CV884343

Overview
NameCV884343
Unique NameCV884343
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: DNJB1_BOVIN (DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 3.437e-23
Identity = 58/148 (39.19%), Postives = 85/148 (57.43%), Query Frame = -2
Query:  401 GEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 844
            G+ +  E K+L + V++G + G KITFP E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  194 GKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 339          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 1.000e-22
Identity = 55/143 (38.46%), Postives = 83/143 (58.04%), Query Frame = -2
Query:  401 QEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 829
            +E+KVL + V+ G + G KITFP E D AP+    DIVF+++ K H  FKR+G DL     +SL +ALCG    +  L G ++ +     E++KP   + IN  G+P+ + P  RG L + F + FP++L+P     L  +LP
Sbjct:  192 KEEKVLRITVKPGWKAGTKITFPQEGDSAPNKTPADIVFIIRDKPHSLFKREGIDLKYTAQISLKQALCGALVSVPTLQGSRIQVNPN-HEIIKPTTTRRINGLGLPVPKEPSRRGDLIVSFDIKFPDTLAPSLQNQLSELLP 333          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEEL (DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=dnj-20 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 8.465e-22
Identity = 60/150 (40.00%), Postives = 88/150 (58.67%), Query Frame = -2
Query:  392 KVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES-LSPDQCKMLETVLPPRT 838
            K++QE KVLEV VE G  NG +  F GE +   +   GD+ F ++ ++HP+F+RKGDDL+   T+SL +AL GF+  I HLDG   ++K Q  +V  P       DEGMP  +    +G L + F V+FP++ LS +Q   +  +L   T
Sbjct:  199 KLVQENKVLEVEVEVGADNGHQQIFHGEGEPHIEGDPGDLKFKIRIQKHPRFERKGDDLYTNVTISLQDALNGFEMEIQHLDGH--IVKVQRDKVTWPGARLRKKDEGMPSLEDNNKKGMLVVTFDVEFPKTELSDEQKAQIIEILQQNT 346          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: PSI1_SCHPO (Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20
Identity = 58/139 (41.73%), Postives = 78/139 (56.12%), Query Frame = -2
Query:  428 IQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKS----QPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQ 832
            ++  ++LE+ V+ G + G KI F GE DE PD    DI FVL +K HP F R GDDL ++  LSL EAL GF   I+ +DG++L + S    QPG  +    F      GMP+ + P  RG + I   V FP  L+P Q
Sbjct:  240 VKADRILEIKVKPGWKAGTKIKFAGEGDEKPDGTVQDIQFVLAEKPHPVFTRSGDDLRMQVELSLKEALLGFSKQISTIDGKKLKVSSSLPTQPGYEITYPGF------GMPLPKNPSQRGNMIIECKVKFPTELTPAQ 372          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: DJB13_MOUSE (DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.723e-20
Identity = 49/139 (35.25%), Postives = 81/139 (58.27%), Query Frame = -2
Query:  404 KVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVL 820
            K+L + V  G + G +ITF  E D+ P+ +  DI+F++++K HP+F+R+ D+LF  + + L +AL      +  LD R  L+     ++V P  FK +  EGMP+ + P  +G L+I F + FP  L+P + +ML   L
Sbjct:  178 KILTIDVRPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRREHDNLFFVYPIPLGKALTCCTVEVKTLDDR--LLNIPINDIVHPKYFKIVPGEGMPLPENPSKKGDLFIFFDIQFPTRLTPQKKQMLRQAL 314          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: DJB13_HUMAN (DnaJ homolog subfamily B member 13 OS=Homo sapiens GN=DNAJB13 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.557e-20
Identity = 48/139 (34.53%), Postives = 82/139 (58.99%), Query Frame = -2
Query:  404 KVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVL 820
            K+L + V+ G + G +ITF  E D+ P+ +  DI+F++++K HP+F+R+ D+LF  + + L +AL      +  LD R  L+     +++ P  FK +  EGMP+ + P  +G L+I F + FP  L+P + +ML   L
Sbjct:  178 KILTIDVKPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRRENDNLFFVNPIPLGKALTCCTVEVRTLDDR--LLNIPINDIIHPKYFKKVPGEGMPLPEDPTKKGDLFIFFDIQFPTRLTPQKKQMLRQAL 314          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: DJB11_PONAB (DnaJ homolog subfamily B member 11 OS=Pongo abelii GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.305e-19
Identity = 49/139 (35.25%), Postives = 82/139 (58.99%), Query Frame = -2
Query:  422 KVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 838
            K++ E++ LEV +E G+++G +  F GE +   D   GD+ F ++  +HP F+R+GDDL+   T+SL E+L GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ +
