CV884346

Overview
NameCV884346
Unique NameCV884346
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C75_ARATH (Probable protein phosphatase 2C 75 OS=Arabidopsis thaliana GN=AHG1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.303e-24
Identity = 90/281 (32.03%), Postives = 122/281 (43.42%), Query Frame = 2
Query:   92 YGLSSMQGWRATMEDAHAAYPDL-------DSSTSFFGVYDGHGGKAVAKFCAKYLH--------QQVLKHEAYSAGDLVTSA-----QKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV---GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQ 865
            YG+ S+ G    MED+    P+L            FF VYDGHGG  V+  C+  +H        Q + + E  S  D+V        +++F RMDEM           + G  +   +         P+                         SGSTA  A++    ++VAN GDSR VL R G A+ LS DHKPD   E+ RI  AGG + V    RV G L  +RAIGD            K +V   P+++ +     DE LV+A DG+WD L SQ
Sbjct:  109 YGIVSVMGRSRKMEDSVTVKPNLCKPEVNRQRPVHFFAVYDGHGGSQVSTLCSTTMHTFVKEELEQNLEEEEEGSENDVVERKWRGVMKRSFKRMDEMATST------CVCGTSVPLCN-------CDPR---------------------EAAISGSTAVTAVLTHDHIIVANTGDSRAVLCRNGMAIPLSNDHKPDRPDERARIEAAGGRVLVVDGARVEGILATSRAIGDRYL---------KPMVAWEPEVTFMRRESGDECLVLASDGLWDVLSSQ 346          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.303e-24
Identity = 88/283 (31.10%), Postives = 134/283 (47.35%), Query Frame = 2
Query:   41 TPKTEKFSEDGQNENVRYGLSSMQGWRATMEDAHAAYPDL--DSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACV-AIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI----QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            TP+ E  S   + E   Y +   +G R  MED  +A  +L  D   + FGVYDGHGG   A+F AK L   +L       G++V    ++  +++E ++                             +G  A D   ++  E+           G + CV A+I D  LVVANAGD R VLS  G A  L+ DH+P  + E++RI  +GG++     V R+ GSL ++R IGD            KQ + + P+I+ + +    EFL++A DG+WD + +QE
Sbjct:  108 TPREE--SRAVEREGDGYSVYCKRGKREAMEDRFSAITNLQGDPKQAIFGVYDGHGGPTAAEFAAKNLCSNIL-------GEIVGGRNES--KIEEAVK-----------------------------RGYLATD--SEFLKEKN--------VKGGSCCVTALISDGNLVVANAGDCRAVLSVGGFAEALTSDHRPSRDDERNRIESSGGYVDTFNSVWRIQGSLAVSRGIGDAHL---------KQWIISEPEINILRINPQHEFLILASDGLWDKVSNQE 331          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: PP2C4_YEAST (Protein phosphatase 2C homolog 4 OS=Saccharomyces cerevisiae GN=PTC4 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.538e-24
Identity = 104/335 (31.04%), Postives = 143/335 (42.69%), Query Frame = 2
Query:   23 MGVYLSTPKTEKFSEDGQNENVRYG----------LSSMQGWRATMEDAHAAY------------PDLDS----STSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFS---GMIEGFIWSPKGGEANDHFDDW--TSEEGPHSDFHGPTSGSTACVA-IIRDKQLVVANAGDSRCVLSRKGQALN-LSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFK------------------LNKSLPAEKQIVTANPDISTIEL-CDDDEFLVIACDGIWDCLFSQEL 871
            MG  LS P TEK  E  + +N +            + SMQG+R T EDAH               P +D     S + F V+DGHGG   +KF +   H +     +   G+      K      E           +   +   KF      +EG +        +  F D     +E  +  F   + GSTA VA II ++ L VAN GDSRC+LS K   +  +S DHKP    E  RI   GG + +GRV G L L+RA  D +FK                  L    P ++  VT  PD+   ++    DEFLV+ACDGIWD   +++L
