CV884346

Overview
NameCV884346
Unique NameCV884346
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C03_ARATH (Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.089e-27
Identity = 94/272 (34.56%), Postives = 134/272 (49.26%), Query Frame = 2
Query:   89 RYGLSSMQGWRATMEDAHAAYPDLDSSTS--------FFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYS--AGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            RYG++S+ G R  MEDA A +P      +        +FGVYDGHG   VA  C + LH+ V + EA S    +     +++F RMD+                         E   W      AN   +  T    P  D      GSTA V++I  ++++VAN GDSR VL R G+A+ LS DHKPD   E DRI +AGG   +    RV G L ++RAIGD            K  VT+ P+++  +  ++DEFL++A DG+WD + ++
Sbjct:  120 RYGVASVCGRRRDMEDAVALHPSFVRKQTEFSRTRWHYFGVYDGHGCSHVAARCKERLHELV-QEEALSDKKEEWKKMMERSFTRMDK-------------------------EVVRWGETVMSANCRCELQT----PDCD----AVGSTAVVSVITPEKIIVANCGDSRAVLCRNGKAVPLSTDHKPDRPDELDRIQEAGGRVIYWDGARVLGVLAMSRAIGDNYL---------KPYVTSEPEVTVTDRTEEDEFLILATDGLWDVVTNE 348          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C57_ORYSJ (Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.425e-27
Identity = 87/270 (32.22%), Postives = 127/270 (47.04%), Query Frame = 2
Query:   86 VRYGLSSMQGWRATMEDAHAAYPDL----------DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            VR G  +  G R TMED      +L          D  ++F+GV+DGHGGK  A F    L + +++ E +   ++  +   AFL+ D            A   D     S +                                  SG+TA  A++  + L+VANAGD R VL  +G+A+ +S+DHKP    EK RI  +GG++  G +NG LN+ARAIGD   +  K+      + +A P++    L ++DEFL+I CDGIWD   SQ
Sbjct:   66 VRSGGWADIGSRHTMEDVFICSDNLMKEFGVESFEDGPSAFYGVFDGHGGKHAADFVCSNLARFIVEDEDFPR-EIEKALSSAFLQTD------------AAFADACSVNSSL---------------------------------ASGTTALAALVVGRSLLVANAGDCRAVLCCRGKAIEMSRDHKPSCNREKVRIEASGGYVYDGYLNGQLNVARAIGDWHMEGMKACDGLGPL-SAEPEVMIRNLTEEDEFLIIGCDGIWDVFRSQ 288          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.572e-26
Identity = 92/288 (31.94%), Postives = 134/288 (46.53%), Query Frame = 2
Query:   32 YLSTPKTEKFSEDG----QNENVRYGLSSMQGWRATMEDAHAAYPDLDSS--TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            Y + P+T +    G    QN    YG +S  G R++MED      D  +      FGV+DGHGG   A++  ++L   ++ H  +     ++  + A                                         +A +H D   SE     + H   +GSTA  AI+   +LVVAN GDSR V+SR G+A+ +S+DHKPD   E++RI  AGGF+      RV G L ++RA GD            KQ V A+P+I   ++ D  EFL++A DG+WD +FS E
Sbjct:   10 YSNQPQTVEAPASGGGLSQNGKFSYGYASSAGKRSSMEDFFETRIDGINGEIVGLFGVFDGHGGARAAEYVKRHLFSNLITHPKF-----ISDTKSAIT---------------------------------------DAYNHTD---SELLKSENSHNRDAGSTASTAILVGDRLVVANVGDSRAVISRGGKAIAVSRDHKPDQSDERERIENAGGFVMWAGTWRVGGVLAVSRAFGD---------RLLKQYVVADPEIQEEKIDDTLEFLILASDGLWD-VFSNE 240          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C51_ORYSJ (Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.502e-26
Identity = 97/288 (33.68%), Postives = 131/288 (45.49%), Query Frame = 2
Query:   86 VRYGLSSMQGWRATMEDAHAAYPDLDSSTS---------------FFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRG------WRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGP----TSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            V +G  S+ G R  MEDA A      +ST                FF VYDGHGG  VA+ C K +H              V  A++  LR    +RGQ        W+E  +      +  G + G +                +   P  D   P    T GSTA VA++  +++VVAN GDSR VLSR G AL LS DHKPD   E +R+  AGG +      RV G L  +R+IGD            K  V+A P++  +E  D DEFL++A DG+WD + ++
