVPVPLSVDHKPDRPDELERIKAAGGRVIYWDGARVLGVLAMSRAIGDGYL---------KPYVTSEPEVTVTERADDDECLILASDGLWDVVTNE 328          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C09_ORYSJ (Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.773e-29
Identity = 91/266 (34.21%), Postives = 136/266 (51.13%), Query Frame = 2
Query:   89 RYGLSSMQGWRATMEDAHAAYPDLDSSTS---FFGVYDGHGGKAVAKFCAKYLHQQVLK-HEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            RYG++++ G R  MEDA +  PD   ++    F+GV+DGHG   VA  C   +H+ V + H   ++G++                    WR      D M+K    ++G + +     ++D       ++ P    H   +GSTA VA++   Q+VVANAGDSR V+SR G  + LS DHKPD   E +RI  AGG   +    RV G L ++RAIGD            K  VT+ P+++  E  DDDE L++A DG+WD + ++
Sbjct:   99 RYGVTAVCGRRREMEDAVSIRPDFLPASGKFHFYGVFDGHGCSHVATTCQDRMHEIVAEEHNKGASGEVAP------------------WR------DVMEKSFARMDGEVGNRASTRSDDEPACPCEQQTPSRRDH---AGSTAVVAVVSPTQVVVANAGDSRAVISRAGVPVALSVDHKPDRPDELERIEAAGGRVIYWDGARVLGVLAMSRAIGDGYL---------KPYVTSEPEVTVTERTDDDECLILASDGLWDVVTNE 328          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C22_ARATH (Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana GN=At2g25620 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.847e-29
Identity = 87/271 (32.10%), Postives = 136/271 (50.18%), Query Frame = 2
Query:   89 RYGLSSMQGWRATMEDAHAAYPDLDSS----------TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGD--VEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            R G  S  G R++MEDA+    +   S          ++F+GV+DGHGGK  A+F   ++ + +++ + + + ++      AFL+ D                                         F +  S +G  +      SG+TA  AI+  + LVVANAGD R VLSR+G+A+ +S+DHKP    E+ RI  +GG +  G +NG LN+ARA+GD  +E    K   ++   + A P++ T +L ++DEFL+I CDG+WD   SQ
Sbjct:   89 RSGAWSDIGSRSSMEDAYLCVDNFMDSFGLLNSEAGPSAFYGVFDGHGGKHAAEFACHHIPRYIVEDQEFPS-EINKVLSSAFLQTDTA---------------------------------------FLEACSLDGSLA------SGTTALAAILFGRSLVVANAGDCRAVLSRQGKAIEMSRDHKPMSSKERRRIEASGGHVFDGYLNGQLNVARALGDFHMEGMKKKKDGSDCGPLIAEPELMTTKLTEEDEFLIIGCDGVWDVFMSQ 313          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C47_ARATH (Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.286e-28
Identity = 83/264 (31.44%), Postives = 130/264 (49.24%), Query Frame = 2
Query:   89 RYGLSSMQGWRATMEDAHAAYPDL-----DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            R G  S +G + +MED      DL      S+ +F+GV+DGHGG   A F  K + + V++ + +       + + AF++ D  +               +D+                                     +SG+TA  A+I DK +++ANAGDSR VL ++G+A+ LSKDHKP+   E+ RI K GG I  G +NG L++ARA+GD   K  K        ++  P++  I L ++DE+L++ CDG+WD + SQ
Sbjct:   72 RSGSWSDKGPKQSMEDEFICVDDLTEYIGSSTGAFYGVFDGHGGVDAASFTKKNIMKLVMEDKHFPTSTK-KATRSAFVKTDHALAD----------ASSLDR-------------------------------------SSGTTALTALILDKTMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGTKGSLCP---LSCEPELEEIVLTEEDEYLIMGCDGLWDVMSSQ 284          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C27_ARATH (Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.286e-28
Identity = 87/269 (32.34%), Postives = 129/269 (47.96%), Query Frame = 2
Query:   89 RYGLSSMQGWRATMEDAHAAYPDL----------DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            R G  + QG +  MED H    DL           S  +F+GV+DGHGG   A F  K + + +++  ++    +  + + AFL+ D                                         F D +S +         +SG+TA  A I  ++L++ANAGD R VL R+G+A+ LSKDHKP+   EK RI K GG +  G +NG L++ARAIGD   K  K        ++  P++   +L +DDEFL++ CDG+WD + SQ
