CV884346

Overview
NameCV884346
Unique NameCV884346
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C47_ORYSJ (Probable protein phosphatase 2C 47 OS=Oryza sativa subsp. japonica GN=Os05g0134200 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.872e-25
Identity = 80/280 (28.57%), Postives = 129/280 (46.07%), Query Frame = 2
Query:   83 NVRYGLSSMQGWRATMEDAHAAYPDLDSS----------TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLV---------TSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            ++R G  +  G R  MED H    DL +           ++F+GV+DGHGG   A +  ++  + + +   +     V          S ++AFL+ D              L D +D                                      +SG+TA  A++  +QL+VANAGD R VL R+G A+ +S+DH+ +   E +R+  +GG+I+ G +NG L++ RA+GD + K+     +    + A P+     L +DDEFL++ CDGIWD + SQ
Sbjct:   74 SIRSGSFADIGPRRYMEDEHIRIDDLSAHLGSLLVCPLPSAFYGVFDGHGGLDAAAYMKRHAMRFLFEDSEFPQASQVDETYVQSVENSVRRAFLQAD------------LALADDLDI-----------------------------------SRSSGTTALTALVFGRQLLVANAGDCRAVLCRRGVAMEMSRDHRANYAEECERVAASGGYIEDGYLNGVLSVTRALGDWDMKMPDGSISP---LIAEPEFRQTMLTEDDEFLIMGCDGIWDVMTSQ 303          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C11_ARATH (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.872e-25
Identity = 93/284 (32.75%), Postives = 134/284 (47.18%), Query Frame = 2
Query:   32 YLSTPKTEKFSEDGQNENVRYGLSSMQGWRATMEDA-HAAYPDLDSS-TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            +L+  +T KFS         YG SS++G RATMED       D++    +FFGV+DGHGG   A++    L + ++ H+     D ++  +KA + +                      F    E ++    G   N                    +GSTA  A +   +L+VAN GDSR V SR G A+ LS DHKPD   E+ RI  AGGFI      RV G L ++RA GD + K    + AE +I     DIST+      EF+V+A DG+W+ L +++
Sbjct:  113 FLAGVRTVKFS---------YGYSSLKGKRATMEDYFETRISDVNGQMVAFFGVFDGHGGARTAEYLKNNLFKNLVSHD-----DFISDTKKAIVEV----------------------FKQTDEEYLIEEAGQPKN--------------------AGSTAATAFLIGDKLIVANVGDSRVVASRNGSAVPLSDDHKPDRSDERQRIEDAGGFIIWAGTWRVGGILAVSRAFGDKQLK--PYVIAEPEI--QEEDISTL------EFIVVASDGLWNVLSNKD 330          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C49_ARATH (Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.057e-25
Identity = 90/281 (32.03%), Postives = 133/281 (47.33%), Query Frame = 2
Query:   86 VRYGLSSMQGWRATMEDAHAAYPDLDSS----------TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYS---------AGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI-QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            +R G  +  G +  MED H    DL S           ++F+ V+DGHGG   A +  +   +   + E +            ++ TS + AFL+ D           LA+                                +E+   SD    + G+TA  A+I  + L+VANAGD R VL RKG+A+++S+DHKP   +E+ R+ ++GGFI   G +N  L + RA+GD + KL       +  + + P+I  I L +DDEFLVI CDGIWD L SQE
Sbjct:   77 IRSGSFADIGPKRNMEDEHIRIDDLSSQVGSLFELPKPSAFYAVFDGHGGPEAAAYVRENAIRFFFEDEQFPQTSEVSSVYVEEVETSLRNAFLQAD-----------LAL--------------------------------AEDCSISD----SCGTTALTALICGRLLMVANAGDCRAVLCRKGRAIDMSEDHKPINLLERRRVEESGGFITNDGYLNEVLAVTRALGDWDLKLPH---GSQSPLISEPEIKQITLTEDDEFLVIGCDGIWDVLTSQE 307          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C54_ORYSJ (Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.127e-24
Identity = 84/273 (30.77%), Postives = 125/273 (45.79%), Query Frame = 2
Query:   83 NVRYGLSSMQGWRATMEDAHAAYPDL----------DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQEL 871
            N+R G  S  G R  MED H    DL          + + SF+GV+DGHGGK  A F    L + +++   +             L +++++R                        F+       A++ F   T            +SG+TA  A+I  + L++ANAGD R VLSR G A+ +S DH+P    EK R+   GG++  G +NG L + RA+GD   +  K        ++A P++  I L  DDEFL+I  DGIWD   +Q +
Sbjct:   63 NIRSGDWSDIGGRQYMEDTHVCITDLAKNFGYQSVDNEAISFYGVFDGHGGKDAAHFVRDNLPRIIVEDADFP------------LELEKVVR----------------------RSFV------HADNQFAKTTL-----------SSGTTALTAMIFGRTLLIANAGDCRAVLSRCGTAIEMSVDHRPCSLSEKLRVESLGGYVDDGYLNGLLGVTRALGDWHLEGMKEAGNPGGPLSAEPELKMITLTKDDEFLIIGSDGIWDVFSNQNV 284          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.471e-24