Sbjct:    1 MGQLLSHPLTEKTIEYNEYKNNQASTGIVPRFYNCVGSMQGYRLTQEDAHLIRNENSVVYVRFFNPFIDKYETLSLNVFAVFDGHGGDDCSKFLSGGRHHRDGNGSSNGNGEPNAGLIKWIAYSFE------NHHYTSTTNNDSSKFKRSFNTLEGLV--------SQIFKDAFILQDEELYRHFANSSCGSTAVVACIINEESLYVANCGDSRCILSSKSNGIKTMSFDHKPQHIGELIRINDNGGTVSLGRVGGVLALSRAFSDFQFKRGVTYPHRRTKLTNITQNLTYGTPPQEAQVTVEPDVLMHKIDYSKDEFLVLACDGIWDIYNNKQL 321          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 9.538e-24
Identity = 86/270 (31.85%), Postives = 121/270 (44.81%), Query Frame = 2
Query:   74 QNENVRYGLSSMQGWRATMEDAHAAYPD-LDSST-SFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            QN    YG +S  G RA+MED +    D +D      FGV+DGHGG  VA++  + L   +L+H  + +   V         +D+  +                                         T  E   SD      GSTA  A++   +L VAN GDSR ++ R G A+ +SKDHKPD   E+ RI  AGGF+      RV G L ++RA GD      K L   KQ V  +P+I    +    EFL++A DG+WD + ++E
Sbjct:   22 QNGKFSYGYASSPGKRASMEDFYETRIDSVDGQIIGLFGVFDGHGGAKVAEYVKQNLFSHLLRHPKFISDTKVA--------IDDAYKS----------------------------------------TDSEFLESDSSQNQCGSTASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD------KLL---KQYVVVDPEIREEVIDHSLEFLILASDGLWDVVTNEE 234          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C08_ORYSJ (Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.538e-24
Identity = 96/279 (34.41%), Postives = 130/279 (46.59%), Query Frame = 2
Query:   86 VRYGLSSMQGWRATMEDA-HAAYPDLDSSTS-------------------FFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRE-LAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWD 850
            V +G  S+ G R  MEDA   A P L +S                     FF VYDGHGG  VA+ C + +H  VL  E      L      A +  ++  R    W+E +A    ++D   G          G E  D     T E+         T GSTA VA++  +++VVAN GDSR VLSR G A+ LS DHKPD   E +R+  AGG +      R+ G L  +R+IGD            K  V A P+++ ++  D DEFL++A DG+WD
Sbjct:   89 VSHGAVSVIGRRREMEDAIFVAAPFLAASKEAAVEGSGVAEEEGKEEDEGFFAVYDGHGGSRVAEACRERMHV-VLAEEVRVRRLLQGGGGGADVEDEDRAR----WKEAMAACFTRVDGEVG----------GAEEAD-----TGEQ---------TVGSTAVVAVVGPRRIVVANCGDSRAVLSRGGVAVPLSSDHKPDRPDEMERVEAAGGRVINWNGYRILGVLATSRSIGDYYL---------KPYVIAEPEVTVMDRTDKDEFLILASDGLWD 329          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C57_ARATH (Protein phosphatase 2C 57 OS=Arabidopsis thaliana GN=PPH1 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.246e-23
Identity = 84/286 (29.37%), Postives = 128/286 (44.76%), Query Frame = 2
Query:   86 VRYGLSSMQGWRATMEDAHAAYPDLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKP-----DLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEK-------------------QIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQEL 871
            +R+G +S+QG+R  MED      D   S S+  V+DGH G +  KF  + L+++ +   A  AG L+     A ++                          +I+ F         + +   W    G   D     SGSTA V IIR+    +A+ GDS  VLSR GQ   L+  H+P         E  R+ +AGG+I  GR+ G + ++RA GD+ FK  K+   +K                    +V A PDI  + L  D EF+++A DG+WD + S ++
Sbjct:   58 IRWGYTSVQGFRDEMEDDIVIRSDAVDSFSYAAVFDGHAGSSSVKFLREELYKECVG--ALQAGSLLNGGDFAAIK------------------------EALIKAF------ESVDRNLLKWLEANGDEED----ESGSTATVMIIRNDVSFIAHIGDSCAVLSRSGQIEELTDYHRPYGSSRAAIQEVKRVKEAGGWIVNGRICGDIAVSRAFGDIRFKTKKNDMLKKGVDEGRWSEKFVSRIEFKGDMVVATPDIFQVPLTSDVEFIILASDGLWDYMKSSDV 307          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.627e-23