Sbjct:   84 RSGSCAEQGAKQFMEDEHICIDDLVNHLGAAIQCSSLGAFYGVFDGHGGTDAAHFVRKNILRFIVEDSSFPLC-VKKAIKSAFLKADY---------------------------------------EFADDSSLD--------ISSGTTALTAFIFGRRLIIANAGDCRAVLGRRGRAIELSKDHKPNCTAEKVRIEKLGGVVYDGYLNGQLSVARAIGDWHMKGPKGSACP---LSPEPELQETDLSEDDEFLIMGCDGLWDVMSSQ 301          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C02_ORYSJ (Probable protein phosphatase 2C 2 OS=Oryza sativa subsp. japonica GN=Os01g0295700 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.742e-28
Identity = 87/280 (31.07%), Postives = 129/280 (46.07%), Query Frame = 2
Query:   83 NVRYGLSSMQGWRATMEDAHAAYPDLD----------SSTSFFGVYDGHGGKAVAKFCAKYLHQ---------QVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            N+R G  +  G R  MED H    DL           +  +F+GV+DGHGG   A +  ++  +         Q L+ +      +  S   AFL  D  +       +LAI                                            +SG+TA  A+I  +QL+VANAGD R VL RKG A+ +S+DH+P  + E +RI + GG+I+ G +NG L++ RA+GD + K+ +     +  + A P+     L +DDEFL+I CDGIWD + SQ
Sbjct:   67 NIRSGSFADIGPRRYMEDEHIRIDDLSGHLGSLLMCPAPNAFYGVFDGHGGPDAAAYMKRHAIRLFFEDSEFPQALEEDESFYESVEKSIHNAFLSADLALAD-----DLAI------------------------------------------SRSSGTTALAALIFGRQLLVANAGDCRAVLCRKGVAVEMSRDHRPTYDAEHERITECGGYIEDGYLNGVLSVTRALGDWDMKMPQ---GSRSPLIAEPEFQQTTLTEDDEFLIIGCDGIWDVMSSQ 296          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C30_ORYSJ (Probable protein phosphatase 2C 30 OS=Oryza sativa subsp. japonica GN=Os03g0268600 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.887e-28
Identity = 98/271 (36.16%), Postives = 133/271 (49.08%), Query Frame = 2
Query:   65 EDGQNENVRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCD-DDEFLVIACDGIWDCLFSQ 865
            ED + E  RYG +S+ G R  MED+ +A P       FFGV+DGHG   VA  C + +H+ V+     +AG            +DE  R    WR     G     F+ M    + S +G  A         +  P  D      GSTA VA++  + +VVAN GDSR VL R G A+ LS DHKPD   E +RI  AGG   F    RV G L ++RAIGD            K  V  +P++  +E  D +DEFL++A DG+WD + ++
Sbjct:   69 EDREVERARYGFTSVCGRRRDMEDSVSACPGFLPGHHFFGVFDGHGCSHVATSCGQRMHEIVVDEAGAAAGSA---------GLDEEAR----WR-----GVMERSFARMDAEAVASSRGSVAPAPTCRCEMQL-PKCDH----VGSTAVVAVLGPRHVVVANCGDSRAVLCRGGAAIPLSCDHKPDRPDELERIHAAGGRVIFWDGARVFGMLAMSRAIGDSYL---------KPYVICDPEVRVMERKDGEDEFLILASDGLWDVVSNE 307          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C24_ARATH (Probable protein phosphatase 2C 24 OS=Arabidopsis thaliana GN=At2g29380 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.887e-28
Identity = 101/293 (34.47%), Postives = 140/293 (47.78%), Query Frame = 2
Query:   32 YLSTPKTEKFSEDGQNENV---RYGLSSMQGWRATMEDAHAAYPDLDSSTS------FFGVYDGHGGKAVAKFCAKYLH---QQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            Y S P++ +     QN +V   RYG+SS+ G R  MEDA A +P   S  +      +FGVYDGHG   VA  C + LH   Q+ L  +     +  T+ +++F RMD+                         E   W      AN   D  T    P  D    + GSTA V++I   ++VVAN GDSR VL R G+ + LS DHKPD   E DRI  AGG   +    RV G L ++RAIGD            K  V+  P+++  +  DDD  L++A DG+WD + ++