Sbjct:   76 VSHGSVSVIGRRREMEDAVAIERTFMASTGDGAGAIRGGGEGEEDFFAVYDGHGGSRVAEACRKRMH--------------VVLAEEVSLRR---LRGQSASGGDVRWKEAMLAS--FARMDGEVVGSV----------------AAAAPRVDGTEPSGFRTVGSTAVVAVVGRRRIVVANCGDSRAVLSRGGVALPLSTDHKPDRPDELERVEAAGGRVINWNGYRVLGVLATSRSIGDYYL---------KPFVSAEPEVRVVERTDKDEFLILASDGLWDVVSNE 319          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C13_ARATH (Probable protein phosphatase 2C 13 OS=Arabidopsis thaliana GN=At1g48040 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.574e-26
Identity = 88/258 (34.11%), Postives = 125/258 (48.45%), Query Frame = 2
Query:  119 RATMEDAHAAYPDLDSS---------TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            R TMED H    DL +          ++F+GV+DGHGG   A F  + L +   +   +     + S   AF  ++E+    R    LA L                            D T   G        + G+TA  A+I  + L+VANAGD R VL R+G A+++S DH+   E E+ RI   GG+ + G +NG L + RAIGD E K N    +   ++ ++P+I  I L +DDEFL++ACDGIWD L SQ
Sbjct:   88 RETMEDEHICIDDLSAHLGSYNFSVPSAFYGVFDGHGGPEAAIFMKENLTRLFFQDAVFPE---MPSIVDAFF-LEELENSHRKAFALADLA-------------------------MADETIVSG--------SCGTTALTALIIGRHLLVANAGDCRAVLCRRGVAVDMSFDHRSTYEPERRRIEDLGGYFEDGYLNGVLAVTRAIGDWELK-NPFTDSSSPLI-SDPEIGQIILTEDDEFLILACDGIWDVLSSQ 306          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C78_ARATH (Probable protein phosphatase 2C 78 OS=Arabidopsis thaliana GN=At5g59220 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.802e-26
Identity = 91/270 (33.70%), Postives = 132/270 (48.89%), Query Frame = 2
Query:   89 RYGLSSMQGWRATMEDAHAAYPDLD------SSTSFF--GVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            +YG++S+ G R  MEDA A +P         SST F   GVYDGHG   VA  C + LH+ V + E  +  D   S  ++F RMD  +        +A+  D   K    ++                       P  D      GSTA V+++  ++++VAN GDSR VL R G+A+ LS DHKPD   E DRI  AGG   +    RV G L ++RAIGD            K  V + P+++  +  + D+FL++A DG+WD + ++
Sbjct:  111 KYGVASVCGRRREMEDAVAVHPFFSRHQTEYSSTGFHYCGVYDGHGCSHVAMKCRERLHELV-REEFEADADWEKSMARSFTRMDMEV--------VALNADGAAKCRCELQR----------------------PDCD----AVGSTAVVSVLTPEKIIVANCGDSRAVLCRNGKAIALSSDHKPDRPDELDRIQAAGGRVIYWDGPRVLGVLAMSRAIGDNYL---------KPYVISRPEVTVTDRANGDDFLILASDGLWDVVSNE 336          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.738e-25
Identity = 88/274 (32.12%), Postives = 131/274 (47.81%), Query Frame = 2
Query:   62 SEDGQNENVRYGLSSMQGWRATMEDAHAAYPDL--DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            SEDG    +  G SS +G RA+MED +        D   S FG++DGHGG   A++  ++L + ++KH  +                           +LAI        S  ++         E++ H DD                GSTA  A++    L VAN GDSR V+S+ G+A+ LS+DHKP+   E+ RI  AGG +      RV G L ++RA G      N+ L   KQ V A+P+I   E+ D+ EFL++A DG+WD + +++
Sbjct:  223 SEDGF---LSCGYSSFRGKRASMEDFYDIKSSKIDDKQISLFGIFDGHGGSRAAEYLKEHLFENLMKHPEFMTNT-----------------------KLAISETYKKTDSEFLDS--------ESHTHRDD----------------GSTASTAVLVGNHLYVANVGDSRAVISKAGKAIALSEDHKPNRSDERKRIESAGGVVMWAGTWRVGGVLAMSRAFG------NRLL---KQFVVADPEIQEQEIDDELEFLILASDGLWDVVPNED 437          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.738e-25
Identity = 85/270 (31.48%), Postives = 124/270 (45.93%), Query Frame = 2
Query:   86 VRYGLSSMQGWRATMEDAHAAYPDL----------DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            +R G  S  G R  MEDAH    DL          D   SF+GV+DGHGGK  A +    L  +V+  +A    +L    +++F++ D                                              +E   H +    +SG+TA  A+I  + L+VANAGD R VLSR+G A+ +SKDH+     E+ RI   GG++  G +NG L + RA+GD   +  K +      ++A P++  I L  +DEFL+I  DGIWD   +Q
Sbjct:   53 IRSGDWSDIGGRDYMEDAHVCISDLANNFGHNSVDDEIISFYGVFDGHGGKDAAHYVRDNL-PRVIVEDADFPLELEKVVRRSFVQTDSQF-------------------------------------------AERCSHQN--ALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGTAIEMSKDHRTCCLNERKRIESLGGYVDDGYLNGQLAVTRALGDWHLEGLKEVGEPGGPLSAEPELKMITLTKEDEFLIIGSDGIWDFFSNQ 276          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.270e-25
Identity = 85/271 (31.37%), Postives = 126/271 (46.49%), Query Frame = 2