Identity = 82/270 (30.37%), Postives = 122/270 (45.19%), Query Frame = 2
Query:   74 QNENVRYGLSSMQGWRATMEDAHAAYPD--LDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            QN    YG +S  G R++MED +    D         FGV+DGHGG   A++  + L   +++H  + + D   +   A+ + D                                          +   SE   + D     +GSTA  AI+   +L+VAN GDSR V+ R G A+ +S+DHKPD   E+ RI  AGGF+      RV G L ++RA GD            KQ V A+P+I   ++    EFL++A DG+WD + ++E
Sbjct:   28 QNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIRHPKFIS-DTTAAIADAYNQTDS-----------------------------------------EFLKSENSQNRD-----AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGD---------RLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEE 241          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: P2C56_ARATH (Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.125e-23
Identity = 83/277 (29.96%), Postives = 122/277 (44.04%), Query Frame = 2
Query:   92 YGLSSMQGWRATMEDAHAAYP---------------DLDSSTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFI---QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            YG +S+ G R  MEDA +  P               D  S+  FFGVYDGHGG  VA +C + +H                                     LA+  +   +   + +G  W  K  +A   F+ +   +         T GST+ VA++    + VAN GDSR VL R   AL LS DHKPD E E  RI  AGG +      RV G L ++R+IGD   K +         +  +P+++ ++   +D+ L++A DG+WD +  +E
Sbjct:  129 YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMH-------------------------------------LALAEEIAKEKPMLCDGDTWLEKWKKAL--FNSFLRVDSEIESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPS---------IIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEE 357          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: ILKAP_MOUSE (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Mus musculus GN=Ilkap PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.125e-23
Identity = 84/273 (30.77%), Postives = 128/273 (46.89%), Query Frame = 2
Query:   98 LSSMQGWRATMEDAHAAYPDLDSS----------TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVL------SRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            ++  +G R  M+DAH    D+              S+F V+DGHGG   +KF A+ LHQ +++   +  GD++ S +K   R                    +D F    E F+      +A+     W               GSTA   +  D  L +AN GDSR +L      S+K  AL+LSK+H P    E+ RI KAGG ++ GRV G L ++R+IGD ++K        +  VT+ PDI   +L  +D F+++ACDG++     +E
Sbjct:  111 VAERKGEREEMQDAHVILNDITQECNPPSSLITRVSYFAVFDGHGGIRASKFAAQNLHQNLIRK--FPKGDII-SVEKTVKRC------------------LLDTFKHTDEEFL-----KQASSQKPAWKD-------------GSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVRDGRVLGVLEVSRSIGDGQYK--------RCGVTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEE 336          
BLAST of CV884346 vs. ExPASy Swiss-Prot
Match: ILKAP_RAT (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Rattus norvegicus GN=Ilkap PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.775e-23