Identity = 86/273 (31.50%), Postives = 131/273 (47.99%), Query Frame = 2
Query:   62 SEDGQNENVRYGLSSMQGWRATMEDAHAAYPDL--DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            S+DG+   +  G SS +G RA MED +        D+  + FG++DGHGG   A+   K+L + +LKH ++   D  ++  + + + D                D +D                E N + +D                GSTA  AI     + VAN GDSR V+S+ G+A+ LS DHKP+ + E+ RI  AGG +      RV G L ++RA G      N+ L   K+ V A P++   E+ DD EFL++A DG+WD + ++
Sbjct:  109 SDDGR---MSCGYSSFRGRRANMEDFYDIKSSKVDDNQINLFGIFDGHGGSHAAEHLKKHLFENLLKHPSFIT-DTKSAISETYRKTDS---------------DFLD---------------AETNINRED----------------GSTASTAIFVGNHIYVANVGDSRTVMSKAGKAIALSSDHKPNRKDERKRIENAGGVVTWSGTWRVGGVLAMSRAFG------NRFL---KRFVVAEPEVQEQEIDDDLEFLILASDGLWDVVSNE 322          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C07_ARATH (Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.922e-24
Identity = 90/282 (31.91%), Postives = 133/282 (47.16%), Query Frame = 2
Query:   92 YGLSSMQGWRATMEDAHAAYP-------------------DLDSSTS-FFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            +G  S+ G R+ MEDA  A P                    L   TS FFGVYDGHGG  VA +C   +H  + +         +   ++   R +     Q  W ++ +  D   K    ++G I  P  G ++    +  S E         T GSTA VA++    ++V+N GDSR VL R   ++ LS DHKPD E E  RI KAGG +   Q  RV+G L ++R+IGD            +  V  +P+++ +    +DE L++A DG+WD + +QE
Sbjct:  189 WGTISICGGRSEMEDAVRALPHFLKIPIKMLMGDHEGMSPSLPYLTSHFFGVYDGHGGAQVADYCHDRIHSALAEE--------IERIKEELCRRNTGEGRQVQWEKVFV--DCYLKVDDEVKGKINRPVVGSSDRMVLEAVSPE---------TVGSTAVVALVCSSHIIVSNCGDSRAVLLRGKDSMPLSVDHKPDREDEYARIEKAGGKVIQWQGARVSGVLAMSRSIGDQYL---------EPFVIPDPEVTFMPRAREDECLILASDGLWDVMSNQE 442          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C68_ORYSJ (Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.510e-24
Identity = 88/271 (32.47%), Postives = 126/271 (46.49%), Query Frame = 2
Query:   89 RYGLSSMQGWRATMEDAHAAYPDLDSSTS---------FFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            R+G +S+ G R  MEDA +      +  +         F+GV+DGHG   VA  C + +H+ V   E   AG    +A++     + M R         I G + +  S   EG        +  DH                   GSTA VA++ + ++VVAN GDSR VL R G  + LS DHKPD   E +RI  AGG   F +  RV G L ++R+IGD            K  VTA P+++     D DE L++A DG+WD + ++
Sbjct:   74 RHGAASVAGRRREMEDAVSLREAFAAPANGEVAAARCDFYGVFDGHGCSHVADACRERMHELVA--EEMGAGSPAAAAREPASWTETMERSFARMDAEVIAGCRAESGSCRCEG--------QKCDHV------------------GSTAVVAVVEESRVVVANCGDSRAVLCRGGAPVQLSSDHKPDRPDELERIEAAGGRVIFWEGARVLGVLAMSRSIGDAYL---------KPYVTAVPEVTVTGRSDFDECLILASDGLWDVVSNE 307          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C37_ARATH (Protein phosphatase 2C 37 OS=Arabidopsis thaliana GN=PP2CA PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.510e-24
Identity = 88/262 (33.59%), Postives = 128/262 (48.85%), Query Frame = 2
Query:   89 RYGLSSMQGWRATMEDAHAAYPDLDSSTS----FFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQ-KAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG---FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWD 850
            + G +S+ G R  MEDA + +P      S    F+GV+DGHG   VA+ C + LH  V K     A D  T    K+F +MD+ +      RE  ++          + G   S K     +        + P  D      GSTA V+++  ++++V+N GDSR VL R G A+ LS DHKPD   E  RI +AGG   +    RV G L ++RAIGD            K  V  +P+++  +  D+DE L++A DG+WD
Sbjct:  104 KIGTTSVCGRRRDMEDAVSIHPSFLQRNSENHHFYGVFDGHGCSHVAEKCRERLHDIVKKEVEVMASDEWTETMVKSFQKMDKEV----SQRECNLV----------VNGATRSMKNSCRCEL-------QSPQCD----AVGSTAVVSVVTPEKIIVSNCGDSRAVLCRNGVAIPLSVDHKPDRPDELIRIQQAGGRVIYWDGARVLGVLAMSRAIGDNYL---------KPYVIPDPEVTVTDRTDEDECLILASDGLWD 331          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C16_ARATH (Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.281e-24