Sbjct:   55 YSSIPRSSREDFSDQNVDVSSPRYGVSSVCGRRREMEDAVAIHPSFSSPKNSEFPQHYFGVYDGHGCSHVAARCRERLHKLVQEELSSDMEDEEEWKTTMERSFTRMDK-------------------------EVVSWGDSVVTANCKCDLQT----PACD----SVGSTAVVSVITPDKIVVANCGDSRAVLCRNGKPVPLSTDHKPDRPDELDRIEGAGGRVIYWDCPRVLGVLAMSRAIGDNYL---------KPYVSCEPEVTITDRRDDD-CLILASDGLWDVVSNE 304          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C14_ARATH (Probable protein phosphatase 2C 14 OS=Arabidopsis thaliana GN=At1g67820 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 8.336e-28
Identity = 89/267 (33.33%), Postives = 126/267 (47.19%), Query Frame = 2
Query:   92 YGLSSMQGWRATMEDAHAAYPDL--DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAG--DLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ----VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            +G+ S  G +  MED H   P L  +S  SFFGVYDGHGG   A+F A+ LH+ V++      G  + V + + AFLR D                D ++K                                   G  SG+    A+I+D++++V+N GD R VL R G A  L+ DHKP  + EK+RI   GG++       RV G L ++R+IGD            K+ V A P+   +EL  D EFLV+A DG+WD + +QE
Sbjct:  121 FGVVSRNGKKKFMEDTHRIVPCLVGNSKKSFFGVYDGHGGAKAAEFVAENLHKYVVEMMENCKGKEEKVEAFKAAFLRTDR---------------DFLEK-----------------------------------GVVSGACCVTAVIQDQEMIVSNLGDCRAVLCRAGVAEALTDDHKPGRDDEKERIESQGGYVDNHQGAWRVQGILAVSRSIGDAHL---------KKWVVAEPETRVLELEQDMEFLVLASDGLWDVVSNQE 328          
The following BLAST results are available for this feature:
BLAST of CV884346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
PPMBL_HUMAN1.052e-3033.33Probable protein phosphatase 1B-like OS=Homo sapie... [more]
P2C49_ORYSJ3.998e-3037.27Probable protein phosphatase 2C 49 OS=Oryza sativa... [more]
P2C09_ORYSJ5.773e-2934.21Probable protein phosphatase 2C 9 OS=Oryza sativa ... [more]
P2C22_ARATH9.847e-2932.10Probable protein phosphatase 2C 22 OS=Arabidopsis ... [more]
P2C47_ARATH1.286e-2831.44Probable protein phosphatase 2C 47 OS=Arabidopsis ... [more]
P2C27_ARATH1.286e-2832.34Probable protein phosphatase 2C 27 OS=Arabidopsis ... [more]
P2C02_ORYSJ3.742e-2831.07Probable protein phosphatase 2C 2 OS=Oryza sativa ... [more]
P2C30_ORYSJ4.887e-2836.16Probable protein phosphatase 2C 30 OS=Oryza sativa... [more]
P2C24_ARATH4.887e-2834.47Probable protein phosphatase 2C 24 OS=Arabidopsis ... [more]
P2C14_ARATH8.336e-2833.33Probable protein phosphatase 2C 14 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G12_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T3_G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884346 ID=CV884346; Name=CV884346; organism=Citrus sinensis; type=EST; length=871bp
CTCTCTGCTCAAAGTAAAGAAAATGGGGGTATATCTGAGCACCCCCAAGA
CTGAGAAGTTCTCGGAGGATGGTCAAAATGAGAATGTTCGATATGGATTG
TCGTCGATGCAGGGGTGGCGTGCGACCATGGAAGATGCTCATGCAGCTTA
TCCAGATTTGGACAGTTCTACATCTTTCTTTGGTGTTTATGATGGCCACG
GTGGTAAAGCAGTGGCCAAATTTTGTGCCAAGTATCTTCACCAGCAGGTG
CTCAAACATGAAGCTTATTCAGCTGGAGATTTAGTCACTTCAGCACAGAA
AGCTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGGGGATGGAGAG
AATTAGCTATACTGGGAGATAAAATGGACAAGTTTTCTGGCATGATTGAG
GGGTTCATATGGTCTCCTAAGGGTGGTGAAGCCAATGATCATTTTGACGA
TTGGACATCGGAGGAGGGTCCTCACTCAGATTTTCATGGACCAACTTCTG
GAAGTACAGCTTGCGTAGCAATCATTAGAGACAAGCAACTCGTGGTTGCA
AATGCTGGTGATTCTCGTTGTGTGTTATCGAGGAAGGGCCAGGCACTTAA
TCTATCTAAAGACCATAAGCCTGATCTTGAGGTTGAGAAAGATAGAATTC
TCAAAGCTGGTGGTTTTATACAAGTTGGACGTGTTAATGGAAGTTTAAAT
TTGGCGAGAGCTATTGGAGATGTGGAGTTCAAGCTAAACAAAAGTTTGCC
TGCTGAAAAACAGATTGTGACTGCCAATCCTGATATAAGTACTATTGAAC
TTTGTGATGACGATGAGTTTCTTGTCATAGCTTGTGATGGGATTTGGGAT
TGCCTTTTCAGTCAAGAACTT
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