Identity = 84/273 (30.77%), Postives = 128/273 (46.89%), Query Frame = 2
Query:   98 LSSMQGWRATMEDAHAAYPDLDSS----------TSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDLVTSAQKAFLRMDEMMRGQRGWRELAILGDKMDKFSGMIEGFIWSPKGGEANDHFDDWTSEEGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVL------SRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLFSQE 868
            ++  +G R  M+DAH    D+              S+F V+DGHGG   +KF A+ LHQ +++   +  GD++ S +K   R                    +D F    E F+      +A+     W               GSTA   +  D  L +AN GDSR +L      S+K  AL+LSK+H P    E+ RI KAGG ++ GRV G L ++R+IGD ++K        +  VT+ PDI   +L  +D F+++ACDG++     +E
Sbjct:  111 VAERKGEREEMQDAHVILNDITQECNPPSSLITRVSYFAVFDGHGGIRASKFAAQNLHQNLIRK--FPKGDVI-SVEKTVKRC------------------LLDTFKHTDEEFL-----KQASSQKPAWKD-------------GSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNVRDGRVLGVLEVSRSIGDGQYK--------RCGVTSVPDIRRCQLTPNDRFILLACDGLFKVFTPEE 336          
The following BLAST results are available for this feature:
BLAST of CV884346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
P2C75_ARATH7.303e-2432.03Probable protein phosphatase 2C 75 OS=Arabidopsis ... [more]
P2C02_ARATH7.303e-2431.10Probable protein phosphatase 2C 2 OS=Arabidopsis t... [more]
PP2C4_YEAST9.538e-2431.04Protein phosphatase 2C homolog 4 OS=Saccharomyces ... [more]
P2C45_ORYSJ9.538e-2431.85Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C08_ORYSJ9.538e-2434.41Probable protein phosphatase 2C 8 OS=Oryza sativa ... [more]
P2C57_ARATH1.246e-2329.37Protein phosphatase 2C 57 OS=Arabidopsis thaliana ... [more]
P2C59_ARATH1.627e-2330.37Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]
P2C56_ARATH2.125e-2329.96Protein phosphatase 2C 56 OS=Arabidopsis thaliana ... [more]
ILKAP_MOUSE2.125e-2330.77Integrin-linked kinase-associated serine/threonine... [more]
ILKAP_RAT2.775e-2330.77Integrin-linked kinase-associated serine/threonine... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G12_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T3_G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884346 ID=CV884346; Name=CV884346; organism=Citrus sinensis; type=EST; length=871bp
CTCTCTGCTCAAAGTAAAGAAAATGGGGGTATATCTGAGCACCCCCAAGA
CTGAGAAGTTCTCGGAGGATGGTCAAAATGAGAATGTTCGATATGGATTG
TCGTCGATGCAGGGGTGGCGTGCGACCATGGAAGATGCTCATGCAGCTTA
TCCAGATTTGGACAGTTCTACATCTTTCTTTGGTGTTTATGATGGCCACG
GTGGTAAAGCAGTGGCCAAATTTTGTGCCAAGTATCTTCACCAGCAGGTG
CTCAAACATGAAGCTTATTCAGCTGGAGATTTAGTCACTTCAGCACAGAA
AGCTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGGGGATGGAGAG
AATTAGCTATACTGGGAGATAAAATGGACAAGTTTTCTGGCATGATTGAG
GGGTTCATATGGTCTCCTAAGGGTGGTGAAGCCAATGATCATTTTGACGA
TTGGACATCGGAGGAGGGTCCTCACTCAGATTTTCATGGACCAACTTCTG
GAAGTACAGCTTGCGTAGCAATCATTAGAGACAAGCAACTCGTGGTTGCA
AATGCTGGTGATTCTCGTTGTGTGTTATCGAGGAAGGGCCAGGCACTTAA
TCTATCTAAAGACCATAAGCCTGATCTTGAGGTTGAGAAAGATAGAATTC
TCAAAGCTGGTGGTTTTATACAAGTTGGACGTGTTAATGGAAGTTTAAAT
TTGGCGAGAGCTATTGGAGATGTGGAGTTCAAGCTAAACAAAAGTTTGCC
TGCTGAAAAACAGATTGTGACTGCCAATCCTGATATAAGTACTATTGAAC
TTTGTGATGACGATGAGTTTCTTGTCATAGCTTGTGATGGGATTTGGGAT
TGCCTTTTCAGTCAAGAACTT
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