Identity = 90/283 (31.80%), Postives = 128/283 (45.23%), Query Frame = 2
Query:   92 YGLSSMQGWRATMEDAHAAYPDL--------------------DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQEL 871
            +G  S+QG R+ MEDA A  P                        +  FFGVYDGHGG  VA +C   LH        ++  + +   +    + +     Q  W +  +         G IEG I     G ++   +   SE          T GSTA VA++    +VV+N GDSR VL R  +A+ LS DHKPD E E  RI  AGG +   Q  RV G L ++R+IGD            K  V   P+++ +    +DE L++A DG+WD + +QE+
Sbjct:  190 WGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLH--------FALAEEIERIKDELCKRNTGEGRQVQWDK--VFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASE----------TVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYL---------KPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEV 443          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.592e-24
Identity = 84/269 (31.23%), Postives = 121/269 (44.98%), Query Frame = 2
Query:   77 NENVRYGLSSMQGWRATMEDAHAAYPD-LDSST-SFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            N    YG +S  G R++MED +    D +D  T   FGV+DGHGG   A+F  + L   ++KH    +      A+       E+++ +                                                 H   +GSTA  AI+   +L+VAN GDSR V+ R G A+ +S+DHKPD   E+ RI  AGGF+      RV G L ++RA GD      K L   KQ V A+P+I    +    EFL++A DG+WD + ++E
Sbjct:   60 NGKFSYGYASSPGKRSSMEDFYDTRIDGVDGETVGLFGVFDGHGGARAAEFVKQNLFTNLIKHPKLFSDTKSAIAETYTSTDSELLKAETS-----------------------------------------------HNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGDAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD------KLL---KQYVVADPEIKEEVVDSSLEFLILASDGLWDVVTNEE 272          
The following BLAST results are available for this feature:
BLAST of CV884346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
P2C47_ORYSJ3.872e-2528.57Probable protein phosphatase 2C 47 OS=Oryza sativa... [more]
P2C11_ARATH3.872e-2532.75Probable protein phosphatase 2C 11 OS=Arabidopsis ... [more]
P2C49_ARATH5.057e-2532.03Probable protein phosphatase 2C 49 OS=Arabidopsis ... [more]
P2C54_ORYSJ1.127e-2430.77Probable protein phosphatase 2C 54 OS=Oryza sativa... [more]
P2C07_ORYSJ1.471e-2431.50Probable protein phosphatase 2C 7 OS=Oryza sativa ... [more]
P2C07_ARATH1.922e-2431.91Protein phosphatase 2C 7 OS=Arabidopsis thaliana G... [more]
P2C68_ORYSJ2.510e-2432.47Probable protein phosphatase 2C 68 OS=Oryza sativa... [more]
P2C37_ARATH2.510e-2433.59Protein phosphatase 2C 37 OS=Arabidopsis thaliana ... [more]
P2C16_ARATH4.281e-2431.80Protein phosphatase 2C 16 OS=Arabidopsis thaliana ... [more]
P2C59_ORYSJ5.592e-2431.23Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G12_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T3_G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884346 ID=CV884346; Name=CV884346; organism=Citrus sinensis; type=EST; length=871bp
CTCTCTGCTCAAAGTAAAGAAAATGGGGGTATATCTGAGCACCCCCAAGA
CTGAGAAGTTCTCGGAGGATGGTCAAAATGAGAATGTTCGATATGGATTG
TCGTCGATGCAGGGGTGGCGTGCGACCATGGAAGATGCTCATGCAGCTTA
TCCAGATTTGGACAGTTCTACATCTTTCTTTGGTGTTTATGATGGCCACG
GTGGTAAAGCAGTGGCCAAATTTTGTGCCAAGTATCTTCACCAGCAGGTG
CTCAAACATGAAGCTTATTCAGCTGGAGATTTAGTCACTTCAGCACAGAA
AGCTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGGGGATGGAGAG
AATTAGCTATACTGGGAGATAAAATGGACAAGTTTTCTGGCATGATTGAG
GGGTTCATATGGTCTCCTAAGGGTGGTGAAGCCAATGATCATTTTGACGA
TTGGACATCGGAGGAGGGTCCTCACTCAGATTTTCATGGACCAACTTCTG
GAAGTACAGCTTGCGTAGCAATCATTAGAGACAAGCAACTCGTGGTTGCA
AATGCTGGTGATTCTCGTTGTGTGTTATCGAGGAAGGGCCAGGCACTTAA
TCTATCTAAAGACCATAAGCCTGATCTTGAGGTTGAGAAAGATAGAATTC
TCAAAGCTGGTGGTTTTATACAAGTTGGACGTGTTAATGGAAGTTTAAAT
TTGGCGAGAGCTATTGGAGATGTGGAGTTCAAGCTAAACAAAAGTTTGCC
TGCTGAAAAACAGATTGTGACTGCCAATCCTGATATAAGTACTATTGAAC
TTTGTGATGACGATGAGTTTCTTGTCATAGCTTGTGATGGGATTTGGGAT
TGCCTTTTCAGTCAAGAACTT
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