Sbjct:  200 KLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAR 336          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: DJB11_HUMAN (DnaJ homolog subfamily B member 11 OS=Homo sapiens GN=DNAJB11 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.305e-19
Identity = 49/139 (35.25%), Postives = 82/139 (58.99%), Query Frame = -2
Query:  422 KVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 838
            K++ E++ LEV +E G+++G +  F GE +   D   GD+ F ++  +HP F+R+GDDL+   T+SL E+L GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ +
Sbjct:  200 KLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAR 336          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: DJB11_CANFA (DnaJ homolog subfamily B member 11 OS=Canis familiaris GN=DNAJB11 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.932e-19
Identity = 49/139 (35.25%), Postives = 81/139 (58.27%), Query Frame = -2
Query:  422 KVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 838
            K++ E++ LEV +E G+++G +  F GE +   D   GD+ F ++  +HP F+R+GDDL+   T+SL E+L GF   ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ +
Sbjct:  200 KLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFDMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAR 336          
BLAST of CV884343 vs. ExPASy Swiss-Prot
Match: DJB11_RAT (DnaJ homolog subfamily B member 11 OS=Rattus norvegicus GN=Dnajb11 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19
Identity = 50/139 (35.97%), Postives = 81/139 (58.27%), Query Frame = -2
Query:  422 KVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 838
            K++ E++ LEV +E G+++G +  F GE +   D   GD+ F ++  +H  F+R+GDDL+   T+SL EAL GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ K
Sbjct:  200 KLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGDDLYTNVTVSLVEALVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAK 336          
The following BLAST results are available for this feature:
BLAST of CV884343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
DNJB1_BOVIN3.437e-2339.19DnaJ homolog subfamily B member 1 OS=Bos taurus GN... [more]
DNAJ1_DROME1.000e-2238.46DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
DNJ20_CAEEL8.465e-2240.00DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=d... [more]
PSI1_SCHPO1.222e-2041.73Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 ... [more]
DJB13_MOUSE2.723e-2035.25DnaJ homolog subfamily B member 13 OS=Mus musculus... [more]
DJB13_HUMAN3.557e-2034.53DnaJ homolog subfamily B member 13 OS=Homo sapiens... [more]
DJB11_PONAB2.305e-1935.25DnaJ homolog subfamily B member 11 OS=Pongo abelii... [more]
DJB11_HUMAN2.305e-1935.25DnaJ homolog subfamily B member 11 OS=Homo sapiens... [more]
DJB11_CANFA3.932e-1935.25DnaJ homolog subfamily B member 11 OS=Canis famili... [more]
DJB11_RAT6.708e-1935.97DnaJ homolog subfamily B member 11 OS=Rattus norve... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T7_G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884343 ID=CV884343; Name=CV884343; organism=Citrus sinensis; type=EST; length=845bp
TTTTTTTTTTGTAACACTAAAAATATTAATTATGAGCATTGAGTCTGAAG
GTGCAACGCTAGAATTCCATTACATAGTCAGTTATCAGAAAAACATAAGA
ATAAAGACAGACAAACCAAAACTAGAACCTCTAAAGCCTATAACAGAAAA
TAAATATGTTGAGAATCTTTTTCTCCCAAACAATGAAAATACTAAATCAG
GCCACCCCTTTTCTTCTACATCATCACTGCTGAGCACACTGCACTCTCTG
GGCACCACCTTGCATATCGTCATCTTCATCGTATGCCTCCTGAGCTGCTT
GTTGCTTCCTTCGCATTTCCTCCTCAATGTTCACATCATGCAGGGTTGTT
TCTTCACACTCATCCAGTTCCATATCGGTGAGCTGGACTGAGGTCCTTGG
AGGTAGTACGGTCTCCAGCATCTTGCACTGGTCTGGGCTCAGTGACTCAG
GGAAGTCAACAGTGAAATGAATGTACAGTTTGCCCCTCATAAATGGCCTC
TGATACATAGGCATTCCTTCATCATTTATGGCCTTGAATTGGTCCGGCTT
GACTACTTCCCCAGGCTGGGATTTGATGAGGAGTTGCCGGCCATCCAAAT
GAGTTATTACAAATTGAAAGCCACAGAGAGCTTCTGTCAGTGACAGGGTG
TGCTCAACAAATAGGTCATCACCCTTTCGCTTAAATTTCGGGTGCTCTTT
CTGTTGTAGAACAAATACAATGTCACCTGTGACAGTGTCGGGCGCTTCAT
CAGCTTCTCCAGGGAACGTAATCTTCTGTCCATTTTGCATCCCCTTCTCA
ACAATAACCTCCAAGACTTTTTTCTCCTGAATGACCTTCTCACCC
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