Query:   74 QNENVRYGLSSMQGWRATMEDAHAAYPD-LDSS-TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMD-EMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            QN    YG +S  G R++MED      D +D      FGV+DGHGG   A++  ++L   ++ H  + + D  ++   A+   D E+++ +                                N H  D               +GSTA  AI+   +L+VAN GDSR V+ R G A  +S+DHKPD   E++RI  AGGF+      RV G L ++RA GD            KQ V A+P+I   ++ D  EFL++A DG+WD   ++E
Sbjct:   28 QNGKFSYGYASSAGKRSSMEDFFETRIDGIDGEIVGLFGVFDGHGGSRAAEYVKRHLFSNLITHPKFIS-DTKSAIADAYTHTDSELLKSE--------------------------------NSHTRD---------------AGSTASTAILVGDRLLVANVGDSRAVICRGGNAFAVSRDHKPDQSDERERIENAGGFVMWAGTWRVGGVLAVSRAFGD---------RLLKQYVVADPEIQEEKIDDSLEFLILASDGLWDVFSNEE 241          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.965e-25
Identity = 91/270 (33.70%), Postives = 126/270 (46.67%), Query Frame = 2
Query:   74 QNENVRYGLSSMQGWRATMEDAHAAYPD-LDSST-SFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            +N    YG +S  G RA+MED +    D +D  T   FGV+DGHGG   A++  ++L   ++KH                                        KF   I+  I      E  +H D   SE       H   +GSTA  AI+   +L+VAN GDSR V+ R G A+ +S+DHKPD   E+ RI  AGGF+      RV G L ++RA GD      K L   KQ V A+P+I    +    EFL++A DG+WD + ++E
Sbjct:   77 ENGKFSYGYASAPGKRASMEDFYETRIDGVDGETIGLFGVFDGHGGARAAEYVKQHLFSNLIKHP---------------------------------------KFISDIKSAI-----AETYNHTD---SEFLKAESSHTRDAGSTASTAILVGDRLLVANVGDSRAVVCRGGDAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD------KLL---KQYVVADPEIKEEIVDSSLEFLILASDGLWDVVSNKE 290          
The following BLAST results are available for this feature:
BLAST of CV884346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
P2C03_ARATH1.089e-2734.56Protein phosphatase 2C 3 OS=Arabidopsis thaliana G... [more]
P2C57_ORYSJ2.425e-2732.22Probable protein phosphatase 2C 57 OS=Oryza sativa... [more]
P2C69_ARATH1.572e-2631.94Probable protein phosphatase 2C 69 OS=Arabidopsis ... [more]
P2C51_ORYSJ3.502e-2633.68Probable protein phosphatase 2C 51 OS=Oryza sativa... [more]
P2C13_ARATH4.574e-2634.11Probable protein phosphatase 2C 13 OS=Arabidopsis ... [more]
P2C78_ARATH7.802e-2633.70Probable protein phosphatase 2C 78 OS=Arabidopsis ... [more]
P2C52_ORYSJ1.738e-2532.12Probable protein phosphatase 2C 52 OS=Oryza sativa... [more]
P2C27_ORYSJ1.738e-2531.48Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]
P2C71_ARATH2.270e-2531.37Probable protein phosphatase 2C 71 OS=Arabidopsis ... [more]
P2C10_ORYSJ2.965e-2533.70Probable protein phosphatase 2C 10 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G12_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T3_G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884346 ID=CV884346; Name=CV884346; organism=Citrus sinensis; type=EST; length=871bp
CTCTCTGCTCAAAGTAAAGAAAATGGGGGTATATCTGAGCACCCCCAAGA
CTGAGAAGTTCTCGGAGGATGGTCAAAATGAGAATGTTCGATATGGATTG
TCGTCGATGCAGGGGTGGCGTGCGACCATGGAAGATGCTCATGCAGCTTA
TCCAGATTTGGACAGTTCTACATCTTTCTTTGGTGTTTATGATGGCCACG
GTGGTAAAGCAGTGGCCAAATTTTGTGCCAAGTATCTTCACCAGCAGGTG
CTCAAACATGAAGCTTATTCAGCTGGAGATTTAGTCACTTCAGCACAGAA
AGCTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGGGGATGGAGAG
AATTAGCTATACTGGGAGATAAAATGGACAAGTTTTCTGGCATGATTGAG
GGGTTCATATGGTCTCCTAAGGGTGGTGAAGCCAATGATCATTTTGACGA
TTGGACATCGGAGGAGGGTCCTCACTCAGATTTTCATGGACCAACTTCTG
GAAGTACAGCTTGCGTAGCAATCATTAGAGACAAGCAACTCGTGGTTGCA
AATGCTGGTGATTCTCGTTGTGTGTTATCGAGGAAGGGCCAGGCACTTAA
TCTATCTAAAGACCATAAGCCTGATCTTGAGGTTGAGAAAGATAGAATTC
TCAAAGCTGGTGGTTTTATACAAGTTGGACGTGTTAATGGAAGTTTAAAT
TTGGCGAGAGCTATTGGAGATGTGGAGTTCAAGCTAAACAAAAGTTTGCC
TGCTGAAAAACAGATTGTGACTGCCAATCCTGATATAAGTACTATTGAAC
TTTGTGATGACGATGAGTTTCTTGTCATAGCTTGTGATGGGATTTGGGAT
TGCCTTTTCAGTCAAGAACTT
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